WERAM Information

Tag Content
WERAM ID WERAM-Tar-0161
Ensembl Protein ID ENSTRUP00000034377.1
Gene Name msh6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTRUG00000013478.1 ENSTRUT00000034503.1 ENSTRUP00000034377.1
ENSTRUG00000013478.1 ENSTRUT00000034504.1 ENSTRUP00000034378.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 7.00e-18 65.7 96 155
Organism Takifugu rubripes
Domain Profile
  Me_Reader PWWP
              PWWP.txt   2 gdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpys 62 
                           g LVwaKl+gYpwWP++v+ +pl ++++ +   ++++ +V FF++ ++r wv+ k + +y 
  ENSTRUP00000034377.1  96 GALVWAKLEGYPWWPCMVVPQPLSGQQM-RGRGRDQRIHVHFFDEPPTRGWVSTKYVREYR 155
                           78************************99.999*************************9996 PP
Protein Sequence
(Fasta)		MAKQSSLFNF FTKSPPPVSK PKPSPSPAEA DLPSSVANSN SSPKEQAKET QHQKKAKTGG 60
LAQKNNPKPV KLGFNKLFGD KAPATKQTSQ CPFNAGALVW AKLEGYPWWP CMVVPQPLSG 120
QQMRGRGRDQ RIHVHFFDEP PTRGWVSTKY VREYRGRSDS SDAKPGGLFF CGKPVIQQAM 180
KLADEVMSDS PDERLTMPLC VDPSDEEGEE EMEVDKSTIS EEEFSEEEQE PENEKSMKGS 240
RRSSRASAIK GNKSKRRRII EASDSDESDD EFKPEQAASS SEDEEEGAAV SSEEEGTAQE 300
TEEDSPVKPT KRKRPAGKPA PTKAKVPLTP SNPPKRAPAA VSADTKSRLS AFSAPESFES 360
QASGSGVEGE ATVWDHEKLE WLRDGRRKDG GRRRQGCEDY DPSTLYVPED FLNRITPGMR 420
RWWQLKSKMF DTVIFYKVGK FYELYHMDAV IGVNELGLTF MKGTWAHSGF PEIGFGRFSD 480
GLVQKGYKVA RVEQTETPEM MEARCKAMAK PTKFDRVVRR EVCRIITRGT QTYSVLDGAP 540
SESQSKFLLS LKEKAEEESS GRSRTYGVCF VDTSVGYFHV GQFPDDRHCS RLRTLIAHHS 600
PAEVLFEKGN PSVETRKILK ASLSSALQEG LSAGTQFWDA QKTLKTLSEE DYFREGADKG 660
QAGGNNSPPP LLKQMTSESD ALGLTPKDGY DLALSALGGC IFYLKKCLVD QELLSMANFE 720
EYVPVDVEME KAAGPASFFA QTRQRMVVDG VTLANLEIFQ NGSGGSEGTL LERLDTCCTL 780
FGKRLLKQWL CAPLCNPLSI KDRLDAVEDL MGLQAQAGEV SDLLKKLPDL ERLLSKIHGI 840
GTPLKGQDHP DSRAVLYEEV TYSKRKIADF LSALEGFKTM QEIISVLASV SGDCQSTLLR 900
QVVSLKGEGG GLFPDLSAEL RRWETAFDHQ KARTTGVITP KAGFDPEYDQ ALAGIKTCEG 960
ELNDYLDRQK KRLGCKNMAY WGTGRNRYQM EVPDSVSDRN IPREYEVKST KKGWKRYVTR 1020
ETERLFSELQ GFEEKRDSAL KDCMRRLFYN FDQNYKDWKT AVECMAVLDV LLAFSRYSQG 1080
GDGPMARPEA VLPDSDRAPF LELAGSRHPC VTKTFFGDDF IPNDIFIGCL DSREEEGDGD 1140
ATCVLVTGPN MGGKSTLMRQ CGLVVILAQL GCFVPAERLR FTPVDRVFTR LGASDRIMSG 1200
ESTFFVELSE TASILHHATK HSLVLLDELG RGTATYDGTA IASAVVNELA ERIRCRTLFS 1260
THYHSLVEDY AKNPAVRLGH MACMVENECE DPSQETITFL YKFVSGACPK SYGFNAARLA 1320
NLPEEVIQCG HDKAREFERS TGSLRLFRKI CQFVEDKTLD NAYFASLIQM LHNL 1374
Nucleotide Sequence
(Fasta)		AACACGGCGA CAGTGTTGTT GTGCAAGGAT CTCACACGCT CTGCGAAAAA AAGCCCTTTG 60
AGTCGCTCAC ATGGCGAAGC AAAGCTCCCT CTTTAATTTT TTCACCAAGT CTCCACCGCC 120
GGTATCGAAG CCGAAGCCGA GTCCTTCGCC TGCCGAAGCA GATTTGCCTT CTTCCGTAGC 180
GAATTCCAAC TCGTCTCCAA AAGAGCAAGC TAAAGAGACG CAGCACCAGA AGAAAGCAAA 240
GACCGGCGGC CTTGCACAGA AGAACAACCC CAAACCCGTA AAACTCGGAT TCAACAAGCT 300
GTTTGGTGAC AAGGCTCCAG CGACGAAACA AACCTCCCAG TGCCCATTTA ACGCTGGCGC 360
CCTCGTGTGG GCAAAACTGG AAGGTTACCC GTGGTGGCCG TGCATGGTGG TGCCCCAGCC 420
