| Tag |
Content |
| WERAM ID |
WERAM-Tra-0029 |
| Ensembl Protein ID |
Traes_1DL_6C6E749C4.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.80e-35 |
124.7 |
21 |
276 |
|
| Organism |
Triticum aestivum |
| Domain Profile |
HDAC Class-I
class-1.txt 50 kasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaakkLnkkeadiainw.aGGlhhakk 136
a+a++ll+fhs eyie l + +++ ++l e + + g + + l +G++l+a++++ +++ +ia hha+
Traes_1DL_6C6E749C4.1 21 PAHASDLLSFHSPEYIEELAQANASGPKKLC---------EGTFLNPGSWGAALLAAGTTLSATRHILDGHGKIAYALvRPPGHHAQP 99
5667777777777777777777666666555.........3334455667778899******************987624567***** PP
class-1.txt 137 seasGfcyvnDivlail.ellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef...fPgtGdlsdvgaekgkyyavnvP 220
++a G+c++n+ la++ l +v +did+h+G+g e fy td v+t+s+h + ++ P +G+ +++g++kg y +n+P
Traes_1DL_6C6E749C4.1 100 DHADGYCFLNNAGLAVQlALDSGRAKVAVVDIDVHYGNGTAEGFYCTDNVLTISLHMKHGTWgpsHPQSGSSDEIGEGKGLGYNLNIP 187
***************9715556899*******************************7665552336889******************* PP
class-1.txt 221 lkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.....nlpllvlGGGGYtlrnvaR 303
l +g D+ ye +++++ + i+ f+P+ +v+ +G Ds + D+ g l+++g+ ++ ++++ + ++l++ GGY + a
Traes_1DL_6C6E749C4.1 188 LPNGSGDKGYEYAMNELVVPAIDKFQPQLLVFVIGQDSSMFDPNGRQCLTMDGYRKIAQLMRGVanrhsDGQMLIVQEGGYHISYSAY 275
************************************************************987642112457**********998887 PP
class-1.txt 304 c 304
c
Traes_1DL_6C6E749C4.1 276 C 276
7 PP
|
Protein Sequence
(Fasta) | MVSILRRGPI APFLSWHSGT PAHASDLLSF HSPEYIEELA QANASGPKKL CEGTFLNPGS 60
WGAALLAAGT TLSATRHILD GHGKIAYALV RPPGHHAQPD HADGYCFLNN AGLAVQLALD 120
SGRAKVAVVD IDVHYGNGTA EGFYCTDNVL TISLHMKHGT WGPSHPQSGS SDEIGEGKGL 180
GYNLNIPLPN GSGDKGYEYA MNELVVPAID KFQPQLLVFV IGQDSSMFDP NGRQCLTMDG 240
YRKIAQLMRG VANRHSDGQM LIVQEGGYHI SYSAYCLHAT LEGVLNLEAP LLDDPIAYYP 300
EDEKYTMKVV DVMKKCWKES IPFLKDI 327Protein Fasta Sequence
>Traes_1DL_6C6E749C4.1|Class-I|Triticum aestivum
MVSILRRGPIAPFLSWHSGTPAHASDLLSFHSPEYIEELAQANASGPKKLCEGTFLNPGSWGAALLAAGTTLSATRHILDGHGKIAYALVRPPGHHAQPDHADGYCFLNNAGLAVQLALDSGRAKVAVVDIDVHYGNGTAEGFYCTDNVLTISLHMKHGTWGPSHPQSGSSDEIGEGKGLGYNLNIPLPNGSGDKGYEYAMNELVVPAIDKFQPQLLVFVIGQDSSMFDPNGRQCLTMDGYRKIAQLMRGVANRHSDGQMLIVQEGGYHISYSAYCLHATLEGVLNLEAPLLDDPIAYYPEDEKYTMKVVDVMKKCWKESIPFLKDI |
Nucleotide Sequence
(Fasta) | CCCGGAGAAC GCCGACCGCG TCCGCAACAT GGTCTCCATC CTCCGCCGCG GGCCCATCGC 60
GCCCTTCCTC TCTTGGCACT CCGGCACCCC CGCCCACGCC AGCGACCTCC TGTCCTTCCA 120
CTCCCCAGAA TACATCGAGG AGCTCGCGCA GGCGAATGCC AGTGGACCCA AGAAGTTATG 180
TGAGGGCACT TTCTTGAACC CTGGTTCATG GGGTGCCGCG CTTCTGGCTG CCGGAACAAC 240
CTTATCAGCT ACGAGGCACA TACTAGATGG GCATGGGAAG ATAGCCTACG CATTGGTCCG 300
TCCCCCTGGC CATCACGCGC AACCGGACCA TGCCGACGGT TACTGCTTTC TGAACAATGC 360
CGGACTTGCT GTGCAGCTGG CTCTGGATTC TGGCCGCGCA AAGGTTGCCG TTGTTGACAT 420
