WERAM Information

Tag Content
WERAM ID WERAM-Xim-0134
Ensembl Protein ID ENSXMAP00000011014.1
Gene Name msh6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXMAG00000010986.1 ENSXMAT00000011028.1 ENSXMAP00000011014.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 7.90e-18 64.4 95 155
Organism Xiphophorus maculatus
Domain Profile
  Me_Reader PWWP
              PWWP.txt   2 gdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           g LVwaKl+g pwWP++v+ +pl+++++ + + ++++ +V FF++ ++r wv+ k + +y++
  ENSXMAP00000011014.1  95 GALVWAKLEGHPWWPCMVVPQPLTGQQM-RGKGRDQRIHVHFFDEPPTRGWVSTKYIREYQG 155
                           78*************************9.9*****************************986 PP
Protein Sequence
(Fasta)		MAKQSSLFNF FTKSPPPVSK PKQSSSPAEA DLPSSVERSN SSPKEEARQS QSNQQQPSKN 60
TKVKQSKTAS GGFQKLFGDK AATTENSSKC SFVAGALVWA KLEGHPWWPC MVVPQPLTGQ 120
QMRGKGRDQR IHVHFFDEPP TRGWVSTKYI REYQGSDSSD VKPGGVFFSS KPVVRHAMEL 180
ADKSFFDSPE KRLKMPVCRD PSDEEEEDEE EEEMELDKST VSDEEVSDMD EKKSKEVKLP 240
KVSRCSSRSS AEQGGKPKRR RIIVASDSDG SDEEFKPEQA ASTSEEEEEE ATMSSEEEEK 300
ESSQQSEADS PMKPVKRKRP ADKSVSKKAK TPATPSAGPK RAPKTITADA KTRLSAFSAP 360
DSFESQANGS GPAGGATTWD HEKLEWLQDG RRKDGKRRRQ SEDDYDPTTL YVPEDFLNRN 420
TPGMRRWWQL KSGMFDTVIF YKVGKFYELY HMDAVIGVNE LGLTFMKGTW AHSGFPEIGF 480
ARFSDVLVQK GYKVARVEQT ETPEMMEARC KTMAKPTKFD RVVRREVCRI ITRGTQTYSV 540
LDGAPSESQS KFLLSLKEKA EDESSGRHRT YGVCFADTSV GYFHIGQFSD DRHCSRLRTL 600
IAHFPPAEVL FEKSNPSAET RKILKASLSS ALQEGLNAGT QFWDAQKTLK TLSEENYFEE 660
AAGDGFLPAL LRRMTSESDS LCLSPKEGYE LALSALGGCI FYLKKCLVDK ELLSMANFEE 720
YVPVDVELEK AAGPASFFSQ TRQRMVLDGV TLANLEIFQN GSGGTEGTLL ERLDSCSTPF 780
GKRLLKQWLC APLCNPASIR DRLDAMDDLI AAQAQAADVS ELLKKLPDLE RLLSKIHSIG 840
TPLKGQDHPD SRAVLYEEVT YSKRKIADFL SALEGFKTMQ EIISAFTPAT GDIRSTLLRQ 900
IVSLKTEEDG LFPDLSAELK RWETAFDHQK ARTTGVITPK TGFDPEFDQA LAGIKTCERD 960
LQDYLERQKK RLGCKNMAYW GTGRNRFQME VPNSVSERNI PEEYEVKSTK KGYKRYVTKE 1020
SERLFSELQG FEEKRDAALK DCMRRLFYNF DKNYRDWRTA VECMAVLDVL LALSRYSLGG 1080
DGPMARPQVV LPEDNDRSTP FINLTGSRHP CVTKTFFGDD FIPNDIFIGC PGNSEGDEVE 1140
GRASCVLVTG PNMGGKSTLM RQCGLVIILA QLGCYVPAES LCFTPVDRVF TRLGASDRIM 1200
AGESTFYVEL SETASILHHA TRHSLVLLDE LGRGTATYDG TAIASAVVKE LADKICCRTL 1260
FSTHYHSLVE DYANNATVRL GHMACMVENE CEDPSQETIT FLYKFITGAC PKSYGFNAAR 1320
LANLPEEVIQ SGHRKAREFE RSTISLRLFR KLCQFAEDAA PDNARFTSLV QLLNTL 1376
Nucleotide Sequence
(Fasta)		ATGGCGAAGC AAAGCTCTCT GTTCAACTTT TTCACCAAGT CTCCGCCGCC GGTTTCCAAA 60
CCGAAGCAGA GTTCCTCCCC GGCCGAGGCG GACCTGCCGA GCTCCGTGGA AAGGTCCAAC 120
TCGTCTCCCA AGGAGGAAGC CAGACAGTCG CAAAGCAACC AGCAGCAGCC GAGTAAGAAC 180
ACGAAAGTTA AACAGAGCAA GACTGCAAGC GGAGGATTCC AGAAACTGTT CGGAGACAAG 240
GCCGCGACGA CTGAAAACAG TTCCAAATGC TCATTTGTTG CTGGAGCCCT AGTGTGGGCC 300
AAACTGGAAG GACACCCCTG GTGGCCATGC ATGGTGGTAC CTCAACCTCT GACAGGCCAG 360
CAAATGAGGG GCAAAGGTCG GGATCAGCGC ATACATGTCC ATTTCTTTGA TGAACCTCCA 420
