WERAM Information

Tag Content
WERAM ID WERAM-Sah-0081
Ensembl Protein ID ENSSHAP00000009277.1
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSHAG00000008029.1 ENSSHAT00000009357.1 ENSSHAP00000009277.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 4.70e-21 74.8 7 68
Organism Sarcophilus harrisii
Domain Profile
  Me_Reader PWWP
              PWWP.txt  1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63
                          +gdLVwaK++gYpwWP+lv+++p e++ + ++  ++ +++V+FF++++ r wv ++ ++py++
  ENSSHAP00000009277.1  7 PGDLVWAKMEGYPWWPCLVYNHPTEGTFI-RERGKTFRVHVQFFDDNPVRGWVNKRLVKPYTG 68
                          69***************************.9999***************************86 PP
Protein Sequence
(Fasta)		SSCDFSPGDL VWAKMEGYPW WPCLVYNHPT EGTFIRERGK TFRVHVQFFD DNPVRGWVNK 60
RLVKPYTGSK CKEAQKGGPF YTAKPEILRA MQLADDAISI EKNKRLELAV CDEPSDPDEE 120
EMEVALASAS DNSGEDLESE EEVRPKRQMA KRSTARNKKM RVVSDSESDI GGSDVEFKPD 180
TKEEGSSDEA SSGMGESDSD MDSPVKAAPK RKRGTAVNSS LKRKSLGGCT SNVPKRVVGV 240
SSETKNTLNA FSAPQNFEAQ AQVSGGGDGS CGSTQWYHET LEWLKEGKRK DACRRRPDHP 300
DYDPNTVHVP EDFLNTCTPG MRRWWQIKSQ NFDLVIFYKV GKFYELYHMD AIIGVNELGL 360
VFMKGNWAHS GFPEIAFGRY SDSLVQKGYK VARVEQTETP EMMEARCRKL THISRFDRVV 420
RREICRIITK GTQTYSVLDG EPSESNNKYL LCVKEKEEEA SGHMRLYGVC FIDTSVGKFY 480
MGQFSDDRHC SRFRTLVAHY TPAQILFEKG NLSAETRKVL KVSLSSSIQE SLTPGSQFWD 540
AAKTLRTLLE EGYFKEKLNV ADGVVLPPVL KSMTSESDSI GLTPNEKSEL ALSALGGCVF 600
YLKKCLIDYE LLSMANFEEY IPVDADMVKA VKPGAIFGKR DCRMVLDAVT LSNLEILQNA 660
VNGSTEGTLL ERIDSCCTPF GKRLLKQWLC APLCNPSSIN DRLDAMEDLM AVPDKISEVV 720
DLLKKLPDLE RLLNKIHSVG SPLKSQKHPD SRAIMYEETT YSKKKIVDFL SALEGFKVMC 780
KIVGIMEEVV GNFKSKILKQ VITLRTQNSG GRFPELTTEL NRWDTAFDHE KARKTGIITP 840
KTGFDSDYDQ ALVDIKDNEQ SLLDYLEKQR KRIGCRSIVY WGVGKNRYQL EIPESFTLHD 900
LPGEYELKST KKGCKRYWTK DIEKKLADLM NAEERRDVSL KDCMRRLFFN FDKNYRDWQT 960
AVECIAVFDV LLCLANYSRG GEGPMCRPVI LVPDEETRPF LKLKGSRHPC VTNNFFGDDF 1020
IPNDIMIGCK EEDSEDSTWD AYCVLVTGPN MGGKSTLMRQ AGLLLIMAQM GCYVPAEVCS 1080
FTPVDRVFTR LGASDRIMSG ESTFFVEMNE TASILQHATE HSLVLMDELG RGTATFDGTA 1140
IANAVVKELA ETIKCRTLFS THYHSLVEDY SQNVAVCLGH MACMVENECE DPSQETITFL 1200
YKFTKGACPK SYGFNAARLA CLPEEIIQKG HRKAKEFEKM TQSLRLFREV CLALENSAAD 1260
VQAIHKLLTL IKEI 1274
Nucleotide Sequence
(Fasta)		AGCTCTTGTG ACTTCTCTCC TGGTGATTTG GTTTGGGCCA AGATGGAAGG TTACCCCTGG 60
TGGCCTTGCC TTGTGTATAA TCATCCCACT GAAGGAACAT TCATCAGAGA AAGGGGAAAA 120
ACTTTCCGTG TTCATGTACA ATTTTTTGAT GACAATCCAG TGAGGGGCTG GGTTAACAAA 180
AGGCTTGTAA AGCCCTATAC AGGTTCAAAA TGTAAGGAAG CCCAGAAAGG AGGTCCTTTT 240
TATACTGCAA AGCCTGAAAT ACTCAGAGCA ATGCAACTGG CAGATGATGC CATAAGTATA 300
GAGAAGAATA AGCGGCTTGA ATTAGCAGTA TGTGATGAGC CTTCAGATCC AGATGAGGAG 360
GAGATGGAGG TGGCTCTAGC TTCTGCATCA GATAATAGTG GAGAGGATCT AGAAAGTGAA 420
GAGGAAGTGA GACCCAAGAG GCAGATGGCT AAGCGTAGCA CAGCCCGGAA CAAAAAAATG 480
AGAGTTGTTT CAGACTCGGA GAGTGACATT GGTGGCTCTG ATGTAGAATT TAAGCCAGAT 540
ACCAAGGAGG AAGGGAGCAG TGATGAAGCA AGCAGTGGAA TGGGTGAAAG TGATAGTGAC 600
ATGGACAGTC CTGTCAAAGC TGCCCCAAAA CGGAAGAGAG GAACTGCTGT CAACAGCTCC 660
CTCAAGAGGA AAAGCTTGGG AGGTTGTACT TCTAATGTAC CCAAACGAGT AGTAGGAGTT 720
TCTTCAGAAA CTAAGAACAC TTTGAATGCT TTCTCTGCTC CACAGAACTT TGAGGCCCAA 780
GCCCAAGTCA GTGGAGGTGG TGATGGGAGC TGTGGCTCTA CTCAGTGGTA CCATGAAACA 840
CTAGAATGGT TAAAGGAGGG AAAGAGGAAA GATGCATGCA GGAGGCGTCC AGATCATCCT 900
GATTATGACC CAAACACTGT TCATGTTCCT GAGGATTTCC TTAATACCTG TACTCCAGGA 960
ATGAGAAGGT GGTGGCAAAT CAAGTCTCAG AACTTTGACC TAGTAATCTT CTATAAAGTA 1020
GGGAAGTTCT ATGAACTATA CCACATGGAT GCAATCATTG GGGTCAATGA GCTGGGGCTA 1080
GTGTTTATGA AAGGCAATTG GGCCCATTCA GGCTTCCCAG AAATTGCATT TGGTAGATAC 1140
TCTGATTCCC TGGTTCAGAA GGGTTACAAA GTTGCTCGAG TTGAGCAGAC AGAGACTCCT 1200
GAAATGATGG AAGCTCGCTG TCGAAAGTTG ACTCATATAT CCAGATTTGA TAGAGTGGTG 1260
