Tag |
Content |
WERAM ID |
WERAM-Lep-0114 |
Ensembl Protein ID |
LPERR12G04530.1 |
Gene Name |
|
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
3.30e-91 |
306.8 |
86 |
402 |
HDAC |
Class-I |
5.10e-27 |
96.2 |
92 |
366 |
|
Organism |
Leersia perrieri |
Domain Profile |
HDAC Class-II
class-2.txt 15 aleenkekhpEkpeRiqailsrlqeaglle.....kleelka.rkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesksikaa 102 a+ +nk+ hpE+ +R+ ai+++l++ +l++ +++e++ + a++++++ vHs+++++ le+a++ + e + + ++ +y+++++++ LPERR12G04530.1 86 AMGHNKDAHPETNKRVPAIVDALEKLELTPkhcgsQILEIQDfEPASLDDVARVHSRSYITGLEKAMSRASDEGLIFIEGTGPTYATQTTFQEC 179 66789999*********************9555555889988799*********************955555555599**************** PP class-2.txt 103 rlavGavlelvdkvlkgel..kn...gfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlyl 191 l++Ga ++lvd+v++++ n gfa+vRPPGHHa ++ +mGFC+f nvavaa+++qq++ +k+++i+D+DvHhGnGt ++fy+dp++++l LPERR12G04530.1 180 LLSAGAGITLVDSVVAASKlgPNpplGFALVRPPGHHAVPEGPMGFCVFGNVAVAARYAQQQHGLKRVMIIDFDVHHGNGTCDAFYDDPDIFFL 273 **************999864433788******************************************************************** PP class-2.txt 192 SlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatlt 285 S+H + gs +p g+g++++vg+g+geg+++N++++gg+ gd ++ af+ev+ p+a++FkPd++lvsaG+Da++ dpl+gl++t+ ++ +l+ LPERR12G04530.1 274 STH--QLGS-YP--GTGKIHQVGQGNGEGTTLNLPLPGGS-GDYAMRCAFDEVIAPAAQSFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLA 361 ***..99**.78..8***********************99.****************************************************9 PP class-2.txt 286 kqllkl....aggrvvlvlEGGynlkaiaeaveavvkaLlg 322 ++++ +ggr+v++lEGGynl++++++v+ +++a lg LPERR12G04530.1 362 ARIREVaaelCGGRCVFFLEGGYNLQSLSSSVADTFRAFLG 402 9988776666*************************999875 PP
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLv......lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf..dglfeycq 103 + hp +kr+ + + + ++ s+ lei + as ++++++hs yi+ l+k + ++e ++ P + + f+ c LPERR12G04530.1 92 DAHPETNKRVPAIVDALekleltPKHCGSQILEIQDFEPASLDDVARVHSRSYITGLEKAMSRASDEGL-----IFIEGTGPTYatQTTFQECL 180 45555555554443333121121344456889999999*******************998776655443.....347777776511678888** PP