ACTAGAGGAT GGGTCAGCAC CAAATACATT AGAGAGTACC AAGGGTCTGA CAGCAGTGAC 480
GTTAAACCGG GGGGTGTGTT CTTCAGCAGC AAACCTGTGG TCCGCCATGC GATGGAGCTC 540
GCCGATAAAT CCTTTTTTGA TAGTCCTGAA AAACGCTTAA AAATGCCGGT GTGCAGGGAT 600
CCATCTGATG AGGAAGAGGA GGATGAAGAA GAAGAAGAAA TGGAGCTTGA CAAGTCAACA 660
GTGAGTGATG AAGAGGTCAG TGACATGGAC GAAAAGAAAA GCAAAGAAGT GAAGTTGCCC 720
AAAGTCAGTC GATGTTCTTC GCGTTCCTCC GCAGAGCAAG GAGGCAAACC CAAGCGCCGC 780
CGCATCATCG TGGCCTCAGA CAGCGACGGA TCAGACGAGG AGTTCAAACC AGAGCAAGCT 840
GCATCCACCA GCGAGGAAGA GGAGGAAGAG GCGACCATGA GCAGTGAAGA GGAGGAGAAG 900
GAGAGCAGCC AACAGTCGGA AGCAGACAGC CCAATGAAAC CTGTGAAGCG CAAACGTCCT 960
GCAGACAAAT CCGTTAGTAA GAAAGCAAAG ACGCCGGCTA CGCCCTCAGC TGGACCTAAA 1020
CGAGCTCCAA AGACGATCAC AGCTGACGCC AAAACCCGCT TGTCTGCCTT CTCCGCCCCA 1080
GACAGCTTCG AGAGCCAAGC AAACGGATCT GGTCCCGCCG GAGGAGCGAC AACCTGGGAT 1140
CATGAGAAGC TGGAATGGCT GCAGGACGGT CGGAGGAAGG ACGGGAAGAG ACGCCGTCAG 1200
AGTGAGGACG ACTACGACCC AACCACCCTG TACGTCCCCG AAGACTTCCT GAACAGAAAC 1260
ACTCCTGGGA TGCGCCGCTG GTGGCAGCTG AAGTCTGGGA TGTTTGACAC GGTGATTTTC 1320
TACAAGGTGG GAAAGTTTTA CGAGCTGTAC CACATGGACG CCGTGATTGG TGTCAACGAG 1380
CTCGGCCTGA CATTCATGAA AGGCACGTGG GCGCACTCCG GCTTCCCAGA AATCGGCTTT 1440
GCGCGTTTCT CAGACGTGTT GGTGCAGAAG GGCTACAAGG TGGCCCGCGT GGAGCAAACA 1500
GAGACCCCAG AAATGATGGA AGCGCGCTGC AAGACCATGG CCAAGCCCAC GAAGTTCGAC 1560
CGCGTCGTCA GAAGGGAAGT CTGCCGGATT ATCACCCGCG GTACCCAAAC CTACAGCGTG 1620
TTGGACGGCG CTCCTTCAGA GAGCCAGAGC AAGTTCCTCC TGAGCTTAAA GGAAAAGGCT 1680
GAAGACGAGA GCTCTGGACG CCATCGCACC TATGGCGTTT GCTTCGCAGA CACATCAGTG 1740
GGATATTTCC ACATCGGTCA GTTCTCAGAT GATCGCCACT GCTCACGGCT ACGCACCTTA 1800
ATTGCACACT TCCCACCTGC TGAGGTCCTC TTCGAAAAGA GTAACCCGTC TGCCGAGACC 1860
CGCAAAATCT TGAAGGCGTC TCTGTCCTCC GCGCTGCAGG AAGGGCTGAA CGCAGGAACA 1920
CAGTTTTGGG ATGCTCAGAA GACGCTGAAA ACCCTCTCAG AGGAGAATTA CTTTGAGGAG 1980
GCGGCTGGAG ACGGATTCCT CCCTGCGCTC CTGCGGAGGA TGACCTCGGA GAGCGACTCC 2040
TTGTGTCTGT CCCCTAAGGA AGGCTACGAG TTGGCTCTGT CGGCTTTAGG CGGCTGCATC 2100
TTCTACCTGA AGAAATGTCT GGTCGACAAA GAGCTGCTCT CCATGGCCAA CTTTGAAGAG 2160
TATGTCCCTG TTGATGTGGA GTTAGAGAAA GCTGCTGGAC CTGCCAGTTT TTTCTCCCAG 2220
ACCCGTCAGC GGATGGTCCT GGACGGTGTG ACGCTGGCGA ACCTGGAGAT CTTCCAGAAC 2280
GGTTCAGGGG GAACTGAAGG GACGCTGTTG GAGCGTTTAG ACTCCTGCTC TACTCCGTTT 2340
GGTAAGAGGT TGCTGAAGCA GTGGCTCTGC GCTCCGTTGT GTAACCCCGC CTCCATCAGG 2400
GACAGGCTGG ACGCCATGGA CGACCTGATT GCAGCGCAGG CTCAGGCCGC CGACGTCTCA 2460
GAGCTGCTGA AGAAGCTTCC AGATCTGGAG CGGCTTTTGA GTAAAATCCA CAGCATTGGC 2520
ACCCCTCTGA AGGGCCAGGA CCACCCGGAC TCTAGAGCGG TGCTCTATGA GGAAGTCACC 2580
TATAGCAAGC GCAAGATTGC TGATTTCCTA TCAGCGCTAG AAGGCTTCAA AACCATGCAA 2640
GAGATCATTT CTGCTTTCAC TCCGGCTACA GGCGACATTC GCTCCACGCT GCTTCGTCAG 2700
ATTGTCAGCC TGAAGACAGA AGAGGACGGC CTCTTCCCAG ATCTGTCAGC AGAGCTGAAG 2760
CGCTGGGAAA CAGCTTTCGA CCACCAGAAA GCCCGCACCA CTGGAGTCAT AACCCCTAAG 2820
ACCGGCTTCG ATCCGGAGTT CGACCAGGCT CTAGCAGGAA TCAAAACCTG CGAACGGGAC 2880
