WERAM Information

Tag Content
WERAM ID WERAM-Xim-0229
Ensembl Protein ID ENSXMAP00000019038.1
Gene Name hdac1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXMAG00000018986.1 ENSXMAT00000019066.1 ENSXMAP00000019038.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.50e-175 583.2 10 321
Organism Xiphophorus maculatus
Domain Profile
  HDAC Class-I
           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89 
                           kkv+y+yd dvg+y+ygq+hpmkp+r+++th+L+lnygl++k+ei++p+kas ee++k+hs++yi+fl++++p+n++e+sk++++fnvg
  ENSXMAP00000019038.1  10 KKVCYYYDGDVGNYYYGQGHPMKPHRIRMTHNLLLNYGLYRKMEIYRPHKASGEEMTKYHSDDYIRFLRSIRPDNMSEYSKQMQRFNVG 98 
                           589************************************************************************************** PP
           class-1.txt  90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveea 178
                           edcPvfdglfe+cql++G+s+++a kLnk+++diainwaGGlhhakkseasGfcyvnDivlailellk+h+rvlyidid+hhGDgveea
  ENSXMAP00000019038.1  99 EDCPVFDGLFEFCQLSAGGSVAGAVKLNKQQTDIAINWAGGLHHAKKSEASGFCYVNDIVLAILELLKYHQRVLYIDIDIHHGDGVEEA 187
                           ***************************************************************************************** PP
           class-1.txt 179 fyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgef 267
                           fyttdrvmtvsfhkyge +fPgtGdl+d+ga+kgkyyavn+Pl+dgidDesye+ifk+++ kv+e+++P+avvlqcGaDsl+gDrlg+f
  ENSXMAP00000019038.1 188 FYTTDRVMTVSFHKYGE-YFPGTGDLRDIGAGKGKYYAVNYPLRDGIDDESYEAIFKPIMAKVMEMYQPSAVVLQCGADSLSGDRLGCF 275
                           *****************.*********************************************************************** PP
           class-1.txt 268 nlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           nl+ikgha+cv+++ksfnlpll+lGGGGYt+rnvaRcwt+etav+l
  ENSXMAP00000019038.1 276 NLTIKGHAKCVEYIKSFNLPLLMLGGGGYTIRNVARCWTFETAVAL 321
                           *******************************************987 PP
Protein Sequence
(Fasta)		MAFTSQGTKK KVCYYYDGDV GNYYYGQGHP MKPHRIRMTH NLLLNYGLYR KMEIYRPHKA 60
SGEEMTKYHS DDYIRFLRSI RPDNMSEYSK QMQRFNVGED CPVFDGLFEF CQLSAGGSVA 120
GAVKLNKQQT DIAINWAGGL HHAKKSEASG FCYVNDIVLA ILELLKYHQR VLYIDIDIHH 180
GDGVEEAFYT TDRVMTVSFH KYGEYFPGTG DLRDIGAGKG KYYAVNYPLR DGIDDESYEA 240
IFKPIMAKVM EMYQPSAVVL QCGADSLSGD RLGCFNLTIK GHAKCVEYIK SFNLPLLMLG 300
GGGYTIRNVA RCWTFETAVA LDSSIPNELP YNDYFEYFGP DFKLHISPSN MTNQNTNDYL 360
EKIKQRLFEN LRMLPHAPGV QMQAIPEDAV QEDSGDEEDD PNKRISIRAH DKRIACEEEF 420
SDSEDEGEGG RRNAASYKKA KRTKTEGEKE TEEKKKSTEE TKEVKEEEKV PEEEKMDTSK 480
PNEEPKTP 488
Nucleotide Sequence
(Fasta)		ATCCCATTGA CCAAACGTGT CGCTGTTGTC TCCTCTCCTG CACTGTGGGT AAAATCATCC 60
AAAAAATAAG ACTAAAATGG CATTTACCTC CCAAGGCACA AAGAAAAAAG TTTGCTACTA 120
CTATGATGGT GATGTTGGAA ATTACTACTA TGGTCAGGGC CATCCCATGA AGCCTCACCG 180
AATCCGCATG ACCCACAACC TGCTGCTCAA CTATGGGCTC TACAGAAAGA TGGAGATCTA 240
TCGTCCACAC AAAGCCAGTG GAGAAGAGAT GACCAAGTAT CACAGTGATG ATTACATCAG 300
GTTCTTGCGC TCTATCAGGC CAGACAACAT GTCAGAATAC AGCAAACAGA TGCAGAGATT 360
TAATGTGGGT GAGGACTGTC CGGTCTTCGA TGGTTTGTTC GAGTTCTGCC AGCTCTCAGC 420
AGGAGGCTCC GTCGCCGGTG CCGTAAAGTT GAACAAACAG CAGACAGACA TCGCGATCAA 480
CTGGGCCGGA GGGCTTCATC ACGCCAAAAA GTCTGAAGCC TCTGGGTTTT GCTACGTCAA 540
CGACATCGTA CTGGCAATCC TGGAGTTACT GAAATACCAT CAGAGAGTTC TCTATATAGA 600
TATTGACATC CACCATGGAG ACGGTGTGGA GGAGGCTTTC TACACCACAG ATCGTGTTAT 660
GACTGTGTCC TTCCACAAGT ATGGAGAGTA CTTCCCAGGC ACCGGTGACC TGAGGGATAT 720
TGGTGCTGGA AAGGGTAAAT ATTATGCTGT AAATTATCCA CTGAGGGATG GGATCGATGA 780