class-1.txt 104 litGasleaakkLnkkeadiainwaGGl.......hhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtv 188 l++Ga ++ ++ + ++++ n G+ hha + Gfc ++ +a +++h krv+ id+d+hhG+g +afy ++ + LPERR12G04530.1 181 LSAGAGITLVDSVVAA-SKLGPNPPLGFalvrppgHHAVPEGPMGFCVFGNVAVAARYAQQQHglKRVMIIDFDVHHGNGTCDAFYDDPDIFFL 273 *****98877776654.344444333322222333***************9999998777755449**************************** PP class-1.txt 189 sfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282 s h+ g +PgtG++++vg+++g ++n+Pl g D ++ f +vi + + f+P+++++ G D+ a D+l+ ++++ ++ ++ LPERR12G04530.1 274 STHQLGS--YPGTGKIHQVGQGNGEGTTLNLPLPGGSGDYAMRCAFDEVIAPAAQSFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLAARIR 365 *******..9*******************************************************************99999876655555454 PP class-1.txt 283 s 283 + LPERR12G04530.1 366 E 366 4 PP
|
Protein Sequence (Fasta) | MEQLWVPSLP ILGGKILPML RHYCAFGSHH PLTWRSLQNT GRCCIAYCLP RDNEASILDT 60 NSVRKDLALP DNLLRDARIL YCTSPAMGHN KDAHPETNKR VPAIVDALEK LELTPKHCGS 120 QILEIQDFEP ASLDDVARVH SRSYITGLEK AMSRASDEGL IFIEGTGPTY ATQTTFQECL 180 LSAGAGITLV DSVVAASKLG PNPPLGFALV RPPGHHAVPE GPMGFCVFGN VAVAARYAQQ 240 QHGLKRVMII DFDVHHGNGT CDAFYDDPDI FFLSTHQLGS YPGTGKIHQV GQGNGEGTTL 300 NLPLPGGSGD YAMRCAFDEV IAPAAQSFKP DIILVSAGYD AHALDPLAGL QFTTGTFYML 360 AARIREVAAE LCGGRCVFFL EGGYNLQSLS SSVADTFRAF LGEPSLAAQF DDPAMLYEEP 420 TRKIREAIDK ARHLHSL 437Protein Fasta Sequence
>LPERR12G04530.1|Class-I|Leersia perrieri MEQLWVPSLPILGGKILPMLRHYCAFGSHHPLTWRSLQNTGRCCIAYCLPRDNEASILDTNSVRKDLALPDNLLRDARILYCTSPAMGHNKDAHPETNKRVPAIVDALEKLELTPKHCGSQILEIQDFEPASLDDVARVHSRSYITGLEKAMSRASDEGLIFIEGTGPTYATQTTFQECLLSAGAGITLVDSVVAASKLGPNPPLGFALVRPPGHHAVPEGPMGFCVFGNVAVAARYAQQQHGLKRVMIIDFDVHHGNGTCDAFYDDPDIFFLSTHQLGSYPGTGKIHQVGQGNGEGTTLNLPLPGGSGDYAMRCAFDEVIAPAAQSFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLAARIREVAAELCGGRCVFFLEGGYNLQSLSSSVADTFRAFLGEPSLAAQFDDPAMLYEEPTRKIREAIDKARHLHSL
|
