WERAM Information


Tag Content
WERAM ID WERAM-Arl-0010
Ensembl Protein ID Al_scaffold_0005_1636
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Al_scaffold_0005_1636 Al_scaffold_0005_1636 Al_scaffold_0005_1636
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 9.60e-108 361.1 22 319
Organism Arabidopsis lyrata
Domain Profile
  HDAC Class-I

            class-1.txt   7 ydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels...kelkkfnvge. 90 
++++ ++p+ p +++h+Lvl+ygl +++ei +p a + ++++fhs eyi+fl + +p n ++ s ++++ f+++
Al_scaffold_0005_1636 22 FEPE-------IGQPTDPFPSHMAHKLVLTYGLDRHMEISRPYLAGVFDFTQFHSPEYIQFLASLTPMNLKDPSvslNKSRFFDLDVn 102
4433.......4689999999************************************************9955433445555666532 PP
class-1.txt 91 ...dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgv 175
++ +f+glf+yc++++G+sl+aa kLn++eadiainwaGG+h ak+++asGf +vnD+vlai ellk +krvlyidi + hGD v
Al_scaffold_0005_1636 103 rhtNSTIFNGLFDYCRASAGGSLSAAVKLNRREADIAINWAGGMHRAKRDRASGFSFVNDVVLAIAELLKVFKRVLYIDIGFRHGDAV 190
234899********************************************************************************** PP
class-1.txt 176 eeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDr 263
eeafy+tdrvmtvsfh y ++ fP Gd ++ y++ Plk+g++D+s++++f++vi+k +++++Pe+vvlqcGaDslagD
Al_scaffold_0005_1636 191 EEAFYNTDRVMTVSFHTYTDTPFPRDGDRRE-------LYSLKAPLKNGLKDKSLRNLFRPVINKAMQVYQPEVVVLQCGADSLAGDF 271
**************************98665.......69***********************************************5 PP
class-1.txt 264 lgefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
+fnl +kgh+ c+++++sfn+pl+vlGGGG t r vaRcw+yeta+++
Al_scaffold_0005_1636 272 --TFNLKVKGHGACLEYIRSFNVPLMVLGGGGSTFRHVARCWCYETAIAV 319
..8********************************************986 PP

Protein Sequence
(Fasta)
MENTASLVTG PDGRKRRVSY FFEPEIGQPT DPFPSHMAHK LVLTYGLDRH MEISRPYLAG 60
VFDFTQFHSP EYIQFLASLT PMNLKDPSVS LNKSRFFDLD VNRHTNSTIF NGLFDYCRAS 120
AGGSLSAAVK LNRREADIAI NWAGGMHRAK RDRASGFSFV NDVVLAIAEL LKVFKRVLYI 180
DIGFRHGDAV EEAFYNTDRV MTVSFHTYTD TPFPRDGDRR ELYSLKAPLK NGLKDKSLRN 240
LFRPVINKAM QVYQPEVVVL QCGADSLAGD FTFNLKVKGH GACLEYIRSF NVPLMVLGGG 300
GSTFRHVARC WCYETAIAVG VGEQLEEELK VNEFHYKPNF QPDFNTARDI EIIRNGLLRQ 360
LSQLIHVPSV QFQDTPPISE ATEPAEVDME KRQVIQNLRR SKL 403
Nucleotide Sequence
(Fasta)
ATGGAAAATA CGGCGAGCTT AGTGACGGGT CCCGACGGAC GAAAACGGCG AGTGAGCTAC 60
TTCTTCGAGC CAGAGATTGG CCAACCAACG GATCCCTTTC CGAGCCATAT GGCGCACAAG 120
CTCGTCCTCA CATATGGCCT CGACCGCCAC ATGGAAATCA GCCGCCCATA TCTCGCCGGC 180
GTTTTCGATT TCACACAATT CCACTCACCG GAGTATATCC AATTCCTCGC CTCCCTTACG 240
CCGATGAATT TAAAGGATCC TTCCGTCTCG CTTAACAAAA GTCGCTTCTT CGACCTAGAT 300
GTGAACCGGC ACACAAACAG TACTATCTTC AACGGCCTCT TCGATTATTG CCGCGCCTCT 360
GCTGGTGGTT CTTTAAGCGC CGCCGTCAAA TTGAACCGTC GGGAAGCCGA TATTGCTATC 420
AATTGGGCCG GTGGGATGCA CCGTGCCAAG CGTGATCGTG CTTCTGGCTT TAGCTTCGTC 480
AATGACGTTG TGCTTGCGAT TGCCGAGTTG CTCAAGGTTT TCAAGCGAGT TCTCTACATA 540
GATATTGGCT TCCGTCATGG GGATGCAGTG GAAGAAGCAT TTTACAATAC GGATAGAGTT 600
ATGACTGTTT CTTTCCACAC ATATACGGAC ACACCTTTCC CAAGAGACGG AGACAGAAGG 660
GAGTTGTATT CTCTAAAAGC ACCATTAAAG AATGGGCTCA AAGATAAAAG TCTTCGCAAC 720
TTGTTCAGAC CTGTTATCAA CAAGGCAATG CAAGTTTATC AGCCAGAAGT TGTTGTTCTT 780
CAGTGTGGTG CTGATTCATT AGCTGGTGAT TTTACATTCA ACTTGAAAGT CAAGGGTCAC 840
GGTGCTTGTC TCGAGTACAT AAGATCTTTT AATGTTCCTC TCATGGTCTT GGGTGGTGGT 900
GGTTCTACTT TTCGACATGT TGCTCGTTGC TGGTGCTATG AGACAGCGAT TGCGGTTGGG 960
GTTGGGGAAC AACTTGAAGA AGAACTCAAA GTCAATGAGT TTCATTATAA GCCAAACTTC 1020
