WERAM Information


Tag Content
WERAM ID WERAM-Lep-0114
Ensembl Protein ID LPERR12G04530.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
LPERR12G04530 LPERR12G04530.1 LPERR12G04530.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 3.30e-91 306.8 86 402
HDAC Class-I 5.10e-27 96.2 92 366
Organism Leersia perrieri
Domain Profile
  HDAC Class-II

      class-2.txt  15 aleenkekhpEkpeRiqailsrlqeaglle.....kleelka.rkatkeelqlvHseehvelletaeklekeelesltvdsdsiylesksikaa 102
a+ +nk+ hpE+ +R+ ai+++l++ +l++ +++e++ + a++++++ vHs+++++ le+a++ + e + + ++ +y+++++++
LPERR12G04530.1 86 AMGHNKDAHPETNKRVPAIVDALEKLELTPkhcgsQILEIQDfEPASLDDVARVHSRSYITGLEKAMSRASDEGLIFIEGTGPTYATQTTFQEC 179
66789999*********************9555555889988799*********************955555555599**************** PP
class-2.txt 103 rlavGavlelvdkvlkgel..kn...gfavvRPPGHHaeestamGFClfnnvavaakllqqklkvkkilivDwDvHhGnGtqeifykdpkvlyl 191
l++Ga ++lvd+v++++ n gfa+vRPPGHHa ++ +mGFC+f nvavaa+++qq++ +k+++i+D+DvHhGnGt ++fy+dp++++l
LPERR12G04530.1 180 LLSAGAGITLVDSVVAASKlgPNpplGFALVRPPGHHAVPEGPMGFCVFGNVAVAARYAQQQHGLKRVMIIDFDVHHGNGTCDAFYDDPDIFFL 273
**************999864433788******************************************************************** PP
class-2.txt 192 SlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgglsvtakcyatlt 285
S+H + gs +p g+g++++vg+g+geg+++N++++gg+ gd ++ af+ev+ p+a++FkPd++lvsaG+Da++ dpl+gl++t+ ++ +l+
LPERR12G04530.1 274 STH--QLGS-YP--GTGKIHQVGQGNGEGTTLNLPLPGGS-GDYAMRCAFDEVIAPAAQSFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLA 361
***..99**.78..8***********************99.****************************************************9 PP
class-2.txt 286 kqllkl....aggrvvlvlEGGynlkaiaeaveavvkaLlg 322
++++ +ggr+v++lEGGynl++++++v+ +++a lg
LPERR12G04530.1 362 ARIREVaaelCGGRCVFFLEGGYNLQSLSSSVADTFRAFLG 402
9988776666*************************999875 PP

  HDAC Class-I

      class-1.txt  18 qkhpmkpkrlsltheLv......lnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvf..dglfeycq 103
+ hp +kr+ + + + ++ s+ lei + as ++++++hs yi+ l+k + ++e ++ P + + f+ c
LPERR12G04530.1 92 DAHPETNKRVPAIVDALekleltPKHCGSQILEIQDFEPASLDDVARVHSRSYITGLEKAMSRASDEGL-----IFIEGTGPTYatQTTFQECL 180
45555555554443333121121344456889999999*******************998776655443.....347777776511678888** PP
class-1.txt 104 litGasleaakkLnkkeadiainwaGGl.......hhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtv 188
l++Ga ++ ++ + ++++ n G+ hha + Gfc ++ +a +++h krv+ id+d+hhG+g +afy ++ +
LPERR12G04530.1 181 LSAGAGITLVDSVVAA-SKLGPNPPLGFalvrppgHHAVPEGPMGFCVFGNVAVAARYAQQQHglKRVMIIDFDVHHGNGTCDAFYDDPDIFFL 273
*****98877776654.344444333322222333***************9999998777755449**************************** PP
class-1.txt 189 sfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvk 282
s h+ g +PgtG++++vg+++g ++n+Pl g D ++ f +vi + + f+P+++++ G D+ a D+l+ ++++ ++ ++