TCTGAGTGGG CAGCAGATGA GGGGCCGAGG ACGAGACCAA CGCATACATG TCCATTTCTT 480
CGATGAACCA CCTACTAGGG GATGGGTCAG CACCAAATAT GTCAGAGAGT ACCGAGGTCG 540
GTCTGACAGC AGCGACGCTA AACCAGGAGG CCTTTTCTTT TGTGGGAAAC CTGTAATCCA 600
ACAGGCAATG AAGCTTGCCG ACGAGGTGAT GTCCGACAGC CCCGACGAAA GGTTGACGAT 660
GCCTCTTTGT GTGGATCCGT CTGATGAAGA GGGTGAAGAA GAAATGGAGG TTGACAAGTC 720
AACCATCAGT GAGGAAGAGT TCAGTGAGGA AGAGCAGGAA CCTGAGAACG AGAAGTCGAT 780
GAAAGGCAGT CGCCGTTCGT CCCGTGCTTC GGCAATTAAA GGCAACAAGT CCAAGAGGCG 840
TCGCATAATC GAAGCCTCGG ACAGCGATGA GTCCGATGAC GAATTCAAAC CGGAGCAAGC 900
TGCGTCCAGC AGTGAGGATG AGGAGGAAGG AGCGGCAGTC AGCAGTGAAG AAGAGGGAAC 960
GGCCCAGGAG ACGGAAGAGG ACAGCCCCGT AAAGCCCACG AAGCGCAAGC GACCAGCGGG 1020
CAAACCGGCG CCCACGAAAG CCAAGGTCCC TCTAACTCCC TCCAATCCGC CCAAACGAGC 1080
TCCGGCGGCG GTTTCGGCGG ACACAAAGTC TCGTTTGTCA GCGTTCTCTG CGCCCGAGAG 1140
TTTCGAGAGC CAGGCCAGCG GATCGGGCGT GGAGGGAGAA GCCACGGTTT GGGACCACGA 1200
GAAGCTGGAG TGGCTGCGGG ACGGCAGGAG AAAAGACGGC GGGAGGCGTC GGCAGGGCTG 1260
CGAGGACTAC GACCCCTCCA CCCTGTACGT GCCAGAAGAC TTCCTGAACA GGATCACCCC 1320
GGGGATGCGC CGCTGGTGGC AGCTGAAGTC CAAGATGTTC GATACCGTCA TCTTCTACAA 1380
GGTCGGCAAG TTCTACGAGC TCTACCACAT GGATGCTGTG ATTGGCGTCA ATGAGCTGGG 1440
GCTGACCTTC ATGAAGGGCA CGTGGGCACA CTCGGGCTTC CCGGAGATCG GCTTCGGCCG 1500
TTTCTCCGAC GGGCTCGTCC AGAAAGGCTA CAAGGTGGCT CGGGTGGAGC AAACGGAGAC 1560
CCCGGAGATG ATGGAGGCGC GCTGCAAGGC CATGGCCAAG CCCACGAAGT TCGACCGCGT 1620
GGTCAGGAGG GAGGTGTGCA GGATCATCAC CCGCGGCACC CAGACCTACA GCGTGTTGGA 1680
CGGCGCTCCC TCCGAGTCCC AGAGCAAGTT CCTGCTCAGC CTGAAGGAGA AGGCGGAGGA 1740
GGAAAGCTCC GGGCGAAGCC GCACCTACGG CGTCTGCTTT GTGGACACCT CTGTGGGTTA 1800
CTTCCACGTA GGCCAGTTTC CGGACGACCG CCACTGCTCG CGCCTGCGCA CCCTGATCGC 1860
CCACCACTCG CCCGCCGAAG TGCTTTTCGA GAAGGGGAAC CCATCAGTGG AAACGCGCAA 1920
AATACTGAAG GCTTCTCTGT CCTCTGCTCT CCAGGAGGGA CTCAGCGCTG GGACGCAGTT 1980
CTGGGACGCT CAGAAGACCC TCAAAACCCT CTCTGAAGAG GATTACTTTA GAGAGGGTGC 2040
TGATAAAGGT CAGGCAGGGG GCAACAACAG TCCCCCGCCT CTCCTGAAGC AGATGACCTC 2100
TGAGAGCGAT GCACTGGGCC TCACGCCCAA AGACGGCTAC GACCTGGCGC TGTCGGCACT 2160
GGGCGGGTGC ATCTTCTACC TGAAGAAGTG TCTGGTGGAC CAGGAGCTAC TGTCCATGGC 2220
CAACTTTGAA GAATATGTGC CAGTGGACGT GGAGATGGAG AAAGCCGCCG GACCGGCCAG 2280
TTTCTTCGCC CAGACTCGTC AGAGGATGGT CGTCGATGGC GTGACTCTCG CTAATTTGGA 2340
AATCTTTCAG AACGGCTCGG GGGGAAGCGA AGGGACTTTG CTTGAGCGCT TGGACACCTG 2400
CTGCACCCTG TTTGGAAAGA GACTGTTGAA GCAGTGGCTC TGCGCTCCCC TGTGCAACCC 2460
GTTGTCTATT AAAGACCGGC TGGACGCGGT GGAAGACCTG ATGGGCCTTC AGGCCCAGGC 2520
CGGTGAGGTT TCAGACTTGC TAAAGAAGCT TCCAGATTTA GAGCGTCTGC TGAGCAAGAT 2580
CCACGGCATC GGCACCCCTC TGAAGGGCCA GGATCACCCC GACAGCAGAG CGGTCCTCTA 2640
CGAGGAGGTC ACCTACAGCA AGCGCAAGAT CGCGGACTTC CTGTCAGCGC TGGAGGGCTT 2700
CAAAACGATG CAGGAGATCA TCTCTGTTCT GGCTTCTGTC TCGGGGGACT GCCAGTCCAC 2760
ACTGCTCCGG CAGGTCGTCA GTCTGAAAGG CGAAGGAGGC GGGCTCTTTC CGGACCTTTC 2820
CGCCGAACTC AGACGCTGGG AAACGGCCTT CGACCACCAG AAAGCACGCA CCACGGGCGT 2880