CAGCCGGATT TTAACACAGC AAGAGATATT GAGATTATAA GGAATGGTTT ACTACGGCAA 1080
CTTTCACAGC TAATACACGT ACCAAGTGTA CAGTTTCAAG ACACTCCACC AATCAGTGAA 1140
GCTACAGAAC CGGCGGAAGT GGACATGGAG AAGAGACAAG TTATACAAAA TTTGAGGCGA 1200
TCCAAGCTAT GA 1213
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0132 AT5G35600.1 Arabidopsis thaliana 61 2e-130 462
WERAM-Bro-0151 Bo8g076790.1 Brassica oleracea 57 2e-128 456
WERAM-Brr-0093 Bra018072.1-P Brassica rapa 57 2e-127 452
WERAM-Thc-0029 EOY20838 Theobroma cacao 55 7e-123 437
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 55 2e-121 432
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 55 2e-121 432
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 53 2e-119 426
WERAM-Prp-0060 EMJ10303 Prunus persica 53 7e-119 424
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 53 1e-118 423
WERAM-Sot-0054 PGSC0003DMT400046818 Solanum tuberosum 52 2e-113 406
WERAM-Met-0068 AES71453 Medicago truncatula 52 2e-113 406
WERAM-Amt-0072 ERN20455 Amborella trichopoda 51 6e-113 404
WERAM-Orr-0094 ORUFI08G12880.1 Oryza rufipogon 52 2e-112 402
WERAM-Brd-0077 BRADI3G22370.1 Brachypodium distachyon 52 5e-112 401
WERAM-Ors-0081 OS08T0344100-01 Oryza sativa 52 6e-112 401
WERAM-Orp-0087 OPUNC08G10650.1 Oryza punctata 52 6e-112 401
WERAM-Orm-0085 OMERI08G09730.1 Oryza meridionalis 52 6e-112 401
WERAM-Ori-0098 BGIOSGA028498-PA Oryza indica 52 6e-112 401
WERAM-Orgl-0088 OGLUM08G12440.1 Oryza glumaepatula 52 6e-112 401
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 52 6e-112 401
WERAM-Sob-0102 Sb07g018230.1 Sorghum bicolor 51 5e-111 398
WERAM-Sei-0051 Si013709m Setaria italica 52 6e-111 398
WERAM-Tra-0274 Traes_6DS_08E9A4EDB.1 Triticum aestivum 50 8e-111 397
WERAM-Zem-0077 GRMZM2G136067_P01 Zea mays 51 1e-110 397
WERAM-Hov-0020 MLOC_17056.1 Hordeum vulgare 51 1e-110 397
WERAM-Orbr-0098 OB08G20020.1 Oryza brachyantha 51 2e-110 396
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 49 5e-110 395
WERAM-Mua-0044 GSMUA_Achr2P06520_001 Musa acuminata 52 2e-100 363
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 48 3e-100 362
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 45 8e-99 357
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 46 9e-99 357
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 46 1e-98 357
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 46 1e-98 357
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 45 5e-98 355
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 45 7e-98 354
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 45 7e-98 354
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 45 7e-98 354
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 45 7e-98 354
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 45 7e-98 354
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 45 8e-98 354
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 45 8e-98 354
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 45 1e-97 354
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 45 1e-97 354
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 45 1e-97 353
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 45 1e-97 353
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 45 1e-97 353
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 45 1e-97 353
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 45 2e-97 353
WERAM-Orni-0044 ONIVA04G29040.1 Oryza nivara 48 1e-96 350