CTGCAGGACT ATCTGGAGCG GCAGAAGAAG AGGCTCGGCT GTAAGAACAT GGCGTACTGG 2940
GGAACCGGGC GGAACCGCTT TCAGATGGAA GTTCCCAACA GTGTTTCGGA GAGGAACATC 3000
CCCGAGGAGT ATGAAGTGAA ATCCACCAAG AAAGGCTATA AGCGCTACGT GACGAAGGAG 3060
AGCGAGCGGC TCTTCTCAGA GCTGCAGGGA TTCGAAGAGA AGAGAGACGC AGCGCTGAAG 3120
GACTGCATGA GGAGGCTCTT CTACAACTTT GACAAGAACT ACAGAGACTG GAGGACGGCT 3180
GTGGAATGCA TGGCCGTGCT GGATGTTCTG CTGGCTTTGT CCCGCTACAG TCTGGGTGGC 3240
GACGGGCCGA TGGCCAGACC CCAGGTGGTT CTACCAGAGG ACAATGACCG CAGCACGCCC 3300
TTCATTAACC TCACCGGATC CCGTCACCCG TGTGTGACTA AAACGTTTTT TGGGGATGAC 3360
TTCATTCCTA ATGACATCTT TATCGGTTGC CCTGGGAACA GTGAAGGTGA TGAGGTGGAA 3420
GGTCGCGCCT CATGTGTCCT TGTAACGGGT CCAAACATGG GGGGGAAATC TACCCTAATG 3480
AGACAGTGTG GACTTGTGAT TATCCTAGCT CAGCTCGGAT GCTACGTTCC AGCTGAGAGC 3540
CTTTGCTTCA CTCCAGTCGA TCGGGTCTTC ACTCGGCTGG GAGCATCAGA TCGAATTATG 3600
GCTGGTGAGA GCACCTTCTA CGTGGAGCTC AGTGAGACGG CCAGCATCCT GCACCACGCC 3660
ACCAGGCACT CTCTGGTGCT CCTTGATGAA CTCGGAAGGG GCACGGCTAC ATATGACGGC 3720
ACAGCCATCG CCAGCGCTGT TGTGAAGGAG CTTGCTGATA AGATCTGCTG TCGCACTCTG 3780
TTCTCCACGC ATTACCACTC CCTAGTGGAG GACTATGCTA ACAACGCCAC TGTGCGACTG 3840
GGCCACATGG CGTGCATGGT GGAGAACGAA TGTGAGGATC CCAGTCAGGA AACCATCACG 3900
TTCCTCTACA AGTTCATCAC CGGCGCTTGT CCGAAGAGCT ACGGCTTCAA CGCGGCGCGG 3960
CTCGCCAACC TGCCAGAGGA GGTCATCCAG TCTGGACACA GGAAGGCCAG AGAGTTTGAG 4020
AGAAGCACCA TCAGCCTCAG ACTATTCAGG AAACTCTGCC AGTTCGCTGA AGATGCTGCT 4080
CCAGACAACG CACGCTTCAC TTCACTCGTT CAACTGCTTA ACACCCTGTA G 4132
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 96 0.0 2501
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 82 0.0 2204
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 82 0.0 2170
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 80 0.0 2101
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 78 0.0 2071
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 78 0.0 2011
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 77 0.0 1974
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 71 0.0 1820
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 73 0.0 1760
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 65 0.0 1695
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 65 0.0 1650
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 63 0.0 1587
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 63 0.0 1574
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 63 0.0 1566
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 64 0.0 1560
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 62 0.0 1557
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 62 0.0 1556
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 62 0.0 1553
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 63 0.0 1551
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 60 0.0 1550
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 62 0.0 1550
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 62 0.0 1549
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 63 0.0 1548
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 61 0.0 1543
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 61 0.0 1541
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 62 0.0 1540
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 62 0.0 1540
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 62 0.0 1539
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 63 0.0 1537
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 62 0.0 1535
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 62 0.0 1535
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 63 0.0 1534
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 62 0.0 1533
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 61 0.0 1530
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 62 0.0 1529
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 61 0.0 1528
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 62 0.0 1528
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 62 0.0 1527
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 61 0.0 1525
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 61 0.0 1524
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 59 0.0 1521
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 61 0.0 1513
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 62 0.0 1511
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 60 0.0 1498
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 59 0.0 1459
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 60 0.0 1410
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 56 0.0 1358
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 67 0.0 1180
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 46 0.0 1077
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 56 0.0 1000
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 67 0.0 934
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 58 0.0 862
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 69 0.0 751
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 67 0.0 712
WERAM-Met-0160 AES82183 Medicago truncatula 40 0.0 634
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 62 2e-157 554
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 61 9e-149 525
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 78 1e-131 469
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 63 2e-113 408
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 59 2e-104 378
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 68 2e-46 186
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 41 2e-10 66.6
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 43 2e-10 66.6
WERAM-Fia-0085 ENSFALP00000006989.1 Ficedula albicollis 45 4e-10 65.5
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 39 1e-09 63.5
Created Date 25-Jun-2016