AGATGTGCAC TATGGAAATG GTACTGCGGA GGGCTTCTAT TGCACGGACA ACGTGTTGAC 480
AATCTCTCTT CACATGAAGC ATGGTACTTG GGGTCCTTCG CATCCGCAGA GTGGCTCGTC 540
TGATGAGATT GGGGAAGGCA AGGGGCTTGG GTACAATCTC AATATACCTT TGCCTAATGG 600
CAGTGGGGAT AAAGGCTATG AGTATGCAAT GAATGAATTG GTTGTCCCGG CGATTGACAA 660
GTTTCAACCT CAGCTTTTGG TTTTTGTCAT TGGCCAAGAT TCTAGCATGT TTGATCCAAA 720
TGGAAGACAG TGCTTGACCA TGGATGGTTA CAGGAAAATT GCACAACTAA TGAGGGGTGT 780
GGCTAATCGA CATAGCGATG GGCAAATGTT GATTGTCCAG GAAGGGGGTT ACCACATCAG 840
TTATTCAGCA TACTGTCTGC ATGCGACACT AGAAGGCGTT CTGAATCTTG AGGCCCCGTT 900
GCTGGATGAC CCAATCGCAT ACTATCCAGA GGATGAGAAG TACACCATGA AAGTTGTCGA 960
CGTCATGAAG AAATGCTGGA AAGAATCCAT TCCATTCTTG AAGGACATTT AGAGACGCAC 1020
ACACATCTTC AACACGGCGG CGGCGATGCT CAATTCTGAA TCGTGTCATG CTCTACATTT 1080
ATAGCCTTCT GCTGACCGCA AAGGGTATGT TTATTGGAGC AACTTGAAAA TGGATGCACC 1140
TTCCCTCAAC CCCTGATTCC CCTATAGGTT TGCTGCGTGA TTTGATTTGT AATGGTGTTT 1200
GTTGCTTAAG GTTCAGATGA ATATTCAGGC TTTTCCTTTT TCTTTTAAGA GGGAGAGGAT 1260
GAAATCAGAC CTTTTGCTTG AGCAGTTTGA TCACAGGTCA CAGTAGAACA AGTCCGCAGA 1320
CATCTTTACG CCAACTAGTG GCAAAGTCTT GATCGTCTAG TAAGGGATGT TAGCTGTTAC 1380
CCGTTGAATT GAGAATCTAT TTTTCGTTGC ATGCCGTCCG TTGAATTGAA GAGAGCATAT 1440
ATCTGTTGCA AAA
1454Nucleotide Fasta Sequence
>Traes_1DL_6C6E749C4.1|Class-I|Triticum aestivum
CCCGGAGAACGCCGACCGCGTCCGCAACATGGTCTCCATCCTCCGCCGCGGGCCCATCGCGCCCTTCCTCTCTTGGCACTCCGGCACCCCCGCCCACGCCAGCGACCTCCTGTCCTTCCACTCCCCAGAATACATCGAGGAGCTCGCGCAGGCGAATGCCAGTGGACCCAAGAAGTTATGTGAGGGCACTTTCTTGAACCCTGGTTCATGGGGTGCCGCGCTTCTGGCTGCCGGAACAACCTTATCAGCTACGAGGCACATACTAGATGGGCATGGGAAGATAGCCTACGCATTGGTCCGTCCCCCTGGCCATCACGCGCAACCGGACCATGCCGACGGTTACTGCTTTCTGAACAATGCCGGACTTGCTGTGCAGCTGGCTCTGGATTCTGGCCGCGCAAAGGTTGCCGTTGTTGACATAGATGTGCACTATGGAAATGGTACTGCGGAGGGCTTCTATTGCACGGACAACGTGTTGACAATCTCTCTTCACATGAAGCATGGTACTTGGGGTCCTTCGCATCCGCAGAGTGGCTCGTCTGATGAGATTGGGGAAGGCAAGGGGCTTGGGTACAATCTCAATATACCTTTGCCTAATGGCAGTGGGGATAAAGGCTATGAGTATGCAATGAATGAATTGGTTGTCCCGGCGATTGACAAGTTTCAACCTCAGCTTTTGGTTTTTGTCATTGGCCAAGATTCTAGCATGTTTGATCCAAATGGAAGACAGTGCTTGACCATGGATGGTTACAGGAAAATTGCACAACTAATGAGGGGTGTGGCTAATCGACATAGCGATGGGCAAATGTTGATTGTCCAGGAAGGGGGTTACCACATCAGTTATTCAGCATACTGTCTGCATGCGACACTAGAAGGCGTTCTGAATCTTGAGGCCCCGTTGCTGGATGACCCAATCGCATACTATCCAGAGGATGAGAAGTACACCATGAAAGTTGTCGACGTCATGAAGAAATGCTGGAAAGAATCCATTCCATTCTTGAAGGACATTTAGAGACGCACACACATCTTCAACACGGCGGCGGCGATGCTCAATTCTGAATCGTGTCATGCTCTACATTTATAGCCTTCTGCTGACCGCAAAGGGTATGTTTATTGGAGCAACTTGAAAATGGATGCACCTTCCCTCAACCCCTGATTCCCCTATAGGTTTGCTGCGTGATTTGATTTGTAATGGTGTTTGTTGCTTAAGGTTCAGATGAATATTCAGGCTTTTCCTTTTTCTTTTAAGAGGGAGAGGATGAAATCAGACCTTTTGCTTGAGCAGTTTGATCACAGGTCACAGTAGAACAAGTCCGCAGACATCTTTACGCCAACTAGTGGCAAAGTCTTGATCGTCTAGTAAGGGATGTTAGCTGTTACCCGTTGAATTGAGAATCTATTTTTCGTTGCATGCCGTCCGTTGAATTGAAGAGAGCATATATCTGTTGCAAAA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
