Tag |
Content |
WERAM ID |
WERAM-Orbr-0123 |
Ensembl Protein ID |
OB12G14780.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
2.90e-28 |
100 |
95 |
394 |
|
Organism |
Oryza brachyantha |
Domain Profile |
HDAC Class-I
class-1.txt 15 hygqkhpmkpkrlsltheLvlnygl......skkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf..dglfeycq 103 h +++hp +kr+ + e + +++l s+ lei + + as ++++++hs yi+ l+k + ++e ++ P + + f+ c OB12G14780.1 95 HNKESHPESNKRVPAIVEALEKFELtpklrgSQVLEIQNFQPASLDDVARVHSRSYITGLEKAMSRASDEGL-----IFIEGTGPTYatQTTFHECL 186 456788888888888887777777721112245678889999******************998776655443.....34777777651166788899 PP class-1.txt 104 litGasleaakkLnkkead.......iainwaGGlhhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtvsfh 191 l++Ga ++ ++ + ++ a+ hha + Gfc +i +a +++h +rv+ id+d+hhG+g +afy ++ +s h OB12G14780.1 187 LSAGAGITLVDSVVAASKLgptpplgFALVRP-PGHHAVPEGPMGFCVFGNIAVAARYAQHQHglRRVMIIDFDVHHGNGTCDAFYDDPDIFFLSTH 282 ****9887666555444321111111444444.45*****************99998777755338******************************* PP class-1.txt 192 kygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpl 288 + g +PgtG++++vg+++g ++n+Pl g D ++ f +vi + +++f+P+++++ G D+ a D+l+ ++++ ++ +++ ++l OB12G14780.1 283 QLGS--YPGTGKIHQVGQGNGEGTTLNLPLPGGAGDYAMRCAFDEVIAPAVQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYALAASIRELAAEL 377 ****..9*********************************************************************999887777777777665543 PP class-1.txt 289 .....lvlGGGGYtlrn 300 + GGY+lr OB12G14780.1 378 cggrcVFFLEGGYNLRS 394 11111233346676665 PP
|
Protein Sequence (Fasta) | MEQLWAPSLP VLGGRILPML RHPCVFGSHH PLTCRRFQIN ERNHKHNGCW TAYCLPSDNE 60 VSIPEANGAK KDLALPDSLL RDARILYCTS PAMGHNKESH PESNKRVPAI VEALEKFELT 120 PKLRGSQVLE IQNFQPASLD DVARVHSRSY ITGLEKAMSR ASDEGLIFIE GTGPTYATQT 180 TFHECLLSAG AGITLVDSVV AASKLGPTPP LGFALVRPPG HHAVPEGPMG FCVFGNIAVA 240 ARYAQHQHGL RRVMIIDFDV HHGNGTCDAF YDDPDIFFLS THQLGSYPGT GKIHQVGQGN 300 GEGTTLNLPL PGGAGDYAMR CAFDEVIAPA VQRFKPDIIL VSAGYDAHAL DPLAGLQFTT 360 GTFYALAASI RELAAELCGG RCVFFLEGGY NLRSLSSSVA DTFRAFLGEP SLGAQLDDPA 420 MLYEEPTRKV REAIDKAKHL HSL 443Protein Fasta Sequence
>OB12G14780.1|Class-I|Oryza brachyantha MEQLWAPSLPVLGGRILPMLRHPCVFGSHHPLTCRRFQINERNHKHNGCWTAYCLPSDNEVSIPEANGAKKDLALPDSLLRDARILYCTSPAMGHNKESHPESNKRVPAIVEALEKFELTPKLRGSQVLEIQNFQPASLDDVARVHSRSYITGLEKAMSRASDEGLIFIEGTGPTYATQTTFHECLLSAGAGITLVDSVVAASKLGPTPPLGFALVRPPGHHAVPEGPMGFCVFGNIAVAARYAQHQHGLRRVMIIDFDVHHGNGTCDAFYDDPDIFFLSTHQLGSYPGTGKIHQVGQGNGEGTTLNLPLPGGAGDYAMRCAFDEVIAPAVQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYALAASIRELAAELCGGRCVFFLEGGYNLRSLSSSVADTFRAFLGEPSLGAQLDDPAMLYEEPTRKVREAIDKAKHLHSL
|
