WERAM Information

Tag Content
WERAM ID WERAM-Pot-0131
Ensembl Protein ID POPTR_0012s08570.1
Gene Name POPTR_0012s08570g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0012s08570 POPTR_0012s08570.1 POPTR_0012s08570.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 5.70e-159 529.9 20 333
Organism Populus trichocarpa
Domain Profile
  HDAC Class-I
         class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae..elskelkkfnvg 89 
                         ++v+y+y++++gey+ygq+h+mkp+r++++h+L++ny+l++++ei +p  a  e++  fhs++y+efl++v+p++a+   + ++lk+fn+g
  POPTR_0012s08570.1  20 RRVSYFYEPTIGEYYYGQGHSMKPHRIRMAHNLIINYALHRRMEINRPFPAGPEDIGWFHSDDYVEFLSSVSPQSASdpAHGRQLKRFNIG 110
                         589***********************************************************************999444558******** PP
         class-1.txt  90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafy 180
                         edcPvf glfe+cq+++G+s+  a kLn+++adia+nwaGGlhhak+seasGfcyvnDivl+ilellk hkrvly+did+hhGDgveeafy
  POPTR_0012s08570.1 111 EDCPVFYGLFEFCQASAGGSIGCAVKLNRGDADIALNWAGGLHHAKRSEASGFCYVNDIVLGILELLKVHKRVLYVDIDVHHGDGVEEAFY 201
                         ******************************************************************************************* PP
         class-1.txt 181 ttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsi 271
                         ttdrvmtvsfhkyg+ ffPgtG+++d+g++kgk+ya+n+Plkdg+dDe ++++f+++i+kv+e+++P+avvlqcGaDsl+gDrlg+fnls+
  POPTR_0012s08570.1 202 TTDRVMTVSFHKYGD-FFPGTGHIKDIGVGKGKNYALNIPLKDGMDDECFRALFRPLIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSV 291
                         ***************.*************************************************************************** PP
         class-1.txt 272 kghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                         kgha+c++f++sfn+pl++lGGGGYt+rnvaRcw+yetav++
  POPTR_0012s08570.1 292 KGHADCLRFIRSFNVPLMILGGGGYTIRNVARCWCYETAVAV 333
                         ***************************************986 PP
Protein Sequence
(Fasta)		MLDTNGGASL PSTGTDAEKR RVSYFYEPTI GEYYYGQGHS MKPHRIRMAH NLIINYALHR 60
RMEINRPFPA GPEDIGWFHS DDYVEFLSSV SPQSASDPAH GRQLKRFNIG EDCPVFYGLF 120
EFCQASAGGS IGCAVKLNRG DADIALNWAG GLHHAKRSEA SGFCYVNDIV LGILELLKVH 180
KRVLYVDIDV HHGDGVEEAF YTTDRVMTVS FHKYGDFFPG TGHIKDIGVG KGKNYALNIP 240
LKDGMDDECF RALFRPLIQK VMEVYQPDAV VLQCGADSLS GDRLGCFNLS VKGHADCLRF 300
IRSFNVPLMI LGGGGYTIRN VARCWCYETA VAVGVEPDNK LPYNEYYEYF GPEYTLHADP 360
SNMENLNTPK DMERIRNILL EQLSRLPNAP SVPFQTTPAT TEVPEEDEEN MDQRPKRHVW 420
NGVDYESDHD EDEKPEPGFF
Nucleotide Sequence
(Fasta)		ATGCTGGACA CTAATGGAGG CGCCTCCCTA CCATCAACAG GAACAGACGC AGAAAAACGC 60
CGAGTCAGCT ACTTCTACGA ACCCACAATC GGTGAGTACT ACTACGGTCA AGGCCACTCA 120
ATGAAACCCC ACAGAATCCG AATGGCCCAC AACTTGATAA TCAACTACGC TCTCCACCGT 180
CGGATGGAAA TCAACCGTCC ATTCCCAGCA GGTCCTGAAG ACATAGGGTG GTTCCATTCT 240
GATGATTACG TGGAATTCTT GTCTTCAGTG TCACCACAAT CAGCGAGTGA TCCGGCACAT 300
GGGAGGCAGT TGAAGAGGTT TAATATTGGT GAAGATTGTC CGGTTTTTTA TGGGTTATTT 360
GAGTTTTGTC AGGCCTCTGC TGGTGGCTCA ATTGGCTGTG CTGTTAAGCT TAATAGAGGG 420
GATGCTGATA TTGCTTTGAA TTGGGCTGGT GGCTTACATC ATGCGAAGAG GAGTGAGGCT 480
TCTGGGTTTT GTTATGTTAA TGATATTGTT CTTGGCATTC TTGAGTTGCT CAAAGTTCAT 540
AAGCGTGTAT TGTATGTAGA TATTGATGTC CACCATGGCG ATGGTGTTGA GGAAGCATTC 600
TATACTACTG ACAGGGTTAT GACTGTGTCC TTCCATAAAT ATGGAGATTT CTTTCCAGGG 660
ACGGGGCACA TCAAGGACAT TGGAGTTGGG AAAGGGAAGA ACTATGCCCT GAATATTCCT 720
TTAAAAGATG GGATGGATGA CGAATGTTTC CGTGCTCTGT TTCGGCCACT CATCCAAAAA 780
GTGATGGAGG TTTATCAACC TGATGCAGTT GTTCTCCAAT GTGGAGCAGA TTCATTATCT 840
GGTGATAGGT TGGGGTGTTT CAACCTGTCT GTTAAGGGCC ATGCAGACTG CCTTAGATTT 900
ATTAGATCTT TTAATGTTCC TCTGATGATC TTGGGTGGGG GTGGGTATAC TATCAGGAAT 960
GTTGCCCGTT GCTGGTGCTA TGAGACAGCA GTTGCAGTTG GGGTGGAACC AGATAACAAA 1020
TTGCCTTACA ATGAGTACTA CGAGTACTTT GGCCCTGAAT ACACACTTCA TGCTGACCCA 1080
TCCAATATGG AGAACCTAAA CACACCCAAA GACATGGAGA GAATAAGGAA CATACTGCTA 1140
GAGCAACTTT CTAGACTGCC TAATGCTCCC AGTGTACCTT TTCAGACAAC ACCAGCTACA 1200
ACTGAAGTTC CGGAAGAGGA TGAAGAGAAC ATGGATCAAA GACCAAAGCG TCATGTATGG 1260
AATGGTGTTG ATTATGAGTC TGATCATGAT GAAGATGAGA AACCGGAACC CGGATTTTTC 1320