TGAGTCCTAT GAAGCCATTT TCAAACCTAT CATGGCGAAG GTGATGGAGA TGTACCAGCC 840
CAGTGCTGTG GTCCTCCAGT GTGGAGCCGA CTCTCTGTCA GGGGACAGAC TGGGCTGCTT 900
CAACCTCACC ATTAAAGGCC ATGCCAAGTG TGTGGAGTAC ATTAAGAGCT TCAACCTGCC 960
GCTGCTGATG CTGGGAGGAG GCGGCTATAC GATCCGGAAC GTGGCCCGTT GCTGGACATT 1020
TGAGACTGCT GTGGCCCTAG ATAGCTCCAT CCCCAATGAG CTTCCATACA ATGACTACTT 1080
TGAGTACTTT GGACCAGACT TCAAGTTGCA CATCAGCCCC TCCAATATGA CCAATCAGAA 1140
CACAAACGAC TACCTGGAGA AGATCAAGCA GCGCTTGTTT GAGAACCTGC GCATGTTGCC 1200
TCACGCCCCC GGAGTCCAGA TGCAAGCCAT CCCAGAGGAC GCCGTGCAGG AGGACAGTGG 1260
CGACGAAGAG GACGATCCAA ACAAACGCAT ATCTATCCGC GCTCACGACA AAAGGATAGC 1320
GTGCGAGGAA GAGTTCTCGG ACTCGGAGGA CGAAGGCGAA GGCGGTCGCA GGAATGCAGC 1380
CAGCTACAAG AAAGCCAAAA GGACCAAGAC CGAAGGAGAG AAGGAGACAG AGGAGAAGAA 1440
GAAAAGTACA GAGGAAACAA AAGAAGTAAA AGAAGAAGAG AAGGTACCAG AGGAGGAAAA 1500
AATGGACACG TCAAAGCCAA ATGAGGAACC CAAGACACCT TGAGGTCCTG AACTTCCTGT 1560
GACAACAGTA CATCAGATCA GAGCTGATCC TAAAGTTTTT TTTTCTAAAT GATTGTTGCA 1620
GTGAAAGCTG GTAAAGAACT GTATATTTTA AGGCAGTGGA GATTAAATGG TTTCCATTTG 1680
TTCTTAATCT TTTCAACTTT TCCGTGTTTG GACAGAAAAC GTATTTTTCT GTATTTTTTT 1740
GTATGAATTT CTCTTATTTA CTATATTTGC TTTTCCAGTT GTGAAAATAT CTGTAAAAAT 1800
GGCTTAGCAT GTGCCTATTT TATATACTTG GATGTAATTT AACTAATTTT GGCAATTGTC 1860
TTTGTCATTT GATCCCCTTG TGTTATGTGC CTTTGGAGTT GTAGCAGAAT AATGTAGAAA 1920
AATGTGTCCC TTTTCTAGAA AACATGCAAC TCGTCCACCA AAATTTACAA GATGCATATT 1980
TCTATACATA TTTTACAGTT CTGCTTAAAT TAGCTTGTGC TTTTAAGTTG CACAATAACT 2040
TTAGGGATTT TTCTGAAACT AAATAGATCA CATTTTGAAC ACATTTCTTT AAACAAACTT 2100
GTCTGTTGAC GACTAAGTTC ACTGAAAAGG AAAGCCAGAT GTCTCGATTG ATTTGTGTAT 2160
ATATTCGTAT TCTGAAAACA GGTGAGTTCT TTAAACATTT TGATTGAACA AAACCTGTCA 2220
GAGGTTTCAA CTGTATTAAA ATCTTTTTTT AAAGAATAGA AAATGCGAGT TTTCTTTTTA 2280
CAATGAAACG GACATTTAAA CTGAAGGTAC ATGAGGCAGA TTTTAAAAAG GTACAAAAAT 2340
TATAAAAACA TTTTTAAAAG CATTCCATCA AATTATATGC CACTAATGGG CATAAATAGT 2400
AAAATGCAAC TGCTTTAACT TAAGTCCAGA TATATCAAAA TATCTGAATT GTAACAGATT 2460
CTCTCTGTTC AGTTTTTCAT CCTATTCAGT TGGATGAAAA ATGTTTTTTT CTGGTTTAGA 2520
CCCAGTCACT CAGCGTCTCT GTGCCGTGCA GCAGTTCATC CTGCTCTGCA GGTTGCTCTT 2580
CGGCTGCTTC CTCTAGAAAC GGCGGTGGAG TATCAGCCCT TTCCTGGACT TTAACCTGAA 2640
AGTGTAAGAA AAAAACAAGT TAAATTTGGA TGAATCAATG ATCTGATTCC ATAAT 2696
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 100 0.0 833
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 97 0.0 805
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 93 0.0 802
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 95 0.0 789
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 92 0.0 788
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 93 0.0 786
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 97 0.0 782
WERAM-Ten-0200 ENSTNIP00000020022.1 Tetraodon nigroviridis 91 0.0 778
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 91 0.0 773
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 90 0.0 769
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 95 0.0 769
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 91 0.0 768
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 91 0.0 767
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 91 0.0 766
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 91 0.0 766
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 91 0.0 766
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 91 0.0 766
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 91 0.0 766
