WERAM Information

Tag Content
WERAM ID WERAM-Prc-0145
Ensembl Protein ID ENSPCAP00000013528.1
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPCAG00000014474.1 ENSPCAT00000014478.1 ENSPCAP00000013528.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 6.50e-23 80.3 89 150
Organism Procavia capensis
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ + +V+FF+++++r wv+++ l+py++
  ENSPCAP00000013528.1  89 PGDLVWAKMEGYPWWPCLVYNHPFDGTFV-REKGKSVRIHVQFFDDSPTRGWVSKRLLKPYTG 150
                           69***************************.*******************************86 PP
Protein Sequence
(Fasta)		MSRQSTLYTF FPKSPALNNA NKAPARPSSG GSTAAATVAS PSPSGDAAWS EAGPGSLASS 60
ASPSEAKKLN GGLRRQAAPA VPASCDFSPG DLVWAKMEGY PWWPCLVYNH PFDGTFVREK 120
GKSVRIHVQF FDDSPTRGWV SKRLLKPYTG SKAKEAQKGG HFYSSKPEIL RAMQSADEAL 180
NKDKLKRLEL AVCDEPSEPE EEEEMEVDAT NTLEKREEPA ETESEEEVRP KIQGARRSGR 240
QIKKRRVISD SESDAGGSDV EFKPDAKEEA SSDEMSSGVG DSEGEGLYSP ARVAPKRKKT 300
VTGNSSLKRK NSRKEMSSAT KKATGIPSET KSTLSAFSAP QNSESQPHIS GSSDDGSRST 360
VWYHETLEWL KEEKRRDERR RRPDHPDFDA STLYVPEDFL NSCTPGMRKW WQIKSQNFDL 420
VIFYKVGKFY ELYHMDALVG VSELGLVFMK GNWAHSGFPE IAFGRYSDSL VQKGYKVARV 480
EQTETPEMME ARCRKMAHIS KHDRVVRREI CRVITRGTQT YSVLEGDPSE NHCKYLLSLK 540
EKEDDCYGHT RVYGVCFVDT SLGRFYVGQF SDDRHCSRFR TLVAHYPPVQ VLFEKSNLST 600
ETKTILRSSL SSSLQEGLIP GSQFWDAAKT LRVLLEDGYF TEKLNEDSGV RLPQVLKGMT 660
SESDSIGLTP GEKSELALSA LGGCVFYLKK CLIDQELLSM ANFEEYIPLD SDMVGATKPG 720
AVFAKASQRM VLDAVTLNNL EIFLNGTNGS TEGTLLERID TCHTPFGKRL LKQWLCAPLC 780
SPFPINDRLD AIEDLMAVPD KISELVDLLK RLPDLERLLS KIHNVGSPLK SQNHRDSRAI 840
MYEETTYSKK KIIDFLSALE GFKVMCKIIE VMEEVVSDFK SKLLKQVITL QAKNPEGRFP 900
DLTAELNRWD TAFDHEKARK TGLITPKAGF DADYDQALAD IRENEQSLLE YLEKQRNRIG 960
CRTIVYWGIG RNRYQLEIPE NFTTRNLPEE YELKSTKKGC KRYWTKTIEK KLANLINAEE 1020
RRDVSLKDCM RRLFYNFDKN YKDWQAAVEC IAVLDVLLCL ATYSQGGDGP MCRPVVLLPT 1080
EDTPPFLELQ GSRHPCITKT FFGDDFIPND ILIGCEEEEE RGKAYCVLVT GPNMGGKSTL 1140
MRQAGLLAVM AQVGCYVPAE VCRLTPIDRV FTRLGASDRI MSGESTFFVE LSETASILTH 1200
ATAHSLVLVD ELGRGTATFD GTAIASAVVK ELAENIKCRT LFSTHYHSLV ENYSQNVAVR 1260
LGHMACMVEN ECEDPSQETI TFLYKFIKGA CPKSYGFNAA RLANLPEEVI QKGHRKAREF 1320
EMTTKSLRLF REVCLASERS TLEAEAVHKL LTLIKDL 1357
Nucleotide Sequence
(Fasta)		ATGTCGCGAC AGAGCACCCT GTACACCTTC TTCCCCAAGT CTCCTGCGCT GAATAATGCC 60
AACAAAGCCC CAGCCAGGCC CTCAAGTGGA GGCAGCACTG CCGCCGCCAC TGTGGCCTCT 120
CCTTCCCCCA GCGGGGATGC GGCCTGGAGC GAGGCCGGGC CTGGGTCCCT GGCGAGCTCT 180
GCGTCGCCCT CTGAGGCGAA GAAGCTCAAC GGAGGCCTGC GGAGGCAGGC GGCGCCTGCA 240
GTCCCCGCCA GCTGTGACTT CTCGCCAGGT GACCTGGTCT GGGCCAAGAT GGAGGGCTAC 300
CCCTGGTGGC CCTGCTTGGT CTACAACCAC CCCTTTGATG GGACCTTCGT CCGGGAGAAA 360
GGGAAGTCTG TCCGCATTCA CGTGCAGTTC TTTGATGACA GCCCCACCAG GGGCTGGGTC 420
AGCAAAAGGC TGTTAAAGCC GTACACAGGT TCAAAAGCAA AGGAAGCCCA GAAGGGAGGT 480
CATTTTTACA GTTCAAAGCC TGAAATACTC CGAGCAATGC AAAGTGCAGA TGAAGCCTTA 540