CATCACCCCG AAAGCTGGCT TCGATCCCGA GTACGATCAG GCCCTGGCTG GTATCAAGAC 2940
CTGCGAAGGA GAGCTCAACG ATTACTTGGA CAGGCAGAAG AAGAGGCTTG GTTGTAAGAA 3000
CATGGCCTAC TGGGGGACGG GGCGGAACCG CTACCAAATG GAGGTGCCCG ACAGCGTCTC 3060
GGACAGGAAC ATTCCCCGGG AGTACGAGGT GAAGTCCACC AAGAAGGGCT GGAAGCGTTA 3120
CGTAACCAGG GAGACGGAGC GGCTGTTCTC TGAGCTGCAG GGGTTCGAGG AGAAGAGAGA 3180
CTCCGCGCTG AAAGACTGCA TGAGGAGGCT GTTCTACAAC TTTGACCAGA ACTACAAGGA 3240
CTGGAAGACT GCTGTGGAGT GCATGGCAGT GCTGGACGTG TTGCTGGCGT TCTCACGCTA 3300
CAGCCAGGGC GGAGACGGTC CGATGGCCAG ACCAGAGGCG GTGCTGCCCG ACAGTGACCG 3360
GGCACCCTTC TTGGAGCTGG CCGGGTCCCG CCATCCCTGC GTCACCAAGA CGTTTTTCGG 3420
CGACGACTTC ATCCCTAATG ACATCTTCAT TGGCTGCCTG GACAGCAGGG AAGAGGAGGG 3480
GGACGGCGAC GCCACCTGCG TCCTCGTCAC AGGACCGAAC ATGGGCGGGA AGTCCACTCT 3540
GATGAGACAG TGCGGACTGG TGGTCATCCT GGCCCAGCTG GGCTGTTTTG TTCCCGCTGA 3600
GAGGCTGCGC TTCACGCCGG TCGACAGGGT CTTCACCCGC CTGGGCGCCT CCGATCGCAT 3660
CATGTCCGGG GAGAGTACTT TCTTTGTGGA GCTCAGCGAG ACTGCTAGCA TCCTGCACCA 3720
CGCCACCAAG CACTCCCTTG TGCTCTTGGA CGAATTGGGA AGGGGCACGG CCACTTATGA 3780
CGGCACCGCC ATCGCCAGCG CCGTGGTGAA CGAGCTCGCC GAGAGGATCC GCTGCCGCAC 3840
CCTCTTCTCC ACGCACTACC ACTCCCTGGT GGAGGACTAC GCCAAAAACC CCGCCGTGAG 3900
GTTGGGCCAC ATGGCTTGTA TGGTGGAGAA TGAATGCGAG GATCCGAGTC AGGAGACGAT 3960
AACGTTCCTC TACAAATTCG TGTCCGGCGC CTGTCCAAAG AGCTACGGCT TCAACGCCGC 4020
CCGACTGGCC AACCTGCCGG AAGAGGTGAT TCAGTGCGGC CACGACAAGG CCAGGGAGTT 4080
TGAGCGGAGC ACCGGCAGCC TCCGACTGTT CAGGAAGATT TGCCAGTTTG TCGAAGACAA 4140
GACGCTGGAC AACGCCTACT TCGCCTCCCT CATCCAGATG CTTCACAACC TGTAG 4196
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 86 0.0 2111
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 81 0.0 2061
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 81 0.0 2038
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 80 0.0 2034
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 80 0.0 2013
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 79 0.0 1993
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 76 0.0 1893
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 70 0.0 1758
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 73 0.0 1693
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 66 0.0 1662
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 65 0.0 1595
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 63 0.0 1558
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 63 0.0 1557
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 63 0.0 1551
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 64 0.0 1544
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 62 0.0 1535
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 62 0.0 1524
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 64 0.0 1524
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 63 0.0 1523
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 63 0.0 1523
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 61 0.0 1522