LPERR12G04530.1 274 STHQLGS--YPGTGKIHQVGQGNGEGTTLNLPLPGGSGDYAMRCAFDEVIAPAAQSFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLAARIR 365
*******..9*******************************************************************99999876655555454 PP
class-1.txt 283 s 283
+
LPERR12G04530.1 366 E 366
4 PP

Protein Sequence
(Fasta)
MEQLWVPSLP ILGGKILPML RHYCAFGSHH PLTWRSLQNT GRCCIAYCLP RDNEASILDT 60
NSVRKDLALP DNLLRDARIL YCTSPAMGHN KDAHPETNKR VPAIVDALEK LELTPKHCGS 120
QILEIQDFEP ASLDDVARVH SRSYITGLEK AMSRASDEGL IFIEGTGPTY ATQTTFQECL 180
LSAGAGITLV DSVVAASKLG PNPPLGFALV RPPGHHAVPE GPMGFCVFGN VAVAARYAQQ 240
QHGLKRVMII DFDVHHGNGT CDAFYDDPDI FFLSTHQLGS YPGTGKIHQV GQGNGEGTTL 300
NLPLPGGSGD YAMRCAFDEV IAPAAQSFKP DIILVSAGYD AHALDPLAGL QFTTGTFYML 360
AARIREVAAE LCGGRCVFFL EGGYNLQSLS SSVADTFRAF LGEPSLAAQF DDPAMLYEEP 420
TRKIREAIDK ARHLHSL 437
Nucleotide Sequence
(Fasta)
ATTTTGCGCC TCTGAAAATA CCAGAAAGAA ATTGCAGAGA AGATAGCGAA AGCTTCGGGT 60
GAAATCCTCT GGTGGTTCAT GGACCAGGAT CCTCGTTGAA GAGATAATTT CCCTTGTTTT 120
TTCGATTGAA AAGACAGGGG AAAAGAAGGA AGCAAGAAGT CATAGAGAAG CGGGGATTCA 180
GTGAGAAAGG GGGCGAGAGA GATTCCTGGA GCTTTGCAGG AGGGGATGGA ACAGCTGTGG 240
GTACCATCCC TTCCGATTCT TGGAGGAAAG ATATTGCCTA TGCTCAGGCA TTACTGTGCC 300
TTTGGAAGTC ATCATCCCTT AACCTGGAGA AGCTTACAAA ATACTGGAAG GTGTTGCATT 360
GCATACTGCT TACCAAGGGA CAATGAAGCT TCTATTTTAG ACACAAATAG TGTTCGAAAA 420
GACTTAGCTT TGCCTGACAA TTTGCTTCGT GATGCTCGTA TTCTTTATTG TACATCCCCT 480
GCCATGGGTC ATAACAAGGA TGCGCATCCA GAAACTAACA AACGAGTTCC TGCAATAGTT 540
GATGCTCTCG AAAAACTGGA GCTTACTCCA AAGCATTGTG GTTCACAGAT TCTTGAAATT 600
CAAGATTTCG AACCTGCTTC CCTTGATGAT GTTGCACGAG TTCATTCAAG ATCATACATA 660
ACTGGACTTG AAAAGGCTAT GAGTAGGGCT TCAGACGAAG GTTTGATATT CATTGAAGGA 720
ACTGGACCTA CATACGCTAC ACAGACTACT TTCCAAGAAT GTCTCCTTTC AGCTGGTGCT 780
GGAATTACAT TGGTTGATTC AGTGGTTGCA GCATCAAAAT TGGGCCCAAA TCCACCACTT 840
GGCTTTGCTT TAGTAAGGCC GCCAGGACAT CATGCCGTTC CTGAAGGTCC TATGGGCTTC 900
TGTGTATTTG GGAACGTTGC AGTGGCAGCT CGGTATGCTC AGCAGCAACA TGGATTAAAG 960
CGAGTCATGA TAATAGACTT TGATGTTCAC CATGGTAATG GCACATGTGA CGCCTTCTAC 1020
GACGATCCGG ACATATTCTT TCTCTCAACT CATCAGCTTG GAAGCTATCC TGGCACGGGT 1080
AAGATCCACC AAGTTGGCCA GGGCAATGGC GAGGGCACGA CACTCAACCT GCCATTACCC 1140
GGTGGCTCAG GCGATTATGC AATGAGGTGT GCGTTTGATG AGGTCATCGC TCCAGCAGCG 1200
CAGAGTTTCA AGCCTGACAT CATCCTTGTT TCAGCCGGGT ACGACGCGCA CGCGCTGGAC 1260
CCGCTGGCAG GGCTGCAGTT CACGACGGGG ACGTTCTACA TGCTGGCGGC GAGAATACGG 1320
GAGGTGGCGG CGGAGCTGTG TGGCGGGCGG TGCGTCTTCT TCCTGGAGGG AGGGTACAAC 1380
CTGCAGTCGC TGTCCAGCTC CGTTGCCGAC ACATTTCGGG CGTTCCTCGG CGAGCCCAGC 1440
CTCGCCGCGC AGTTCGACGA CCCGGCGATG CTGTACGAGG AGCCCACAAG GAAGATCAGG 1500
GAGGCCATTG ACAAGGCCAG GCACCTCCAC TCGCTCTAGG CGCCAAAAGG ATGCTGCAGT 1560
ATTTGGCCTG AACTAAAACT GCGTGCTGGT AAAGATCATT CATGCCTTTT GCTAGCTAGC 1620
