WERAM Information

Tag Content
WERAM ID WERAM-Poa-0108
Ensembl Protein ID ENSPPYP00000013873.2
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPPYG00000012425.2 ENSPPYT00000014433.2 ENSPPYP00000013873.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 3.70e-23 81.5 94 155
Organism Pongo abelii
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ +++V+FF+++++r wv+++ l+py++
  ENSPPYP00000013873.2  94 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTG 155
                           69***************************.*******************************86 PP
Protein Sequence
(Fasta)		MSRQSTLYSF FPKSPALSDA NKASSRASRE GGRAAAAPGA SPSPGGDAAW SEAGPGPRPR 60
PLARSASPPK AKNLNGGLRR SAAPAAPTSC DFSPGDLVWA KMEGYPWWPC LVYNHPFDGT 120
FIREKGKSVR VHVQFFDDSP TRGWVSKRLL KPYTGSKSKE AQKGGHFYSA KPEILRAMQR 180
ADEALNKDKI KRLELAVCDE PSEPEEEEEM EVGTTYVTDK SEEDNEIESE EEVQPKTQGS 240
RRSSRQIKKR RVISDSESDI GGSDVEFKPD TKEEGSSDEI SSGVGDSESE GLNSPVKVAR 300
KRKRMVTGNG SLKRKSSRKE TPSATKQATS ISSETKNTLR AFSAPQNSES QAHVSGGGDD 360
SSRPTVWYHE TLEWLKEEKR RDEHRRRPDH PDFDASTLYV PEDFLNSCTP GMRKWWQIKS 420
QNFDLVICYK VGKFYELYHM DALIGVTELG LVFMKGNWAH SGFPEIAFGR YSDSLVQKGY 480
KVARVEQTET PEMMEARCRK MAHISKYDRV VRREICRIIT KGTQTYSVLE GDPSENYSKY 540
LLSLKEKEED SSGHTRAYGV CFVDTSLGKF FIGQFSDDRH CSRFRTLVAH YPPVQVLFEK 600
GNLSKETKTI LKSSLSSSLQ EGLLPGSQFW DASKTLRTLL EEGYFREKLS DDIGVMLPQV 660
LRGMTSESDS IGLTPGEKSE LALSALGGCV FYLKKCLIDQ ELLSMANFEE YIPLDSDTVS 720
TTRSGAIFTK AYQRMVLDAV TLNNLEIFLN GTNGSTEGTL LERVDTCHTP FGKRLLKQWL 780
CAPLCNPFAI NDRLDAIEDL MVVPDKISEV VELLKRLPDL ERLLSKIHNV GSPLKSQNHP 840
DSRAIMYEET TYSKKKIIDF LSALEGFKVM CKIIGIMEEV ADGFKSKILK QVISLQTKNP 900
EGRFPDLTVE LNRWDTAFDH EKARKTGLIT PKAGFDSDYD QALADIRENE QSLLEYLEKQ 960
RNRIGCRTIV YWGIGRNRYQ LEIPENFTTR NLPEEYELKS TKKGCKRYWT KTIEKKLANL 1020
INAEERRDVS LKDCMRRLFY NFDKNYKDWQ SAVECIAVLD VLLCLANYSR GGDGPMCRPV 1080
ILLPEDTRPF LKLKGSRHPC ITKTFFGDDF IPNDILIGCE EEEQENGKAY CVLVTGPNMG 1140
GKSTLMRQAG LLAVMAQMGC YVPAEVCRLT PIDRVFTRLG ASDRIMSGES TFFVELSETA 1200
SILMHATAHS LVLVDELGRG TATFDGTAIA NAVVKELAET IKCRTLFSTH YHSLVEDYSQ 1260
NVAVRLGHMA CMVENECEDP SQETITFLYK FIKGACPKSY GFNAARLANL PEEVIQKGHR 1320
KAREFEKMNQ SLRVFREVCL ASERSTVDAE AVHKLLTLIK EL 1362
Nucleotide Sequence
(Fasta)		GGCCGCTGGT GCCCGGGTTC CTCCGGCGGA GCGCACCTCC CCCCAGGTTT CCCGCCAGCA 60
GGAGCGCGGT AGATGCGGTG CTTTTAGGCG CTCCGTCCGA CAGAACGGTT GGGCCTTGCC 120
GGCTGTCGCT ATGTCGCGAC AGAGCACCCT GTACAGCTTC TTCCCCAAGT CTCCGGCGCT 180
GAGTGATGCC AACAAGGCCT CGTCCAGGGC CTCACGCGAA GGCGGCCGTG CCGCCGCTGC 240
CCCCGGGGCC TCTCCTTCCC CAGGCGGGGA TGCGGCCTGG AGCGAGGCTG GGCCTGGGCC 300
CAGGCCCAGG CCCTTGGCGC GCTCCGCGTC GCCGCCCAAG GCGAAGAACC TCAACGGAGG 360
GCTGCGGAGA TCGGCAGCGC CTGCTGCCCC CACCAGTTGT GACTTCTCAC CAGGAGATTT 420
GGTTTGGGCC AAGATGGAGG GTTACCCCTG GTGGCCTTGT CTGGTTTACA ACCACCCGTT 480
TGATGGAACA TTCATCCGCG AGAAAGGGAA ATCAGTCCGT GTTCATGTAC AGTTTTTTGA 540
TGACAGCCCA ACAAGGGGCT GGGTTAGCAA AAGGCTTTTA AAGCCCTATA CAGGTTCGAA 600