CGGAGAGAAA TATGCAGAAT TATTACCAAG GGAACACAGA CTTATAGTGT GCTGGATGGT 1320
GAACCTTCTG AAAGCAACAA TAAGTATTTG CTATGTGTTA AAGAAAAAGA GGAGGAAGCT 1380
TCTGGTCACA TGCGTTTATA TGGTGTTTGC TTTATCGACA CCTCCGTGGG CAAGTTTTAT 1440
ATGGGTCAAT TTTCAGATGA CCGTCATTGC TCCCGATTTA GGACTCTGGT GGCACATTAT 1500
ACTCCTGCAC AAATACTGTT TGAGAAAGGA AATCTCTCTG CTGAAACAAG GAAGGTTCTG 1560
AAGGTGTCTC TATCTTCTTC CATTCAAGAA AGTCTGACTC CAGGCTCTCA GTTTTGGGAT 1620
GCAGCCAAAA CCTTGAGAAC ACTCCTTGAA GAAGGATACT TTAAAGAAAA GCTAAATGTG 1680
GCTGATGGGG TAGTATTACC CCCTGTGCTT AAAAGCATGA CATCAGAGTC TGACTCCATT 1740
GGCTTAACAC CTAATGAGAA GAGTGAACTG GCATTGTCTG CTTTGGGTGG TTGTGTCTTC 1800
TACCTCAAAA AATGCCTTAT CGATTATGAG CTTTTGTCTA TGGCCAACTT TGAAGAATAC 1860
ATTCCTGTTG ATGCTGATAT GGTAAAAGCT GTAAAGCCTG GTGCCATCTT TGGTAAGAGA 1920
GATTGTCGAA TGGTACTAGA TGCTGTGACC CTCAGCAACC TGGAGATTCT CCAGAATGCA 1980
GTAAATGGCT CCACTGAAGG GACGCTGTTA GAGAGGATTG ATAGTTGCTG TACTCCCTTT 2040
GGGAAGCGGC TCCTAAAACA GTGGCTTTGT GCTCCACTTT GTAACCCATC CTCAATCAAT 2100
GACCGTTTAG ATGCAATGGA AGATCTCATG GCTGTGCCTG ACAAGATTAG TGAAGTAGTT 2160
GACCTTCTGA AGAAGCTTCC AGACCTTGAG AGACTGTTGA ACAAGATTCA TAGTGTTGGC 2220
TCTCCACTAA AGAGTCAGAA GCACCCAGAC AGCAGAGCCA TAATGTATGA AGAAACCACT 2280
TACAGCAAAA AAAAGATTGT TGATTTCTTG TCTGCTCTGG AAGGATTCAA AGTGATGTGC 2340
AAGATTGTTG GAATTATGGA AGAAGTAGTA GGTAATTTCA AGTCTAAAAT CCTTAAGCAA 2400
GTTATTACAC TCCGGACTCA AAATTCGGGG GGTCGTTTCC CTGAGTTGAC CACAGAATTG 2460
AATCGATGGG ATACAGCCTT TGACCATGAA AAAGCTCGAA AGACTGGAAT TATTACTCCT 2520
AAAACAGGAT TTGATTCTGA TTATGACCAA GCATTGGTTG ATATTAAGGA CAATGAGCAG 2580
AGCCTTTTAG ACTATTTAGA GAAACAGCGT AAACGGATTG GCTGCAGGTC CATAGTCTAT 2640
TGGGGTGTTG GCAAAAATCG TTACCAATTG GAAATTCCAG AAAGTTTCAC ATTGCATGAT 2700
TTGCCAGGGG AATATGAACT AAAGTCCACC AAGAAGGGCT GTAAACGATA CTGGACAAAG 2760
GACATTGAGA AGAAGCTTGC TGATTTGATG AATGCTGAAG AGCGGAGAGA TGTATCACTG 2820
AAGGATTGTA TGAGGAGACT CTTCTTTAAT TTTGATAAAA ATTACAGGGA CTGGCAGACT 2880
GCTGTGGAGT GCATTGCAGT GTTCGATGTC TTACTATGCT TGGCCAACTA TAGTCGAGGT 2940
GGTGAAGGTC CCATGTGTCG TCCAGTAATC CTAGTACCAG ACGAGGAGAC TCGACCCTTT 3000
TTAAAGCTTA AAGGATCCCG ACATCCATGT GTTACAAATA ACTTTTTTGG TGATGATTTT 3060
ATTCCTAATG ACATTATGAT AGGCTGTAAG GAAGAAGATT CGGAAGATAG TACCTGGGAT 3120
GCTTATTGTG TGCTGGTTAC TGGACCAAAT ATGGGGGGCA AATCAACCCT CATGAGACAG 3180
GCTGGTCTTT TGCTTATAAT GGCTCAGATG GGCTGTTATG TTCCTGCTGA AGTTTGTAGT 3240
TTCACACCAG TTGATAGAGT GTTCACTAGA TTAGGTGCTT CAGACAGAAT AATGTCAGGT 3300
GAAAGTACCT TTTTTGTTGA AATGAATGAG ACTGCCAGCA TACTACAGCA TGCAACAGAA 3360
CATTCCTTGG TGCTCATGGA TGAACTAGGT AGAGGCACTG CAACTTTTGA TGGTACAGCT 3420
ATAGCAAATG CAGTTGTTAA AGAACTTGCC GAGACCATAA AGTGTCGTAC TTTATTTTCT 3480
ACACACTACC ATTCATTAGT AGAGGATTAC TCCCAAAATG TTGCTGTGTG CCTAGGACAC 3540
ATGGCATGCA TGGTTGAAAA TGAATGTGAA GACCCAAGCC AGGAAACCAT TACCTTCCTC 3600
TATAAATTTA CTAAAGGTGC TTGTCCTAAA AGCTATGGCT TCAATGCAGC AAGGCTTGCC 3660
TGTCTTCCTG AAGAGATTAT TCAGAAAGGC CATAGGAAAG CAAAAGAATT TGAGAAGATG 3720
ACCCAATCAT TGAGACTATT TCGGGAAGTT TGTTTGGCTC TTGAAAATTC AGCTGCAGAT 3780
GTCCAGGCTA TTCACAAGTT GTTGACTTTG ATCAAGGAAA TATAA 3826
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 94 0.0 2367
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 80 0.0 2073
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 81 0.0 2061
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 80 0.0 2058
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 81 0.0 2057
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 80 0.0 2056
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 80 0.0 2054
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 80 0.0 2051
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 80 0.0 2051