Nucleotide Sequence (Fasta) | ATTTTGCGCC TCTGAAAATA CCAGAAAGAA ATTGCAGAGA AGATAGCGAA AGCTTCGGGT 60 GAAATCCTCT GGTGGTTCAT GGACCAGGAT CCTCGTTGAA GAGATAATTT CCCTTGTTTT 120 TTCGATTGAA AAGACAGGGG AAAAGAAGGA AGCAAGAAGT CATAGAGAAG CGGGGATTCA 180 GTGAGAAAGG GGGCGAGAGA GATTCCTGGA GCTTTGCAGG AGGGGATGGA ACAGCTGTGG 240 GTACCATCCC TTCCGATTCT TGGAGGAAAG ATATTGCCTA TGCTCAGGCA TTACTGTGCC 300 TTTGGAAGTC ATCATCCCTT AACCTGGAGA AGCTTACAAA ATACTGGAAG GTGTTGCATT 360 GCATACTGCT TACCAAGGGA CAATGAAGCT TCTATTTTAG ACACAAATAG TGTTCGAAAA 420 GACTTAGCTT TGCCTGACAA TTTGCTTCGT GATGCTCGTA TTCTTTATTG TACATCCCCT 480 GCCATGGGTC ATAACAAGGA TGCGCATCCA GAAACTAACA AACGAGTTCC TGCAATAGTT 540 GATGCTCTCG AAAAACTGGA GCTTACTCCA AAGCATTGTG GTTCACAGAT TCTTGAAATT 600 CAAGATTTCG AACCTGCTTC CCTTGATGAT GTTGCACGAG TTCATTCAAG ATCATACATA 660 ACTGGACTTG AAAAGGCTAT GAGTAGGGCT TCAGACGAAG GTTTGATATT CATTGAAGGA 720 ACTGGACCTA CATACGCTAC ACAGACTACT TTCCAAGAAT GTCTCCTTTC AGCTGGTGCT 780 GGAATTACAT TGGTTGATTC AGTGGTTGCA GCATCAAAAT TGGGCCCAAA TCCACCACTT 840 GGCTTTGCTT TAGTAAGGCC GCCAGGACAT CATGCCGTTC CTGAAGGTCC TATGGGCTTC 900 TGTGTATTTG GGAACGTTGC AGTGGCAGCT CGGTATGCTC AGCAGCAACA TGGATTAAAG 960 CGAGTCATGA TAATAGACTT TGATGTTCAC CATGGTAATG GCACATGTGA CGCCTTCTAC 1020 GACGATCCGG ACATATTCTT TCTCTCAACT CATCAGCTTG GAAGCTATCC TGGCACGGGT 1080 AAGATCCACC AAGTTGGCCA GGGCAATGGC GAGGGCACGA CACTCAACCT GCCATTACCC 1140 GGTGGCTCAG GCGATTATGC AATGAGGTGT GCGTTTGATG AGGTCATCGC TCCAGCAGCG 1200 CAGAGTTTCA AGCCTGACAT CATCCTTGTT TCAGCCGGGT ACGACGCGCA CGCGCTGGAC 1260 CCGCTGGCAG GGCTGCAGTT CACGACGGGG ACGTTCTACA TGCTGGCGGC GAGAATACGG 1320 GAGGTGGCGG CGGAGCTGTG TGGCGGGCGG TGCGTCTTCT TCCTGGAGGG AGGGTACAAC 1380 CTGCAGTCGC TGTCCAGCTC CGTTGCCGAC ACATTTCGGG CGTTCCTCGG CGAGCCCAGC 1440 CTCGCCGCGC AGTTCGACGA CCCGGCGATG CTGTACGAGG AGCCCACAAG GAAGATCAGG 1500 GAGGCCATTG ACAAGGCCAG GCACCTCCAC TCGCTCTAGG CGCCAAAAGG ATGCTGCAGT 1560 ATTTGGCCTG AACTAAAACT GCGTGCTGGT AAAGATCATT CATGCCTTTT GCTAGCTAGC 1620 TTTCGCAGTT TCAGACTTTC AGTGTACATA TATAACGCGT TTGTATATGG TTGGAAGATG 1680 TAATTTACAA CTGTGTTTAG TTACTGTGAA ACAGGTATAT TCATTCACAA ACTTAATAGA 1740 TTAATCCATC TGACTAAAGC TCTGATATAT TTTGACGGTC ATTTTTGCTT GATATTGCCC 1800 TGGGGATCCG GATCGTCTGC AGTAGGGGAA AAAAGTCAGG AGGGCAGTAA AACAAGTCTT 1860 ATGCTACAGC AAGAACAGTA TTTTTGCAGT AATTTACTAT AGCAATATCG TGCAACAATA 1920 CTGAACAGTA TTTTGCAATA ATTTACTGTT CATTACGTGC TGTAGCAATC GATCTCAACC 1980 GTTCGATGTA GATCAAACGG CTGAAAATCT CCTAAAG