AATAAAGACA AGCTGAAGAG GCTTGAATTG GCAGTGTGTG ACGAGCCCTC AGAGCCAGAA 600
GAGGAAGAAG AGATGGAGGT AGATGCAACG AACACCTTAG AGAAGCGTGA AGAACCTGCT 660
GAAACAGAAA GTGAAGAGGA AGTGCGGCCT AAGATACAAG GGGCTCGGCG TAGTGGCCGT 720
CAGATAAAAA AACGTAGAGT CATATCAGAC TCAGAGAGTG ATGCTGGTGG TTCTGATGTG 780
GAGTTCAAGC CAGATGCCAA GGAGGAGGCC AGCAGCGATG AAATGAGCAG TGGTGTTGGG 840
GACAGTGAGG GAGAAGGCCT CTACAGCCCC GCCAGGGTTG CCCCAAAGCG GAAGAAAACG 900
GTGACTGGAA ACAGCTCTCT TAAAAGGAAG AATTCAAGGA AGGAAATGTC TTCAGCTACT 960
AAAAAAGCAA CTGGCATTCC ATCAGAAACA AAGAGTACTT TGAGTGCTTT CTCCGCCCCT 1020
CAGAATTCTG AGTCCCAGCC CCACATTAGT GGGAGCAGTG ATGATGGAAG TCGTTCCACT 1080
GTGTGGTATC ATGAAACCTT GGAATGGCTT AAGGAGGAGA AGAGAAGAGA TGAACGCAGG 1140
AGGCGGCCTG ATCACCCTGA TTTTGATGCG TCCACACTCT ACGTGCCGGA AGACTTCCTT 1200
AATTCTTGCA CTCCTGGGAT GAGGAAGTGG TGGCAGATTA AGTCTCAGAA TTTTGATCTT 1260
GTCATCTTTT ACAAGGTGGG CAAGTTTTAT GAGTTGTATC ACATGGATGC ACTTGTGGGA 1320
GTCAGTGAAC TGGGCCTGGT GTTTATGAAA GGCAACTGGG CCCACTCTGG TTTCCCCGAG 1380
ATCGCCTTCG GCCGCTACTC AGACTCTCTG GTGCAGAAGG GCTATAAGGT GGCACGGGTG 1440
GAGCAGACGG AGACCCCTGA GATGATGGAG GCGCGGTGCC GGAAGATGGC CCACATCTCG 1500
AAGCATGATC GGGTGGTGAG GCGGGAGATC TGCAGGGTCA TCACCAGAGG CACCCAGACC 1560
TACAGTGTTC TAGAAGGTGA CCCCTCGGAG AACCACTGCA AGTATCTTCT GAGCCTCAAA 1620
GAAAAAGAGG ACGATTGTTA TGGCCACACA CGGGTGTACG GTGTGTGCTT TGTCGACACG 1680
TCCCTGGGAA GGTTTTATGT GGGCCAGTTT TCTGATGATC GCCATTGCTC CCGGTTCAGG 1740
ACTCTGGTGG CACACTATCC CCCGGTACAA GTCCTGTTTG AGAAAAGTAA TCTCTCCACA 1800
GAAACCAAGA CGATTCTGAG GAGTTCACTA TCCTCTTCTC TTCAGGAAGG GCTTATACCA 1860
GGCTCCCAGT TCTGGGATGC AGCCAAAACT TTGCGCGTTC TCCTTGAAGA TGGGTATTTT 1920
ACAGAAAAGC TAAATGAGGA CAGTGGGGTG CGGCTACCCC AGGTGCTTAA AGGCATGACC 1980
TCCGAGTCAG ATTCCATTGG GCTGACTCCA GGAGAGAAGA GTGAGCTGGC ACTGTCTGCT 2040
CTGGGCGGCT GTGTTTTCTA CCTCAAAAAA TGCCTTATCG ACCAGGAGCT TTTATCAATG 2100
GCTAATTTTG AAGAATATAT TCCCTTGGAT TCTGATATGG TTGGTGCCAC CAAGCCTGGT 2160
GCTGTCTTTG CTAAAGCCAG TCAGCGAATG GTGCTAGATG CAGTGACATT AAACAACTTG 2220
GAGATTTTTC TCAACGGGAC AAATGGTTCT ACTGAAGGGA CTCTGCTAGA GAGAATTGAC 2280
ACTTGCCATA CTCCCTTTGG GAAGCGGCTT CTAAAGCAGT GGCTTTGTGC CCCACTCTGC 2340
AGCCCTTTCC CTATCAATGA TCGACTAGAT GCCATAGAAG ACCTCATGGC TGTGCCTGAC 2400
AAAATCTCTG AGCTGGTGGA CCTGTTAAAG AGGCTTCCAG ACCTTGAGAG GCTGCTGAGC 2460
AAAATACACA ATGTTGGGTC TCCCCTCAAG AGCCAGAACC ACCGTGATAG CAGGGCCATC 2520
ATGTATGAAG AAACTACGTA TAGCAAAAAA AAGATTATTG ATTTTCTTTC TGCTCTGGAA 2580
GGATTCAAAG TAATGTGTAA AATTATAGAG GTAATGGAAG AGGTTGTCAG TGACTTCAAG 2640
TCTAAGCTCC TTAAGCAGGT CATTACTCTC CAGGCAAAAA ATCCTGAAGG TCGCTTTCCT 2700
GATTTGACTG CAGAACTGAA CCGGTGGGAT ACAGCCTTTG ATCATGAGAA GGCTCGTAAG 2760
ACTGGACTTA TTACTCCGAA AGCAGGATTT GATGCAGATT ATGACCAGGC TCTTGCTGAC 2820
ATAAGAGAAA ATGAACAGAG CCTCCTGGAG TATTTGGAGA AACAGCGCAA TCGAATTGGC 2880
TGCAGGACCA TAGTCTACTG GGGGATTGGT AGGAATCGGT ATCAGCTGGA GATTCCAGAG 2940
