WERAM Information

Tag Content
WERAM ID WERAM-Mim-0103
Ensembl Protein ID ENSMICP00000009629.1
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSMICG00000010574.1 ENSMICT00000010573.1 ENSMICP00000009629.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 5.10e-23 80.7 6 66
Organism Microcebus murinus
Domain Profile
  Me_Reader PWWP
              PWWP.txt  1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpys 62
                          +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ +++V+FF+++++r wv+++ l+py+
  ENSMICP00000009629.1  6 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYT 66
                          69***************************.*******************************8 PP
Protein Sequence
(Fasta)		SCDFSPGDLV WAKMEGYPWW PCLVYNHPFD GTFIREKGKS VRVHVQFFDD SPTRGWVSKR 60
LLKPYTXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 120
XXXVGTTYVS DKSEEDNEVE SDEEVQPKTQ GSRRSSRQIK KRRVISDSES DIGGSDVEFK 180
PDTKEEGSSD EISSGVGDSE NEGFDSPVKV ARKRKKMAGY GSLKRKSSRK EMPSATKRAT 240
GISSETKSTL NAFSASQNSE SQAHISGGGD DSGRPTIWYH ETLEWLKKEK RRDEHRRRPD 300
HPDFDASTLY VPEDFLNSCT PGMRKWWQIK SQNFDLVIFY KVGKFYELYH MDALIGVNEL 360
GLVFMKGNWA HSGFPEIAFG RYSDSLVQKG YKVARVEQTE TPEMMEARCR KMAHISKHDR 420
VVRREICRII TKGTQTYSVL EGDPSENYSK YLLSLKEKED SSGHTRVYGV CFVDTSLGKF 480
FIGQFSDDRH CSRXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 540
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 600
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 660
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 720
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 780
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXFDH EKARKTGLIT 840
PKAGFDSDYD QALADIRENE QSLLEYLEKQ RSRIGCRTIV YWGIGRNRYQ LEIPENFTTR 900
NLPEEYELKS TKKGCKRYWT KTIEKKLANL INAEERRDVS LKDCMRRLFY NFDKNYKDWQ 960
TAVECMAVLX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 1020
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXAG LLAIMAQMGC YVPAEVCRLT 1080
PIDRVFTRLG ASDRIMSGES TFFVELSETA SILMHATAHS LVLVDELGRG TATFDGTAIA 1140
NAVVKELAEA IKCRTLFSTH YHSLVEDYSQ NVAVRLGHMA CMVENECEDP SQETITFLYK 1200
FIKGACPKSY GFNAARLANL PDEVIQKGHR KAREFEKMNQ SLRLFREVCL ASERSTVDAE 1260
AVHKLLTLIK EL 1272
Nucleotide Sequence
(Fasta)		TCTTGTGACT TCTCACCAGG TGATTTGGTT TGGGCCAAGA TGGAGGGTTA CCCTTGGTGG 60
CCTTGTCTGG TTTATAACCA CCCTTTTGAT GGAACATTCA TCCGAGAGAA AGGGAAATCA 120
GTACGCGTTC ATGTACAGTT TTTTGATGAC AGCCCAACGA GGGGCTGGGT TAGCAAAAGG 180
CTACTAAAAC CATATACAGN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 240
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 300
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 360
NNNNNNNNNG TAGGCACAAC TTATGTATCA GATAAGAGTG AAGAAGATAA TGAAGTAGAG 420
AGTGATGAAG AAGTACAGCC TAAGACGCAA GGATCTAGGC GAAGTAGCCG CCAAATAAAA 480
AAACGAAGGG TCATATCAGA CTCTGAGAGT GACATTGGTG GCTCTGATGT GGAATTCAAG 540
CCAGACACTA AGGAGGAAGG AAGCAGCGAT GAAATAAGCA GTGGAGTGGG GGATAGTGAG 600
AATGAAGGCT TTGACAGCCC TGTTAAAGTT GCCCGAAAGC GGAAGAAAAT GGCTGGATAT 660
GGCTCTCTTA AAAGGAAAAG TTCAAGGAAG GAAATGCCCT CAGCCACCAA AAGAGCAACT 720
GGCATTTCAT CAGAAACCAA GAGTACTTTG AATGCTTTCT CTGCCTCTCA AAATTCTGAA 780
TCTCAAGCCC ACATTAGTGG AGGAGGTGAT GACAGTGGTC GCCCCACTAT CTGGTATCAT 840
GAAACTTTAG AGTGGCTTAA GAAGGAGAAG AGAAGAGATG AGCACAGGAG GCGGCCTGAT 900
CACCCTGATT TTGATGCATC TACACTCTAT GTGCCTGAGG ATTTTCTTAA TTCCTGTACT 960
CCTGGAATGA GGAAGTGGTG GCAGATTAAG TCTCAGAACT TTGATCTAGT CATCTTTTAT 1020
AAGGTGGGGA AGTTTTATGA ACTATACCAC ATGGATGCTC TCATTGGGGT CAATGAACTG 1080
GGGCTTGTAT TTATGAAGGG CAACTGGGCA CATTCTGGTT TTCCTGAAAT TGCATTTGGC 1140
CGTTATTCAG ATTCCCTGGT GCAAAAGGGC TATAAAGTAG CACGAGTGGA ACAGACTGAG 1200
ACCCCGGAAA TGATGGAGGC ACGATGCCGA AAGATGGCAC ATATATCCAA ACATGATAGA 1260
GTGGTGAGGA GGGAGATTTG TAGGATCATT ACCAAGGGTA CACAGACCTA CAGTGTGCTG 1320
GAGGGTGATC CCTCTGAGAA CTACAGTAAA TATCTTCTTA GCCTTAAAGA AAAAGAAGAT 1380
TCTTCTGGCC ACACTCGTGT ATATGGTGTA TGCTTTGTTG ATACTTCACT GGGAAAGTTT 1440
TTCATAGGTC AGTTTTCAGA TGATCGCCAC TGTTCCAGAN NNNNNNNNNN NNNNNNNNNN 1500
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1560
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1620
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1680
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1740
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1800
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1860
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1920
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1980
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2040
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2100
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2160
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2220