2018Nucleotide Fasta Sequence
>LPERR12G04530.1|Class-I|Leersia perrieri ATTTTGCGCCTCTGAAAATACCAGAAAGAAATTGCAGAGAAGATAGCGAAAGCTTCGGGTGAAATCCTCTGGTGGTTCATGGACCAGGATCCTCGTTGAAGAGATAATTTCCCTTGTTTTTTCGATTGAAAAGACAGGGGAAAAGAAGGAAGCAAGAAGTCATAGAGAAGCGGGGATTCAGTGAGAAAGGGGGCGAGAGAGATTCCTGGAGCTTTGCAGGAGGGGATGGAACAGCTGTGGGTACCATCCCTTCCGATTCTTGGAGGAAAGATATTGCCTATGCTCAGGCATTACTGTGCCTTTGGAAGTCATCATCCCTTAACCTGGAGAAGCTTACAAAATACTGGAAGGTGTTGCATTGCATACTGCTTACCAAGGGACAATGAAGCTTCTATTTTAGACACAAATAGTGTTCGAAAAGACTTAGCTTTGCCTGACAATTTGCTTCGTGATGCTCGTATTCTTTATTGTACATCCCCTGCCATGGGTCATAACAAGGATGCGCATCCAGAAACTAACAAACGAGTTCCTGCAATAGTTGATGCTCTCGAAAAACTGGAGCTTACTCCAAAGCATTGTGGTTCACAGATTCTTGAAATTCAAGATTTCGAACCTGCTTCCCTTGATGATGTTGCACGAGTTCATTCAAGATCATACATAACTGGACTTGAAAAGGCTATGAGTAGGGCTTCAGACGAAGGTTTGATATTCATTGAAGGAACTGGACCTACATACGCTACACAGACTACTTTCCAAGAATGTCTCCTTTCAGCTGGTGCTGGAATTACATTGGTTGATTCAGTGGTTGCAGCATCAAAATTGGGCCCAAATCCACCACTTGGCTTTGCTTTAGTAAGGCCGCCAGGACATCATGCCGTTCCTGAAGGTCCTATGGGCTTCTGTGTATTTGGGAACGTTGCAGTGGCAGCTCGGTATGCTCAGCAGCAACATGGATTAAAGCGAGTCATGATAATAGACTTTGATGTTCACCATGGTAATGGCACATGTGACGCCTTCTACGACGATCCGGACATATTCTTTCTCTCAACTCATCAGCTTGGAAGCTATCCTGGCACGGGTAAGATCCACCAAGTTGGCCAGGGCAATGGCGAGGGCACGACACTCAACCTGCCATTACCCGGTGGCTCAGGCGATTATGCAATGAGGTGTGCGTTTGATGAGGTCATCGCTCCAGCAGCGCAGAGTTTCAAGCCTGACATCATCCTTGTTTCAGCCGGGTACGACGCGCACGCGCTGGACCCGCTGGCAGGGCTGCAGTTCACGACGGGGACGTTCTACATGCTGGCGGCGAGAATACGGGAGGTGGCGGCGGAGCTGTGTGGCGGGCGGTGCGTCTTCTTCCTGGAGGGAGGGTACAACCTGCAGTCGCTGTCCAGCTCCGTTGCCGACACATTTCGGGCGTTCCTCGGCGAGCCCAGCCTCGCCGCGCAGTTCGACGACCCGGCGATGCTGTACGAGGAGCCCACAAGGAAGATCAGGGAGGCCATTGACAAGGCCAGGCACCTCCACTCGCTCTAGGCGCCAAAAGGATGCTGCAGTATTTGGCCTGAACTAAAACTGCGTGCTGGTAAAGATCATTCATGCCTTTTGCTAGCTAGCTTTCGCAGTTTCAGACTTTCAGTGTACATATATAACGCGTTTGTATATGGTTGGAAGATGTAATTTACAACTGTGTTTAGTTACTGTGAAACAGGTATATTCATTCACAAACTTAATAGATTAATCCATCTGACTAAAGCTCTGATATATTTTGACGGTCATTTTTGCTTGATATTGCCCTGGGGATCCGGATCGTCTGCAGTAGGGGAAAAAAGTCAGGAGGGCAGTAAAACAAGTCTTATGCTACAGCAAGAACAGTATTTTTGCAGTAATTTACTATAGCAATATCGTGCAACAATACTGAACAGTATTTTGCAATAATTTACTGTTCATTACGTGCTGTAGCAATCGATCTCAACCGTTCGATGTAGATCAAACGGCTGAAAATCTCCTAAAG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |