WERAM Information

Tag Content
WERAM ID WERAM-Dio-0122
Ensembl Protein ID ENSDORP00000011809.1
Gene Name Msh6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDORG00000012561.1 ENSDORT00000012559.1 ENSDORP00000011809.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 3.90e-23 81 90 151
Organism Dipodomys ordii
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ +++V+FF+++++r wv+++ l+py++
  ENSDORP00000011809.1  90 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKSARVHVQFFDDSPTRGWVSKRLLKPYTG 151
                           69***************************.*******************************86 PP
Protein Sequence
(Fasta)		MSRQSTLYSF FPKSPALNNA KKAGASSEGR RAAAARASPA LSGDAAGSEA GPEPGPQAVE 60
SSPPEAKNLN GRLRSSAAPA APASSCDFSP GDLVWAKMEG YPWWPCLVYN HPFDGTFIRE 120
KGKSARVHVQ FFDDSPTRGW VSKRLLKPYT GSKSQEAQKG GHFYSSKSEI LRAMQRADEA 180
LNKDKIKRLE MAVCDEPSES EEEEETEVGA TYASDNSEEK DSEAEMQPQK QGPRRSSRQV 240
KKLRVISDSE SDGDSDVEFK PNTKEXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 300
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 360
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 420
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 480
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 540
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 600
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 660
XXXXXXXXXX XELALSALGG CVFYLKKCCI DHELLSMANF EEYIPLDSNM VSTTKPGAIF 720
TKANQRMVLD AVTLNNLEIF LNGTNGSTEG TLIERIDTCH TLFGKRLLKQ WLCAPLCNPF 780
AISDRLDAIE DLMVLPDKTS EVAELLKKLP DLERLLSKIH NVGFPLKNHN HPDSRAIMYE 840
ETTYSKKKII DFLSTLEGFK VMCKIIEIMG EVTEGFKSKI LKQIVTLQAK SPEGRFPDLT 900
AELNRWDTAF DHEKARKTGL IIPKAGFDAD YDQALADIRE NEQSLLEYLE KQRTRMGCRS 960
IVYWGIGRNR YQLEIPENFT TRNLPEEYEL KSTKKGCKRY WTKTIEKKLA NLINAEERRD 1020
TSLKDCMRRL FYNFDKNYND WQSAVECIAX XXVLLCLANY SQGGDGPMCR PVILLPGEDT 1080
LPFLELKGSR HPCITKTFFG DDFIPNDILI GCEEEEENSK AFCVLVTGPN MGGKSTLIRQ 1140
AGLLAVLAQL GCYVPAEVCR LTPVDRVFTR LGASDRIMSG ESTFFVELSE TASILTHATA 1200
HSLVLVDELG RGTATFDGTA IANAVVKELA ETIKCRTLFS THYHSLVEDY SKNVSVRLGH 1260
MACMVENESE DPSQETITFL YKFIKGACPK SYGFNAAKLA NLPEEVIQKG HRKAREFEKM 1320
NQSLRLFREV CLVSERSTID AEAVHKLLTL IKEL 1354
Nucleotide Sequence
(Fasta)		ATGTCGCGAC AGAGCACCCT GTATAGCTTC TTCCCCAAGT CTCCGGCGCT GAATAATGCC 60
AAGAAGGCCG GGGCCTCTAG CGAAGGTCGC CGCGCCGCCG CCGCTAGGGC CTCCCCTGCC 120
CTCAGCGGGG ATGCGGCCGG GAGCGAGGCT GGGCCTGAGC CCGGGCCACA GGCAGTCGAG 180
TCGTCGCCGC CGGAAGCAAA GAATCTCAAT GGAAGGCTGC GGAGCTCGGC TGCACCTGCA 240
GCCCCGGCCA GTTCCTGTGA CTTCTCACCA GGTGATTTAG TTTGGGCCAA GATGGAGGGT 300
TACCCCTGGT GGCCTTGCCT GGTTTACAAT CATCCCTTTG ATGGAACATT CATCCGGGAG 360
AAAGGGAAAT CAGCCCGTGT TCATGTGCAG TTTTTTGATG ACAGCCCAAC AAGGGGCTGG 420
GTCAGCAAAA GGCTATTAAA GCCATATACA GGTTCAAAAT CACAGGAAGC CCAAAAGGGT 480
GGCCATTTTT ATAGTTCAAA GTCTGAAATA CTCAGAGCAA TGCAACGAGC AGATGAAGCC 540
TTAAATAAAG ACAAGATTAA GAGGCTTGAA ATGGCAGTGT GTGATGAACC CTCAGAGTCA 600
GAAGAAGAGG AAGAGACAGA GGTAGGTGCA ACTTATGCAT CAGATAACAG TGAAGAAAAG 660
GACAGTGAAG CTGAAATGCA GCCTCAGAAA CAAGGACCTA GGAGAAGTAG CCGGCAAGTA 720
AAAAAACTAA GGGTCATATC AGACTCAGAG AGTGATGGTG ACTCTGATGT GGAATTCAAG 780
CCCAATACTA AGGAGNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 840
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 900
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 960
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1020
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1080
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1140
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1200
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1260
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1320
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1380
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1440
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1500
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1560
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1620
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1680
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1740
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1800
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1860
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1920
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1980
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNTGAATTGG CCCTCTCTGC TCTAGGTGGC 2040
TGTGTCTTCT ACCTCAAAAA ATGCTGTATT GATCACGAAC TTTTATCCAT GGCTAACTTT 2100
GAAGAGTATA TTCCTTTGGA TTCCAACATG GTTAGTACTA CAAAACCAGG TGCTATTTTT 2160
ACTAAAGCCA ATCAACGTAT GGTGCTAGAT GCAGTGACAT TAAACAACTT GGAGATTTTC 2220
CTGAATGGGA CGAATGGTTC TACTGAGGGG ACCCTGATAG AAAGGATCGA TACCTGCCAT 2280
ACTCTCTTTG GAAAGCGGCT TCTGAAACAG TGGCTTTGTG CCCCACTCTG TAACCCTTTT 2340
GCCATCAGTG ATCGCCTAGA TGCCATAGAA GACCTCATGG TACTCCCTGA CAAAACCTCT 2400
GAAGTTGCAG AACTTCTAAA AAAGCTTCCA GATCTTGAGA GGCTCCTGAG TAAAATTCAT 2460
AATGTTGGGT TTCCCTTAAA AAACCACAAC CACCCAGATA GCAGGGCTAT AATGTATGAA 2520
GAAACCACAT ATAGTAAAAA AAAGATAATT GATTTTCTTT CTACTCTGGA AGGATTCAAA 2580
GTAATGTGTA AAATTATAGA GATTATGGGA GAAGTAACTG AAGGTTTTAA GTCCAAAATC 2640
CTTAAGCAGA TAGTGACTCT ACAGGCAAAA AGTCCCGAAG GTCGTTTTCC TGACTTGACT 2700
GCAGAACTGA ACCGATGGGA TACAGCCTTT GACCATGAAA AGGCTAGAAA GACTGGATTG 2760
ATCATTCCCA AAGCAGGATT TGACGCTGAT TATGACCAAG CACTGGCCGA CATAAGAGAA 2820
AATGAACAGA GCCTCCTGGA GTACTTAGAG AAACAGCGCA CTCGAATGGG CTGTAGGAGC 2880
ATTGTTTATT GGGGGATTGG TAGGAACCGT TACCAGTTGG AAATTCCAGA GAATTTCACT 2940
ACTCGTAATC TGCCAGAAGA GTATGAATTG AAATCTACCA AGAAAGGTTG TAAACGATAC 3000
TGGACCAAAA CTATTGAGAA AAAGTTGGCT AATCTGATAA ATGCTGAAGA ACGTAGAGAC 3060
ACATCGCTAA AGGACTGTAT GCGGCGACTA TTTTATAACT TCGATAAAAA TTATAACGAC 3120
TGGCAGTCTG CTGTAGAATG CATTGCAGNN NNNNATGTTT TACTGTGCCT AGCTAACTAT 3180
AGTCAAGGGG GTGATGGTCC TATGTGTCGC CCAGTAATTC TGTTACCAGG AGAAGACACT 3240
CTCCCATTCT TAGAGCTTAA AGGATCACGA CATCCCTGCA TTACGAAGAC ATTTTTTGGA 3300
GATGATTTTA TTCCTAATGA TATTCTAATA GGCTGTGAGG AAGAGGAGGA AAATAGCAAA 3360
GCCTTTTGTG TGCTTGTTAC TGGACCGAAT ATGGGAGGGA AGTCCACACT TATAAGACAG 3420
GCTGGTCTGT TAGCTGTACT GGCTCAGTTG GGTTGTTATG TACCTGCTGA AGTATGTAGG 3480
CTCACACCAG TTGATCGGGT GTTTACTAGA CTTGGTGCCT CAGATAGAAT AATGTCAGGT 3540
GAAAGTACAT TTTTTGTTGA ATTGAGTGAA ACTGCCAGCA TTCTTACGCA TGCAACAGCA 3600
CATTCTCTTG TGCTTGTGGA TGAATTAGGA AGAGGCACTG CAACCTTTGA TGGGACAGCA 3660
ATAGCAAACG CAGTTGTTAA AGAACTTGCT GAGACCATAA AGTGTCGTAC ATTGTTTTCT 3720
ACCCATTACC ATTCATTAGT AGAAGATTAT TCTAAAAATG TTTCTGTGCG CCTAGGACAT 3780
ATGGCATGCA TGGTAGAAAA CGAAAGTGAA GATCCCAGCC AGGAGACCAT TACTTTCCTG 3840
TATAAGTTCA TTAAAGGAGC TTGTCCTAAG AGCTATGGCT TTAATGCAGC AAAACTTGCA 3900
AATCTCCCAG AGGAAGTTAT TCAGAAGGGA CATAGAAAAG CAAGAGAATT TGAGAAGATG 3960
AATCAATCAC TACGGTTATT TCGGGAAGTT TGCCTGGTTA GTGAAAGGTC AACTATAGAT 4020
GCTGAAGCTG TCCATAAGTT GCTGACTTTG ATTAAGGAAT TATAG 4066
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 92 0.0 1256
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 92 0.0 1256
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 92 0.0 1255
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 92 0.0 1254
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 91 0.0 1253
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 92 0.0 1253
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 92 0.0 1253
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 92 0.0 1250
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 91 0.0 1238
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 90 0.0 1238