TTTCGCAGTT TCAGACTTTC AGTGTACATA TATAACGCGT TTGTATATGG TTGGAAGATG 1680
TAATTTACAA CTGTGTTTAG TTACTGTGAA ACAGGTATAT TCATTCACAA ACTTAATAGA 1740
TTAATCCATC TGACTAAAGC TCTGATATAT TTTGACGGTC ATTTTTGCTT GATATTGCCC 1800
TGGGGATCCG GATCGTCTGC AGTAGGGGAA AAAAGTCAGG AGGGCAGTAA AACAAGTCTT 1860
ATGCTACAGC AAGAACAGTA TTTTTGCAGT AATTTACTAT AGCAATATCG TGCAACAATA 1920
CTGAACAGTA TTTTGCAATA ATTTACTGTT CATTACGTGC TGTAGCAATC GATCTCAACC 1980
GTTCGATGTA GATCAAACGG CTGAAAATCT CCTAAAG 2018
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orb-0120 OBART12G04910.1 Oryza barthii 93 0.0 850
WERAM-Org-0113 ORGLA12G0047100.1 Oryza glaberrima 93 0.0 849
WERAM-Ori-0128 BGIOSGA037104-PA Oryza indica 93 0.0 847
WERAM-Orni-0103 ONIVA09G16260.1 Oryza nivara 93 0.0 846
WERAM-Orp-0110 OPUNC12G04860.1 Oryza punctata 93 0.0 845
WERAM-Ors-0108 OS12T0182700-01 Oryza sativa 93 0.0 845
WERAM-Orgl-0115 OGLUM12G05720.1 Oryza glumaepatula 89 0.0 836
WERAM-Orl-0008 KN538685.1_FGP052 Oryza longistaminata 89 0.0 833
WERAM-Orr-0120 ORUFI12G05690.1 Oryza rufipogon 89 0.0 832
WERAM-Orm-0105 OMERI12G03370.1 Oryza meridionalis 85 0.0 827
WERAM-Orbr-0123 OB12G14780.1 Oryza brachyantha 88 0.0 803
WERAM-Brd-0117 BRADI4G40960.1 Brachypodium distachyon 83 0.0 764
WERAM-Tra-0186 Traes_5AS_78CA97493.2 Triticum aestivum 82 0.0 745
WERAM-Sei-0036 Si010171m Setaria italica 81 0.0 719
WERAM-Zem-0142 GRMZM2G456473_P01 Zea mays 81 0.0 716
WERAM-Sob-0054 Sb03g038950.1 Sorghum bicolor 82 0.0 711
WERAM-Tru-0036 TRIUR3_18154-P1 Triticum urartu 76 0.0 674
WERAM-Mua-0145 GSMUA_AchrUn_randomP00520_001 Musa acuminata 68 5e-180 627
WERAM-Viv-0021 VIT_04s0044g01510.t01 Vitis vinifera 75 1e-169 593
WERAM-Pot-0060 POPTR_0005s06520.1 Populus trichocarpa 73 5e-164 574
WERAM-Arl-0142 scaffold_700814.1 Arabidopsis lyrata 69 1e-160 563
WERAM-Glm-0050 GLYMA05G32600.1 Glycine max 64 4e-159 558
WERAM-Art-0110 AT4G33470.1 Arabidopsis thaliana 69 8e-159 557
WERAM-Bro-0004 Bo1g008110.1 Brassica oleracea 66 4e-158 555
WERAM-Brr-0061 Bra011444.1-P Brassica rapa 66 7e-158 554
WERAM-Prp-0071 EMJ12704 Prunus persica 72 3e-157 551
WERAM-Met-0183 AET04758 Medicago truncatula 63 5e-157 551
WERAM-Php-0127 PP1S85_154V6.1 Physcomitrella patens 63 1e-151 533
WERAM-Amt-0065 ERN18144 Amborella trichopoda 67 4e-148 521
WERAM-Sem-0047 EFJ16002 Selaginella moellendorffii 60 2e-126 449
WERAM-Sol-0006 Solyc01g009110.2.1 Solanum lycopersicum 75 8e-120 427
WERAM-Thc-0007 EOX92582 Theobroma cacao 76 8e-114 407
WERAM-Osl-0036 ABP01312 Ostreococcus lucimarinus 49 3e-94 343
WERAM-Chr-0006 EDP01653 Chlamydomonas reinhardtii 54 9e-54 208
WERAM-Spr-0021 CBQ72644 Sporisorium reilianum 37 4e-48 189
WERAM-Myl-0003 ENSMLUP00000000417.2 Myotis lucifugus 41 1e-47 188
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 36 1e-47 187
WERAM-Caa-0034 KGT64501 Candida albicans 33 3e-47 186