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 81 0.0 2050
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 80 0.0 2047
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 80 0.0 2046
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 80 0.0 2045
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 80 0.0 2044
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 80 0.0 2040
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 80 0.0 2036
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 79 0.0 2032
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 80 0.0 2031
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 80 0.0 2031
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 80 0.0 2024
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 80 0.0 2011
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 80 0.0 2008
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 80 0.0 2006
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 78 0.0 1993
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 77 0.0 1987
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 78 0.0 1984
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 76 0.0 1980
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 79 0.0 1867
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 71 0.0 1822
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 69 0.0 1790
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 70 0.0 1783
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 69 0.0 1777
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 67 0.0 1754
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 68 0.0 1753
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 70 0.0 1750
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 65 0.0 1636
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 63 0.0 1633
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 63 0.0 1607
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 62 0.0 1590
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 61 0.0 1576
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 62 0.0 1574
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 61 0.0 1563
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 62 0.0 1538
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 60 0.0 1536
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 61 0.0 1513
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 81 0.0 1462
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 61 0.0 1452
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 56 0.0 1418
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 75 0.0 1412
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 77 0.0 1230
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 81 0.0 1145
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 46 0.0 1106
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 82 0.0 943
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 84 0.0 875
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 82 0.0 754
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 82 0.0 721
WERAM-Met-0160 AES82183 Medicago truncatula 40 0.0 675
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 84 7e-159 559
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 84 7e-152 536
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 75 7e-151 532
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 48 6e-21 101
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 34 1e-11 70.5
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 47 3e-11 68.9
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 43 3e-11 68.9
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 46 7e-11 67.8
Created Date 25-Jun-2016