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 91 0.0 766
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 91 0.0 765
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 91 0.0 765
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 91 0.0 765
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 91 0.0 765
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 91 0.0 764
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 91 0.0 763
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 90 0.0 762
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 90 0.0 761
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 91 0.0 760
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 90 0.0 760
WERAM-Xet-0050 ENSXETP00000015978.3 Xenopus tropicalis 91 0.0 759
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 91 0.0 759
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 91 0.0 759
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 90 0.0 759
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 91 0.0 759
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 91 0.0 759
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 91 0.0 758
WERAM-Myl-0035 ENSMLUP00000002835.2 Myotis lucifugus 91 0.0 758
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 90 0.0 758
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 91 0.0 758
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 91 0.0 757
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 91 0.0 757
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 91 0.0 757
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 91 0.0 756
WERAM-Aim-0151 ENSAMEP00000013919.1 Ailuropoda melanoleuca 91 0.0 754
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 90 0.0 753
WERAM-Fec-0127 ENSFCAP00000011581.3 Felis catus 91 0.0 751
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 92 0.0 749
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 92 0.0 749
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 92 0.0 745
WERAM-Pes-0022 ENSPSIP00000004737.1 Pelodiscus sinensis 92 0.0 744
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 92 0.0 743
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 90 0.0 729
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 86 0.0 712
WERAM-Mam-0083 ENSMMUP00000013015.2 Macaca mulatta 91 0.0 701
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 82 0.0 699
WERAM-Dio-0132 ENSDORP00000012520.1 Dipodomys ordii 85 0.0 687
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 84 0.0 685
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 82 0.0 659
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 93 0.0 651
WERAM-Mim-0092 ENSMICP00000008598.1 Microcebus murinus 83 2e-180 629
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 78 3e-176 615
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 85 4e-174 608
WERAM-Soa-0003 ENSSARP00000000316.1 Sorex araneus 80 1e-169 593
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 66 3e-167 585
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 68 1e-166 583
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 65 2e-166 583
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 65 4e-166 581
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 64 2e-165 579
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 64 3e-165 579
WERAM-Tra-0318 Traes_7DL_578CF3F0D.2 Triticum aestivum 68 6e-164 574
WERAM-Coi-0024 EAS33504 Coccidioides immitis 67 7e-164 574