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 35 4e-47 186
WERAM-Cag-0018 CAG60803 Candida glabrata 34 4e-47 186
WERAM-Coi-0028 EAS30926 Coccidioides immitis 35 5e-47 186
WERAM-Caf-0004 ENSCAFP00000000979.4 Canis familiaris 38 9e-47 185
WERAM-Aim-0036 ENSAMEP00000002564.1 Ailuropoda melanoleuca 38 1e-46 184
WERAM-Cae-0060 F41H10.6b Caenorhabditis elegans 35 3e-46 183
WERAM-Mup-0023 ENSMPUP00000002307.1 Mustela putorius furo 37 4e-46 183
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 35 4e-46 182
WERAM-Ict-0132 ENSSTOP00000013675.2 Ictidomys tridecemlineatus 36 5e-46 182
WERAM-Eqc-0086 ENSECAP00000010704.1 Equus caballus 37 7e-46 182
WERAM-Sac-0037 YNL021W Saccharomyces cerevisiae 32 9e-46 181
WERAM-Tut-0141 ENSTTRP00000011664.1 Tursiops truncatus 38 9e-46 181
WERAM-Mum-0213 ENSMUSP00000080832.5 Mus musculus 38 2e-45 181
WERAM-Trv-0041 EHK18675 Trichoderma virens 33 2e-45 181
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 34 3e-45 180
WERAM-Fec-0119 ENSFCAP00000011049.3 Felis catus 37 3e-45 180
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 35 3e-45 179
WERAM-Xim-0154 ENSXMAP00000012744.1 Xiphophorus maculatus 38 5e-45 179
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 32 7e-45 179
WERAM-Bot-0106 ENSBTAP00000014602.4 Bos taurus 38 8e-45 178
WERAM-Cap-0164 ENSCPOP00000013386.2 Cavia porcellus 36 1e-44 178
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 35 1e-44 178
WERAM-Paa-0009 ENSPANP00000013655.1 Papio anubis 38 1e-44 178
WERAM-Otg-0149 ENSOGAP00000012689.2 Otolemur garnettii 36 1e-44 177
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 34 1e-44 177
WERAM-Pat-0122 ENSPTRP00000025053.4 Pan troglodytes 36 2e-44 177
WERAM-Ran-0209 ENSRNOP00000009295.5 Rattus norvegicus 37 2e-44 177
WERAM-Sus-0012 ENSSSCP00000001039.2 Sus scrofa 38 2e-44 177
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 36 2e-44 177
WERAM-Gog-0159 ENSGGOP00000014095.2 Gorilla gorilla 35 2e-44 177
WERAM-Chs-0051 ENSCSAP00000001305.1 Chlorocebus sabaeus 35 3e-44 177
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 35 3e-44 176
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 37 4e-44 176
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 34 4e-44 176
WERAM-Mel-0037 EGG03660 Melampsora laricipopulina 33 5e-44 176
WERAM-Ere-0078 ENSEEUP00000006690.1 Erinaceus europaeus 39 5e-44 176
WERAM-Hos-0058 ENSP00000216271.5 Homo sapiens 35 6e-44 176
WERAM-Nol-0005 ENSNLEP00000000692.2 Nomascus leucogenys 36 8e-44 175
WERAM-Pof-0123 ENSPFOP00000010612.2 Poecilia formosa 37 9e-44 175
WERAM-Pug-0031 EFP89333 Puccinia graminis 33 9e-44 175
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 34 1e-43 174
WERAM-Gag-0014 GGTG_04308T0 Gaeumannomyces graminis 30 1e-43 174
WERAM-Yal-0023 CAG79971 Yarrowia lipolytica 35 1e-43 174