TGAGATAAGG GAGAAGAAGA CAAGAAAGAG CATCCATGGT TGTGACGGGT GGAAAACAGT 1380
TATTTTCTAG TTTCATTGCT TCTATATCAT GTACAGACCC CCCCTCAACA TGTAGCTTAT 1440
AGTTTCAGAG GATTTCATCT TTGGATGAGC AACCATGTAG ATACTTTTGA CAAATATCAG 1500
TAGAATAGGT AGT 1514
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Thc-0029 EOY20838 Theobroma cacao 84 0.0 778
WERAM-Met-0068 AES71453 Medicago truncatula 84 0.0 776
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 83 0.0 773
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 84 0.0 771
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 82 0.0 763
WERAM-Prp-0060 EMJ10303 Prunus persica 83 0.0 750
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 79 0.0 719
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 79 0.0 716
WERAM-Bro-0056 Bo3g104750.1 Brassica oleracea 78 0.0 711
WERAM-Brr-0193 Bra038607.1-P Brassica rapa 77 0.0 702
WERAM-Sot-0054 PGSC0003DMT400046818 Solanum tuberosum 75 0.0 696
WERAM-Amt-0082 ERN02510 Amborella trichopoda 75 0.0 670
WERAM-Zem-0077 GRMZM2G136067_P01 Zea mays 72 0.0 665
WERAM-Sob-0102 Sb07g018230.1 Sorghum bicolor 72 0.0 662
WERAM-Sei-0051 Si013709m Setaria italica 72 0.0 660
WERAM-Orbr-0098 OB08G20020.1 Oryza brachyantha 71 0.0 660
WERAM-Tra-0274 Traes_6DS_08E9A4EDB.1 Triticum aestivum 71 0.0 657
WERAM-Hov-0020 MLOC_17056.1 Hordeum vulgare 71 0.0 657
WERAM-Orr-0094 ORUFI08G12880.1 Oryza rufipogon 71 0.0 656
WERAM-Ors-0081 OS08T0344100-01 Oryza sativa 70 0.0 655
WERAM-Orp-0087 OPUNC08G10650.1 Oryza punctata 70 0.0 655
WERAM-Orm-0085 OMERI08G09730.1 Oryza meridionalis 70 0.0 655
WERAM-Ori-0098 BGIOSGA028498-PA Oryza indica 70 0.0 655
WERAM-Orgl-0088 OGLUM08G12440.1 Oryza glumaepatula 70 0.0 655
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 70 0.0 655
WERAM-Brd-0077 BRADI3G22370.1 Brachypodium distachyon 70 0.0 652
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 68 1e-180 629
WERAM-Mua-0044 GSMUA_Achr2P06520_001 Musa acuminata 74 2e-169 592
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 62 1e-168 590
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 66 2e-165 579
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 67 2e-163 572
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 66 4e-163 572
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 67 5e-163 571
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 66 6e-163 571
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 66 8e-163 570
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 66 8e-163 570
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 66 8e-163 570
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 66 9e-163 570
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 66 9e-163 570
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 66 9e-163 570
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 66 1e-162 569
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 66 2e-162 569
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 66 2e-162 569
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 66 2e-162 569
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 66 2e-162 569
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 66 2e-162 569
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 66 2e-162 569
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 66 1e-161 566
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 66 2e-161 566
WERAM-Aet-0051 EMT16627 Aegilops tauschii 68 2e-161 566
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 66 2e-161 565
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 66 6e-161 564
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 65 6e-161 564
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 66 7e-161 564
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 66 9e-161 563
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 66 1e-159 560
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 68 2e-159 559
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 67 6e-159 557
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 67 7e-159 557
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 65 1e-158 556