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 60 0.0 1522
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 61 0.0 1519
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 63 0.0 1515
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 61 0.0 1513
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 62 0.0 1512
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 63 0.0 1511
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 62 0.0 1510
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 62 0.0 1508
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 60 0.0 1508
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 64 0.0 1506
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 63 0.0 1506
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 60 0.0 1504
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 62 0.0 1503
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 60 0.0 1502
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 62 0.0 1502
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 62 0.0 1500
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 63 0.0 1500
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 60 0.0 1498
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 60 0.0 1494
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 62 0.0 1487
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 62 0.0 1471
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 67 0.0 1423
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 59 0.0 1422
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 67 0.0 1418
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 61 0.0 1392
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 57 0.0 1340
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 67 0.0 1184
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 51 0.0 1019
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 56 0.0 974
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 69 0.0 972
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 58 0.0 829
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 69 0.0 744
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 69 0.0 712
WERAM-Met-0160 AES82183 Medicago truncatula 41 0.0 652
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 63 6e-161 566
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 62 1e-154 545
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 80 5e-135 480
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 63 8e-118 423
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 65 2e-96 351
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 65 3e-36 152
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 46 6e-11 68.2
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 42 7e-11 67.8
WERAM-Fia-0085 ENSFALP00000006989.1 Ficedula albicollis 46 2e-10 66.6
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 39 6e-09 61.6
Created Date 25-Jun-2016