WERAM-Kop-0012 CAY68916 Komagataella pastoris 32 2e-43 174
WERAM-Gaa-0030 ENSGACP00000005071.1 Gasterosteus aculeatus 36 2e-43 174
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 36 2e-43 174
WERAM-Ten-0061 ENSTNIP00000000291.1 Tetraodon nigroviridis 42 3e-43 173
WERAM-Ect-0100 ENSETEP00000011415.1 Echinops telfairi 39 4e-43 173
WERAM-Aet-0088 EMT31322 Aegilops tauschii 39 4e-43 172
WERAM-Trr-0039 EGR46026 Trichoderma reesei 33 7e-43 172
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 34 7e-43 172
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 34 7e-43 172
WERAM-Aso-0015 CADAORAP00001816 Aspergillus oryzae 35 8e-43 172
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 36 8e-43 172
WERAM-Chg-0033 EAQ86725 Chaetomium globosum 32 8e-43 172
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 31 8e-43 172
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 31 1e-42 171
WERAM-Map-0033 MAPG_10880T0 Magnaporthe poae 30 1e-42 171
WERAM-Usm-0012 UM02102P0 Ustilago maydis 35 1e-42 171
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 34 1e-42 171
WERAM-Gam-0051 ENSGMOP00000005244.1 Gadus morhua 34 1e-42 171
WERAM-Asg-0010 AAS51704 Ashbya gossypii 34 2e-42 171
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 35 3e-42 170
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 34 3e-42 170
WERAM-Pes-0141 ENSPSIP00000016742.1 Pelodiscus sinensis 36 3e-42 170
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 34 3e-42 169
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 38 4e-42 169
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 36 5e-42 169
WERAM-Mae-0029 ENSMEUP00000002095.1 Macropus eugenii 35 5e-42 169
WERAM-Nec-0012 EFNCRP00000001681 Neurospora crassa 32 6e-42 169
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 33 1e-41 167
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 33 1e-41 167
WERAM-Leo-0108 ENSLOCP00000014009.1 Lepisosteus oculatus 34 2e-41 167
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 36 2e-41 167
WERAM-Phn-0010 SNOT_01279 Phaeosphaeria nodorum 37 2e-41 167
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 36 2e-41 167
WERAM-Sah-0095 ENSSHAP00000011018.1 Sarcophilus harrisii 34 3e-41 167
WERAM-Ved-0005 EGY17208 Verticillium dahliae 30 4e-41 166
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 34 4e-41 166
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 36 5e-41 166
WERAM-Caj-0009 ENSCJAP00000001947.2 Callithrix jacchus 34 5e-41 166
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 33 6e-41 166
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 34 6e-41 166
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 34 6e-41 166
WERAM-Fuo-0035 FOXG_13914P0 Fusarium oxysporum 32 7e-41 165
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 34 7e-41 165
Created Date 25-Jun-2016