WERAM-Brd-0020 BRADI1G37290.1 Brachypodium distachyon 67 2e-163 572
WERAM-Ved-0020 EGY15146 Verticillium dahliae 63 1e-161 566
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 66 3e-161 565
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 65 5e-161 565
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 63 9e-160 560
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 63 1e-159 560
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 69 9e-159 557
WERAM-Trv-0003 EHK19072 Trichoderma virens 64 1e-158 556
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 63 2e-158 556
WERAM-Tum-0029 CAZ85499 Tuber melanosporum 68 2e-158 556
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 66 2e-158 556
WERAM-Cag-0003 CAG57932 Candida glabrata 66 3e-158 555
WERAM-Ori-0039 BGIOSGA012324-PA Oryza indica 68 3e-158 555
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 66 3e-158 555
WERAM-Hov-0001 MLOC_10109.1 Hordeum vulgare 70 4e-158 555
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 68 6e-158 554
WERAM-Ors-0059 OS06T0583400-01 Oryza sativa 68 8e-158 554
WERAM-Orp-0064 OPUNC06G17670.1 Oryza punctata 68 9e-158 554
WERAM-Trr-0017 EGR48353 Trichoderma reesei 64 1e-157 553
WERAM-Orr-0068 ORUFI06G20660.1 Oryza rufipogon 68 1e-157 553
WERAM-Orgl-0064 OGLUM06G20570.1 Oryza glumaepatula 68 1e-157 553
WERAM-Chh-0102 ENSCHOP00000011659.1 Choloepus hoffmanni 73 3e-157 552
WERAM-Kop-0004 CAY67954 Komagataella pastoris 66 3e-157 552
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 67 4e-157 551
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 66 4e-157 551
WERAM-Glm-0156 GLYMA13G06010.3 Glycine max 67 5e-157 551
WERAM-Amt-0072 ERN20455 Amborella trichopoda 68 6e-157 551
WERAM-Caa-0018 KGT69072 Candida albicans 63 8e-157 550
WERAM-Asg-0034 AAS54885 Ashbya gossypii 64 1e-156 550
WERAM-Prp-0060 EMJ10303 Prunus persica 68 1e-156 550
WERAM-Met-0084 KEH36404 Medicago truncatula 69 1e-156 550
WERAM-Zyt-0024 Mycgr3P51809 Zymoseptoria tritici 62 2e-156 549
WERAM-Sob-0135 Sb10g022820.1 Sorghum bicolor 68 2e-156 549
WERAM-Orni-0065 ONIVA06G23170.1 Oryza nivara 68 3e-156 549
WERAM-Orm-0063 OMERI06G19730.1 Oryza meridionalis 68 3e-156 548
WERAM-Sei-0026 Si006243m Setaria italica 67 3e-156 548
WERAM-Zem-0056 GRMZM2G081474_P01 Zea mays 68 7e-156 547
WERAM-Thc-0026 EOX98961 Theobroma cacao 66 1e-155 547
WERAM-Orbr-0074 OB06G27130.1 Oryza brachyantha 69 2e-155 546
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 62 2e-155 546
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 59 5e-155 545
WERAM-Lep-0066 LPERR06G16070.1 Leersia perrieri 68 6e-155 544
WERAM-Pot-0112 POPTR_0009s17200.1 Populus trichocarpa 67 2e-154 543
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 66 3e-154 542
WERAM-Aet-0051 EMT16627 Aegilops tauschii 69 4e-154 542
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 64 9e-154 540
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 68 1e-153 540
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 67 2e-153 539
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 67 5e-153 538
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 67 9e-153 537
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 65 1e-152 537
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 65 1e-152 536
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 63 3e-152 535
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 67 8e-152 534
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 66 3e-151 532
Created Date 25-Jun-2016