WERAM-Aet-0051 EMT16627 Aegilops tauschii 48 2e-96 350
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 45 3e-96 349
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 47 4e-96 349
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 45 4e-96 349
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 45 4e-96 348
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 45 6e-96 348
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 47 2e-95 347
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 47 2e-95 347
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 46 2e-95 347
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 47 2e-95 346
WERAM-Fia-0005 ENSFALP00000000658.1 Ficedula albicollis 47 6e-95 345
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 45 7e-95 344
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 45 9e-95 344
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 47 1e-94 344
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 47 2e-94 343
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 44 4e-94 342
WERAM-Paa-0044 ENSPANP00000001672.1 Papio anubis 44 4e-94 342
WERAM-Ict-0140 ENSSTOP00000014542.2 Ictidomys tridecemlineatus 44 4e-94 342
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 44 4e-94 342
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 44 5e-94 342
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 44 6e-94 342
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 47 7e-94 341
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 47 1e-93 340
WERAM-Ved-0020 EGY15146 Verticillium dahliae 44 2e-93 340
WERAM-Xet-0020 ENSXETP00000005840.3 Xenopus tropicalis 44 3e-93 339
WERAM-Mod-0086 ENSMODP00000013319.2 Monodelphis domestica 44 3e-93 339
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 45 3e-93 339
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 44 5e-93 338
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 46 5e-93 338
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 45 6e-93 338
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 45 7e-93 338
WERAM-Coi-0024 EAS33504 Coccidioides immitis 45 8e-93 338
WERAM-Dar-0082 ENSDARP00000054625.5 Danio rerio 44 8e-93 338
WERAM-Xim-0002 ENSXMAP00000000390.1 Xiphophorus maculatus 45 9e-93 337
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 45 2e-92 337
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 45 2e-92 337
WERAM-Orn-0087 ENSONIP00000009730.1 Oreochromis niloticus 45 2e-92 337
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 44 2e-92 337
WERAM-Pof-0067 ENSPFOP00000005770.2 Poecilia formosa 45 2e-92 336
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 44 2e-92 336
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 44 2e-92 336
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 44 3e-92 336
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 44 4e-92 335
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 44 6e-92 335
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 46 7e-92 334
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 46 8e-92 334
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 45 8e-92 334
WERAM-Leo-0119 ENSLOCP00000014828.1 Lepisosteus oculatus 44 8e-92 334
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 44 2e-91 333
WERAM-Cis-0077 ENSCSAVP00000016740.1 Ciona savignyi 43 4e-91 332
WERAM-Pem-0092 ENSPMAP00000009670.1 Petromyzon marinus 46 5e-91 332
Created Date 25-Jun-2016