Nucleotide Sequence (Fasta) | ATGGAGCAGC TGTGGGCACC GTCTCTTCCG GTTCTTGGAG GAAGGATTTT GCCTATGCTC 60 AGGCATCCCT GTGTCTTTGG CAGTCATCAT CCACTAACCT GTAGAAGGTT TCAAATTAAT 120 GAAAGAAACC ATAAGCATAA TGGGTGTTGG ACTGCATATT GCTTACCAAG TGACAATGAA 180 GTTTCTATTC CAGAAGCAAA TGGTGCTAAA AAAGACTTAG CTTTGCCTGA CAGTTTGCTT 240 CGTGATGCTC GTATTCTGTA TTGTACATCT CCTGCCATGG GTCATAACAA GGAATCACAT 300 CCAGAATCTA ACAAAAGAGT TCCTGCAATA GTTGAAGCTC TCGAAAAATT TGAGCTTACT 360 CCGAAGCTTC GTGGTTCACA GGTTCTTGAA ATTCAAAATT TCCAACCTGC TTCTCTTGAT 420 GATGTTGCAC GAGTTCATTC AAGATCATAC ATAACAGGAC TCGAAAAGGC TATGAGTAGA 480 GCTTCAGACG AAGGTTTGAT ATTCATTGAA GGAACTGGAC CAACATATGC TACACAGACT 540 ACTTTCCATG AGTGTCTCCT TTCAGCTGGT GCTGGAATTA CACTGGTTGA TTCAGTGGTT 600 GCAGCATCCA AGTTGGGGCC AACTCCACCA CTTGGTTTTG CCTTAGTAAG GCCACCAGGA 660 CATCATGCTG TCCCCGAAGG TCCCATGGGC TTTTGTGTCT TTGGGAACAT TGCAGTGGCC 720 GCTCGGTATG CTCAGCATCA GCATGGATTA AGGAGGGTCA TGATAATAGA CTTCGATGTT 780 CACCACGGTA ACGGCACATG TGATGCCTTT TATGACGATC CAGACATATT CTTCCTCTCA 840 ACTCATCAGC TTGGAAGCTA TCCTGGCACT GGCAAGATCC ACCAAGTTGG CCAGGGCAAC 900 GGTGAGGGCA CGACGCTCAA CCTGCCACTG CCTGGTGGCG CAGGCGACTA CGCGATGAGG 960 TGTGCATTTG ATGAGGTTAT TGCTCCAGCA GTGCAGCGGT TCAAGCCTGA TATCATCCTT 1020 GTTTCAGCCG GGTACGACGC GCACGCGCTG GACCCTCTGG CCGGGCTGCA GTTCACGACG 1080 GGGACGTTCT ACGCGCTGGC GGCGAGCATC AGGGAGCTGG CGGCGGAGCT GTGCGGCGGG 1140 CGGTGCGTCT TCTTCCTGGA GGGCGGCTAC AACCTGCGGT CGCTGTCCAG CTCCGTCGCC 1200 GACACCTTCC GCGCGTTCCT CGGCGAGCCC AGCCTCGGCG CGCAGCTCGA CGACCCGGCG 1260 ATGCTGTACG AGGAGCCCAC CCGGAAGGTC AGGGAGGCCA TCGACAAGGC CAAGCACCTC 1320 CACTCGCTCT AG
1333Nucleotide Fasta Sequence
>OB12G14780.1|Class-I|Oryza brachyantha ATGGAGCAGCTGTGGGCACCGTCTCTTCCGGTTCTTGGAGGAAGGATTTTGCCTATGCTCAGGCATCCCTGTGTCTTTGGCAGTCATCATCCACTAACCTGTAGAAGGTTTCAAATTAATGAAAGAAACCATAAGCATAATGGGTGTTGGACTGCATATTGCTTACCAAGTGACAATGAAGTTTCTATTCCAGAAGCAAATGGTGCTAAAAAAGACTTAGCTTTGCCTGACAGTTTGCTTCGTGATGCTCGTATTCTGTATTGTACATCTCCTGCCATGGGTCATAACAAGGAATCACATCCAGAATCTAACAAAAGAGTTCCTGCAATAGTTGAAGCTCTCGAAAAATTTGAGCTTACTCCGAAGCTTCGTGGTTCACAGGTTCTTGAAATTCAAAATTTCCAACCTGCTTCTCTTGATGATGTTGCACGAGTTCATTCAAGATCATACATAACAGGACTCGAAAAGGCTATGAGTAGAGCTTCAGACGAAGGTTTGATATTCATTGAAGGAACTGGACCAACATATGCTACACAGACTACTTTCCATGAGTGTCTCCTTTCAGCTGGTGCTGGAATTACACTGGTTGATTCAGTGGTTGCAGCATCCAAGTTGGGGCCAACTCCACCACTTGGTTTTGCCTTAGTAAGGCCACCAGGACATCATGCTGTCCCCGAAGGTCCCATGGGCTTTTGTGTCTTTGGGAACATTGCAGTGGCCGCTCGGTATGCTCAGCATCAGCATGGATTAAGGAGGGTCATGATAATAGACTTCGATGTTCACCACGGTAACGGCACATGTGATGCCTTTTATGACGATCCAGACATATTCTTCCTCTCAACTCATCAGCTTGGAAGCTATCCTGGCACTGGCAAGATCCACCAAGTTGGCCAGGGCAACGGTGAGGGCACGACGCTCAACCTGCCACTGCCTGGTGGCGCAGGCGACTACGCGATGAGGTGTGCATTTGATGAGGTTATTGCTCCAGCAGTGCAGCGGTTCAAGCCTGATATCATCCTTGTTTCAGCCGGGTACGACGCGCACGCGCTGGACCCTCTGGCCGGGCTGCAGTTCACGACGGGGACGTTCTACGCGCTGGCGGCGAGCATCAGGGAGCTGGCGGCGGAGCTGTGCGGCGGGCGGTGCGTCTTCTTCCTGGAGGGCGGCTACAACCTGCGGTCGCTGTCCAGCTCCGTCGCCGACACCTTCCGCGCGTTCCTCGGCGAGCCCAGCCTCGGCGCGCAGCTCGACGACCCGGCGATGCTGTACGAGGAGCCCACCCGGAAGGTCAGGGAGGCCATCGACAAGGCCAAGCACCTCCACTCGCTCTAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |