WERAM Information

Tag Content
WERAM ID WERAM-Dar-0233
Ensembl Protein ID ENSDARP00000130154.1
Gene Name msh6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDARG00000104541.1 ENSDART00000162531.1 ENSDARP00000130154.1
ENSDARG00000104541.1 ENSDART00000171080.1 ENSDARP00000131172.1
ENSDARG00000104541.1 ENSDART00000165311.1 ENSDARP00000133896.1
ENSDARG00000104541.1 ENSDART00000161959.1 ENSDARP00000140704.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 1.10e-18 68.2 87 148
Organism Danio rerio
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           ag+LVwaK++g pwWP++v+ +pl ++++ +   ++++++V FF++ ++r wv  k + +y++
  ENSDARP00000130154.1  87 AGSLVWAKMEGHPWWPCMVVPQPLSGQQM-RGRGRDQRLHVHFFDEPPTRGWVNTKYIREYQD 148
                           599************************99.999***************************985 PP
Protein Sequence
(Fasta)		MAKQSSLFNF FSKSPPLAVK AKSSPSPAEG DAPGRSNTSP KEEAKVNSKK TPAKPPSKTQ 60
AIAGHAKLFG EKAATTKERK QSPVFSAGSL VWAKMEGHPW WPCMVVPQPL SGQQMRGRGR 120
DQRLHVHFFD EPPTRGWVNT KYIREYQDVL LSMCRYSQSA DGSMARPEMA LPGDGSYSAP 180
FLDLRGSRHP CVTKTFFGDD FIPNDIFIGC PGDEEEAQDD TKALAPCVLV TGPN 234
Nucleotide Sequence
(Fasta)		CTCTCAGCTC CGCTACAACT GTAGGGCAGT TCTGAGTCTG CTGGGACAGA AGAAATGAAT 60
TAATTTGGAA TAACTAAACA ACACGTTTCA AGACGACATG GCAAAGCAAA GTTCCCTCTT 120
TAACTTCTTC TCAAAGTCGC CTCCTCTCGC GGTGAAGGCC AAATCCAGCC CATCACCAGC 180
AGAAGGAGAT GCGCCGGGCA GATCCAACAC TTCACCCAAG GAAGAAGCTA AAGTCAACAG 240
CAAGAAAACA CCTGCAAAAC CGCCCTCAAA AACCCAAGCT ATAGCCGGAC ACGCAAAGCT 300
ATTCGGGGAG AAAGCGGCCA CTACAAAGGA AAGGAAACAG TCACCTGTAT TTAGTGCTGG 360
CTCACTGGTA TGGGCCAAGA TGGAGGGGCA TCCCTGGTGG CCCTGTATGG TTGTTCCTCA 420
GCCTCTCAGC GGACAACAGA TGAGGGGTCG AGGCCGAGAC CAAAGGCTTC ATGTTCACTT 480
TTTTGATGAA CCACCAACCC GAGGATGGGT GAACACAAAA TACATAAGAG AGTACCAAGA 540
TGTGCTGCTG AGCATGTGCC GGTACAGTCA GAGCGCTGAC GGGTCCATGG CCAGACCAGA 600
GATGGCTCTT CCAGGCGACG GCTCTTATTC GGCCCCATTC CTGGATCTGA GGGGGTCTCG 660
TCACCCTTGT GTCACCAAGA CCTTCTTCGG GGATGACTTT ATCCCTAATG ACATCTTCAT 720
CGGCTGTCCT GGTGATGAAG AAGAGGCTCA AGATGATACC AAAGCACTTG CACCATGTGT 780
ACTAGTCACC GGACCAAACA T 802
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 66 3e-44 175
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 66 1e-42 170
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 63 4e-42 168
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 63 4e-41 165
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 62 3e-39 158
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 60 4e-39 158
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 63 2e-38 155
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 62 3e-36 149
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 65 4e-36 148
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 60 2e-31 133
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 64 2e-26 116
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 64 4e-26 115
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 63 5e-26 114
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 64 7e-26 114
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 62 4e-25 112
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 62 4e-25 112
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 63 9e-25 110
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 61 9e-25 110
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 63 9e-25 110
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 63 9e-25 110
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 63 1e-24 110
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 63 1e-24 110
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 63 1e-24 110
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 63 1e-24 110
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 62 1e-24 110
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 59 6e-24 108
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 46 7e-24 107
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 60 7e-24 107
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 61 7e-24 107
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 62 9e-24 107
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 60 1e-23 107
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 60 3e-23 105
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 60 4e-23 105
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 61 4e-23 105
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 61 6e-23 104
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 57 9e-23 104
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 57 9e-23 104
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 57 3e-22 102
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 57 4e-22 102
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 57 8e-22 101
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 61 8e-22 100
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 57 8e-22 100
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 56 9e-22 100
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 61 1e-21 100
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 56 2e-21 99.8
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 60 2e-21 99.4
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 47 2e-21 99.4
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 55 4e-21 98.6
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 56 9e-21 97.4
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 55 1e-20 97.4
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 54 3e-20 95.9
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 54 1e-19 94.0
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 40 2e-18 90.1
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 38 4e-17 85.5
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 37 4e-16 82.0
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 55 1e-14 77.0
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 55 2e-14 76.6
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 55 2e-14 76.6
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 35 2e-14 76.3
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 44 4e-12 68.9
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 42 2e-10 63.5
WERAM-Fia-0085 ENSFALP00000006989.1 Ficedula albicollis 42 3e-10 62.4
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 41 4e-10 62.4
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 33 2e-08 56.6
Created Date 25-Jun-2016