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 67 1e-158 556
WERAM-Orni-0020 ONIVA02G09910.1 Oryza nivara 66 3e-158 555
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 67 3e-158 555
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 66 5e-158 554
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 65 2e-157 552
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 65 5e-157 551
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 65 5e-157 551
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 65 7e-157 551
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 65 7e-157 550
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 65 7e-157 550
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 65 8e-157 550
WERAM-Pof-0067 ENSPFOP00000005770.2 Poecilia formosa 65 1e-156 550
WERAM-Xim-0002 ENSXMAP00000000390.1 Xiphophorus maculatus 64 2e-156 549
WERAM-Orn-0087 ENSONIP00000009730.1 Oreochromis niloticus 64 3e-156 548
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 65 3e-156 548
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 64 4e-156 548
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 64 4e-156 548
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 64 6e-156 548
WERAM-Orla-0151 ENSORLP00000017757.1 Oryzias latipes 64 7e-156 547
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 66 8e-156 547
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 66 1e-155 546
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 64 5e-155 545
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 64 8e-155 544
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 66 6e-154 541
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 66 7e-154 541
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 65 9e-154 540
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 59 3e-153 538
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 60 5e-151 531
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 57 6e-150 528
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 65 7e-150 527
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 59 3e-149 525
WERAM-Coi-0024 EAS33504 Coccidioides immitis 60 1e-148 523
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 57 1e-148 523
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 57 2e-148 523
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 61 2e-148 522
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 66 3e-148 522
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 57 8e-148 520
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 66 1e-147 520
WERAM-Cag-0003 CAG57932 Candida glabrata 59 1e-147 520
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 70 3e-147 519
WERAM-Kop-0004 CAY67954 Komagataella pastoris 58 4e-147 518
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 55 5e-147 518
WERAM-Trr-0017 EGR48353 Trichoderma reesei 57 6e-147 518
WERAM-Trv-0003 EHK19072 Trichoderma virens 57 7e-147 517
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 64 2e-146 516
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 57 2e-146 516
WERAM-Ved-0020 EGY15146 Verticillium dahliae 55 2e-146 516
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 55 3e-146 515
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 58 3e-146 515
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 57 5e-146 514
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 58 2e-145 512
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 55 4e-145 511
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 58 2e-144 509
WERAM-Caa-0018 KGT69072 Candida albicans 59 3e-144 509
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 59 3e-144 509
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 58 5e-144 508
WERAM-Asg-0034 AAS54885 Ashbya gossypii 57 5e-144 508
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 59 3e-143 505
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 60 5e-143 504
WERAM-Nec-0007 EFNCRP00000000997 Neurospora crassa 60 9e-143 504
WERAM-Scj-0003 EEB05565 Schizosaccharomyces japonicus 57 7e-142 501
Created Date 25-Jun-2016