ATCAAAGGAA GCCCAGAAGG GAGGTCATTT TTACAGTGCA AAGCCTGAAA TACTGAGAGC 660
AATGCAACGT GCAGATGAAG CCTTAAATAA AGACAAGATT AAGAGGCTTG AATTGGCAGT 720
TTGTGATGAG CCCTCAGAGC CAGAAGAGGA AGAAGAGATG GAGGTAGGCA CAACTTATGT 780
AACAGATAAG AGTGAAGAAG ATAATGAAAT TGAGAGTGAA GAGGAAGTAC AGCCTAAGAC 840
ACAAGGATCT AGGCGAAGTA GCCGCCAAAT AAAAAAACGA AGGGTCATAT CAGACTCTGA 900
GAGTGACATT GGTGGCTCTG ATGTGGAATT TAAGCCAGAC ACTAAGGAGG AAGGAAGCAG 960
TGATGAAATA AGCAGTGGCG TGGGGGATAG TGAGAGTGAA GGCCTGAACA GCCCTGTCAA 1020
AGTTGCTCGA AAGCGGAAGA GAATGGTGAC TGGAAATGGC TCTCTTAAAA GGAAAAGCTC 1080
TAGGAAGGAA ACGCCCTCAG CCACCAAACA AGCAACTAGC ATTTCATCAG AAACCAAGAA 1140
TACTTTGAGA GCTTTCTCTG CCCCTCAAAA TTCTGAATCC CAAGCCCACG TTAGTGGAGG 1200
TGGTGATGAC AGTAGTCGCC CTACTGTGTG GTATCATGAA ACCTTAGAAT GGCTTAAGGA 1260
GGAAAAGAGA AGAGATGAGC ACAGGAGGAG GCCTGATCAC CCCGATTTTG ATGCATCTAC 1320
ACTCTATGTG CCTGAGGATT TCCTCAATTC CTGTACTCCT GGGATGAGGA AGTGGTGGCA 1380
GATTAAGTCT CAGAACTTTG ATCTTGTCAT CTGTTACAAG GTGGGGAAAT TTTATGAGCT 1440
GTACCACATG GATGCTCTTA TTGGAGTCAC TGAACTGGGG CTGGTATTCA TGAAAGGCAA 1500
CTGGGCCCAT TCTGGCTTTC CTGAAATTGC ATTTGGCCGT TATTCAGATT CCCTGGTGCA 1560
GAAGGGCTAT AAAGTAGCAC GAGTGGAACA GACTGAGACT CCAGAAATGA TGGAGGCACG 1620
ATGTAGAAAG ATGGCACATA TATCCAAGTA TGATAGAGTG GTGAGGAGGG AGATCTGTAG 1680
GATCATTACC AAGGGTACAC AGACTTACAG TGTGCTGGAA GGTGATCCCT CTGAGAACTA 1740
CAGTAAGTAT CTTCTTAGCC TCAAAGAAAA AGAGGAAGAT TCTTCTGGCC ATACTCGTGC 1800
ATATGGTGTG TGCTTTGTTG ATACTTCACT GGGAAAGTTT TTCATAGGTC AGTTTTCAGA 1860
TGATCGCCAT TGTTCGAGAT TTAGGACTCT AGTGGCACAC TATCCCCCGG TACAAGTCTT 1920
ATTTGAAAAA GGAAATCTCT CAAAGGAAAC TAAAACAATT CTAAAGAGTT CATTGTCCTC 1980
TTCTCTTCAG GAAGGTCTGC TACCTGGCTC CCAGTTTTGG GATGCATCCA AAACTTTGAG 2040
AACTCTCCTT GAGGAAGGCT ATTTTAGGGA AAAGCTAAGT GATGACATTG GGGTGATGTT 2100
ACCCCAGGTG CTTAGAGGTA TGACTTCAGA GTCTGATTCC ATTGGGTTGA CACCAGGAGA 2160
GAAAAGTGAA TTGGCCCTCT CTGCTCTAGG TGGTTGTGTC TTCTACCTCA AAAAATGCCT 2220
TATTGATCAG GAGCTTTTAT CAATGGCTAA TTTTGAAGAA TATATTCCCT TGGATTCTGA 2280
CACAGTCAGC ACTACAAGAT CTGGTGCTAT CTTCACCAAA GCCTATCAAC GAATGGTGCT 2340
AGATGCAGTG ACATTAAACA ACTTGGAGAT TTTTCTGAAT GGAACAAATG GTTCTACTGA 2400
AGGAACCCTA CTAGAGAGGG TTGATACTTG CCATACTCCT TTTGGTAAAC GGCTCCTAAA 2460
GCAATGGCTT TGTGCCCCAC TCTGTAACCC TTTTGCTATT AATGATCGTC TAGATGCCAT 2520
AGAAGACCTC ATGGTTGTGC CTGACAAAAT CTCCGAAGTT GTAGAGCTTC TAAAGAGGCT 2580
TCCAGATCTT GAGAGACTAC TCAGTAAAAT TCATAATGTT GGGTCTCCCC TGAAGAGTCA 2640
GAACCACCCA GACAGCAGGG CTATAATGTA TGAAGAAACT ACATACAGCA AAAAGAAGAT 2700
TATTGATTTT CTTTCTGCTC TGGAAGGATT CAAAGTAATG TGTAAAATTA TAGGGATCAT 2760
GGAAGAAGTC GCTGATGGTT TTAAGTCTAA AATCCTTAAG CAGGTCATCT CTCTGCAGAC 2820
AAAAAATCCT GAAGGTCGTT TTCCTGATTT GACTGTAGAA TTGAACCGAT GGGATACAGC 2880
CTTTGACCAT GAAAAGGCTC GAAAGACTGG ACTTATTACT CCCAAAGCAG GCTTTGACTC 2940
TGATTATGAC CAAGCTCTTG CTGACATAAG AGAAAATGAA CAGAGCCTCC TGGAATACCT 3000
AGAGAAACAG CGCAACAGAA TTGGCTGTAG GACCATAGTC TACTGGGGGA TTGGTAGGAA 3060
CCGTTACCAG TTGGAAATTC CTGAGAATTT CACCACTCGC AATTTGCCAG AAGAATACGA 3120
ATTGAAATCT ACCAAGAAGG GCTGTAAACG ATACTGGACC AAAACTATTG AAAAGAAGTT 3180
GGCTAATCTC ATAAATGCTG AAGAACGGAG AGATGTATCA TTGAAGGACT GCATGCGGCG 3240
ACTGTTCTAT AACTTTGATA AAAATTACAA GGACTGGCAG TCTGCTGTAG AGTGTATTGC 3300
AGTGTTGGAT GTCTTACTGT GCCTGGCTAA CTATAGTCGA GGGGGTGATG GTCCTATGTG 3360
TCGCCCAGTA ATTCTGTTGC CAGAAGATAC CCGCCCCTTC TTAAAGCTTA AAGGATCACG 3420
CCATCCTTGC ATTACGAAGA CTTTTTTTGG AGATGATTTT ATTCCTAATG ACATTCTAAT 3480
AGGCTGTGAG GAAGAGGAGC AGGAAAATGG CAAAGCCTAT TGTGTGCTTG TTACTGGACC 3540
AAATATGGGG GGCAAGTCTA CGCTTATGAG ACAGGCTGGC TTATTAGCTG TAATGGCCCA 3600
GATGGGTTGT TACGTCCCTG CTGAAGTGTG CAGGCTCACA CCAATTGATA GAGTGTTTAC 3660
TAGACTTGGT GCCTCAGACA GAATAATGTC AGGTGAAAGT ACATTTTTTG TTGAATTAAG 3720
TGAAACTGCC AGCATACTCA TGCATGCAAC AGCACATTCT CTGGTGCTTG TAGATGAATT 3780
AGGAAGAGGT ACTGCAACAT TTGATGGGAC AGCAATAGCA AATGCAGTTG TTAAAGAACT 3840
TGCTGAGACT ATAAAATGTC GTACATTATT TTCAACTCAC TACCATTCAT TAGTAGAAGA 3900
TTATTCTCAA AATGTTGCTG TGCGCCTAGG ACATATGGCA TGCATGGTAG AAAATGAATG 3960
TGAAGACCCC AGCCAGGAGA CTATTACCTT CCTCTATAAA TTCATTAAGG GAGCTTGTCC 4020
TAAAAGCTAT GGTTTTAATG CAGCAAGGCT TGCTAATCTC CCAGAGGAAG TTATTCAAAA 4080
GGGACATAGA AAAGCAAGAG AATTTGAGAA GATGAATCAG TCACTACGAG TATTTCGGGA 4140
AGTTTGCCTG GCTAGTGAAA GGTCAACTGT AGATGCTGAA GCTGTCCATA AATTGCTGAC 4200
TTTGATTAAG GAATTATAG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 98 0.0 2446
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 97 0.0 2430
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 97 0.0 2430
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 99 0.0 2411
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 97 0.0 2410
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 99 0.0 2377
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 95 0.0 2354
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 92 0.0 2300
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 92 0.0 2300
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 92 0.0 2296
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 91 0.0 2289
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 91 0.0 2289
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 91 0.0 2283
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 90 0.0 2272
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 90 0.0 2256
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 89 0.0 2254
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 91 0.0 2251
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 93 0.0 2237
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 90 0.0 2232
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 90 0.0 2229
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 88 0.0 2220
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 93 0.0 2197