AACTTCACCA CCCGCAACTT GCCTGAAGAG TACGAGCTGA AGTCTACCAA GAAGGGCTGT 3000
AAACGGTACT GGACCAAAAC AATTGAGAAG AAGTTGGCTA ATCTGATCAA CGCTGAGGAG 3060
CGGAGAGATG TGTCACTGAA GGATTGCATG CGGCGACTCT TTTATAACTT TGATAAAAAC 3120
TACAAGGACT GGCAGGCTGC TGTTGAGTGC ATTGCAGTGC TGGATGTCTT GCTGTGTCTG 3180
GCTACCTACA GTCAAGGAGG TGACGGTCCC ATGTGCCGCC CAGTGGTTCT GTTGCCGACA 3240
GAGGACACTC CCCCCTTCTT AGAGCTTCAA GGGTCACGCC ATCCCTGCAT TACCAAGACC 3300
TTTTTTGGAG ATGACTTTAT TCCTAATGAC ATCCTAATAG GCTGTGAGGA AGAGGAGGAA 3360
AGGGGCAAAG CTTATTGTGT GCTTGTCACT GGACCTAATA TGGGGGGCAA ATCGACGCTC 3420
ATGAGGCAGG CTGGCCTGTT GGCAGTAATG GCCCAGGTGG GCTGCTACGT ACCTGCTGAA 3480
GTGTGTAGGC TCACCCCCAT CGACCGAGTG TTCACGAGGC TCGGTGCCTC AGACAGAATC 3540
ATGTCAGGGG AAAGCACATT TTTTGTTGAG TTGAGTGAAA CTGCCAGCAT ACTCACACAT 3600
GCCACGGCTC ATTCCCTGGT GCTGGTGGAT GAATTAGGAA GAGGGACGGC AACATTTGAT 3660
GGGACAGCAA TAGCAAGTGC AGTTGTTAAA GAACTTGCTG AGAACATCAA ATGTCGTACG 3720
TTGTTCTCAA CACACTACCA TTCCTTAGTA GAAAATTACT CTCAGAACGT TGCCGTGCGC 3780
CTAGGACACA TGGCCTGCAT GGTAGAAAAT GAGTGTGAAG ACCCCAGCCA GGAGACGATC 3840
ACCTTCCTGT ATAAATTCAT TAAGGGTGCT TGTCCCAAAA GCTACGGCTT TAATGCAGCA 3900
AGGCTTGCCA ATCTCCCGGA GGAAGTTATT CAGAAGGGAC ACAGAAAAGC AAGAGAATTT 3960
GAGATGACGA CCAAGTCGCT GCGGCTATTT CGGGAAGTTT GCCTGGCTAG TGAAAGGTCA 4020
ACCCTAGAGG CTGAAGCTGT CCATAAGTTG CTGACTTTGA TTAAGGATTT ATAG 4075
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 89 0.0 2380
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 93 0.0 2367
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 90 0.0 2360
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 89 0.0 2358
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 89 0.0 2356
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 88 0.0 2356
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 89 0.0 2355
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 89 0.0 2353
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 88 0.0 2340
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 89 0.0 2334
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 88 0.0 2332
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 88 0.0 2329
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 89 0.0 2328
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 88 0.0 2325
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 88 0.0 2323
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 90 0.0 2321
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 88 0.0 2320
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 88 0.0 2313
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 91 0.0 2305
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 88 0.0 2300
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 91 0.0 2274
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 86 0.0 2261
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 86 0.0 2255
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 82 0.0 2219
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 82 0.0 2198
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 89 0.0 2182
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 78 0.0 2027
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 78 0.0 2012
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 70 0.0 1801
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 69 0.0 1774
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 70 0.0 1772
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 69 0.0 1753
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 64 0.0 1748
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 70 0.0 1741
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 64 0.0 1732
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 64 0.0 1641
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 82 0.0 1639
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 63 0.0 1621
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 60 0.0 1588
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 63 0.0 1588
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 88 0.0 1580
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 60 0.0 1566
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 62 0.0 1562
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 59 0.0 1557
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 63 0.0 1555
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 62 0.0 1546
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 61 0.0 1508
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 61 0.0 1433
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 58 0.0 1416
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 87 0.0 1407
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 90 0.0 1263
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 47 0.0 1090
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 88 0.0 1002
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 94 0.0 952
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 90 0.0 827
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 90 0.0 805
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 77 0.0 741
WERAM-Met-0160 AES82183 Medicago truncatula 41 0.0 672
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 93 3e-178 624
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 93 2e-165 581
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 60 6e-23 107
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 4e-12 72.0
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 8e-12 70.9
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 31 9e-12 70.9
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 30 8e-11 67.8
Created Date 25-Jun-2016