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 89 0.0 1236
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 90 0.0 1235
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 89 0.0 1233
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 90 0.0 1230
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 90 0.0 1229
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 90 0.0 1229
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 90 0.0 1229
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 89 0.0 1227
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 89 0.0 1226
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 89 0.0 1221
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 88 0.0 1220
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 90 0.0 1218
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 89 0.0 1217
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 88 0.0 1212
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 88 0.0 1198
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 87 0.0 1191
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 90 0.0 1187
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 81 0.0 1125
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 81 0.0 1122
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 89 0.0 1054
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 76 0.0 1052
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 74 0.0 1027
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 74 0.0 1023
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 73 0.0 1019
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 72 0.0 1006
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 75 0.0 1001
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 75 0.0 999
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 71 0.0 978
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 69 0.0 952
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 69 0.0 949
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 69 0.0 944
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 70 0.0 942
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 68 0.0 935
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 68 0.0 932
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 67 0.0 928
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 67 0.0 915
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 67 0.0 910
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 88 0.0 897
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 68 0.0 820
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 61 0.0 808
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 87 0.0 682
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 52 0.0 661
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 87 0.0 655
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 89 0.0 652
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 89 2e-168 591
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 91 7e-155 546
WERAM-Met-0160 AES82183 Medicago truncatula 41 1e-129 462
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 85 2e-115 415
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 80 2e-114 411
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 95 3e-111 401
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 62 7e-24 110
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 48 1e-12 73.6
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 35 7e-12 71.2
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 42 1e-11 70.5
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 34 1e-11 70.1
WERAM-Sei-0090 Si024584m Setaria italica 38 3e-07 55.8
Created Date 25-Jun-2016