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 87 0.0 2188
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 85 0.0 2159
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 84 0.0 2147
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 91 0.0 2106
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 81 0.0 1969
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 80 0.0 1955
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 70 0.0 1716
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 65 0.0 1707
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 70 0.0 1701
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 71 0.0 1693
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 71 0.0 1687
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 65 0.0 1666
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 90 0.0 1666
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 73 0.0 1583
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 63 0.0 1580
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 62 0.0 1561
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 90 0.0 1555
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 60 0.0 1528
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 59 0.0 1513
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 66 0.0 1420
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 67 0.0 1416
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 67 0.0 1409
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 61 0.0 1393
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 66 0.0 1384
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 67 0.0 1383
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 68 0.0 1361
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 91 0.0 1348
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 92 0.0 1278
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 58 0.0 1221
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 50 0.0 989
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 95 0.0 967
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 89 0.0 953
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 93 0.0 823
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 90 0.0 794
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 83 0.0 723
WERAM-Met-0160 AES82183 Medicago truncatula 40 0.0 642
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 94 1e-179 628
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 94 1e-166 585
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 63 8e-24 110
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 5e-12 71.6
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 9e-12 70.9
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 35 3e-11 68.9
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 34 7e-11 67.8
WERAM-Sei-0090 Si024584m Setaria italica 35 5e-06 51.6
Created Date 25-Jun-2016