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2280
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2340
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2400
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2460
NNNNNNNNNN NNNNNNNNNN CTTTGACCAT GAAAAGGCTC GAAAGACTGG ACTGATTACT 2520
CCCAAAGCAG GATTTGATTC TGATTATGAC CAAGCTCTTG CTGACATAAG AGAAAATGAA 2580
CAGAGCCTCC TGGAATACCT AGAGAAACAG CGCAGTCGAA TTGGCTGTAG GACCATTGTC 2640
TACTGGGGCA TTGGTAGGAA CCGTTACCAG TTGGAAATTC CAGAGAATTT CACCACCCGT 2700
AATTTGCCAG AAGAGTATGA GTTGAAATCT ACCAAGAAGG GCTGTAAACG ATACTGGACC 2760
AAAACTATTG AGAAGAAGTT GGCTAACCTG ATAAATGCGG AAGAACGGAG AGATGTATCC 2820
TTGAAGGACT GCATGCGGCG ACTGTTCTAT AACTTCGACA AAAATTACAA GGACTGGCAG 2880
ACAGCTGTAG AATGCATGGC AGTACTGGNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2940
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3000
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3060
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3120
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNGCTGGC 3180
TTATTAGCTA TAATGGCCCA GATGGGTTGT TATGTACCTG CTGAAGTGTG TAGGCTCACA 3240
CCGATTGATA GAGTGTTTAC TAGACTTGGT GCTTCAGATA GAATAATGTC AGGTGAAAGT 3300
ACATTTTTTG TTGAATTGAG TGAAACTGCT AGCATACTTA TGCATGCAAC AGCACATTCT 3360
CTGGTGCTTG TGGATGAATT AGGAAGAGGT ACTGCTACGT TTGATGGGAC AGCAATAGCA 3420
AATGCAGTTG TTAAAGAACT TGCTGAGGCT ATAAAATGTC GTACATTATT TTCTACCCAC 3480
TACCATTCAT TGGTAGAAGA TTATTCTCAA AATGTTGCTG TGCGCCTGGG ACATATGGCA 3540
TGCATGGTGG AAAATGAATG TGAAGACCCC AGCCAGGAGA CTATTACCTT CCTCTACAAA 3600
TTCATTAAAG GAGCATGTCC TAAAAGCTAT GGCTTTAATG CAGCAAGGCT TGCTAATCTT 3660
CCAGACGAAG TTATTCAAAA GGGACACAGA AAAGCTAGAG AATTTGAGAA GATGAATCAG 3720
TCACTACGAT TATTTCGGGA AGTTTGCCTG GCTAGTGAAA GGTCAACTGT AGATGCTGAA 3780
GCTGTCCATA AGTTGCTGAC TTTGATTAAG GAATTATAG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 83 0.0 714
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 84 0.0 713
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 84 0.0 712
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 83 0.0 711
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 83 0.0 711
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 83 0.0 710
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 82 0.0 709
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 83 0.0 709
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 83 0.0 706
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 82 0.0 706
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 83 0.0 704
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 81 0.0 704
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 82 0.0 702
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 82 0.0 701
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 82 0.0 701
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 81 0.0 699
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 81 0.0 697
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 80 0.0 680
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 80 0.0 663
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 93 7e-165 579
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 92 3e-163 573
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 91 9e-160 562
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 90 9e-159 558
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 90 1e-157 555
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 90 8e-152 535
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 90 2e-150 531
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 87 9e-149 525
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 83 4e-144 510
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 83 6e-144 509
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 77 5e-132 470
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 77 2e-130 464
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 88 3e-120 431
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 94 9e-117 419
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 94 2e-116 418
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 93 4e-114 410
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 94 2e-113 408
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 66 4e-112 404
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 66 5e-112 403
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 66 8e-111 399
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 97 1e-110 399
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 66 7e-110 396
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 65 1e-108 392
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 66 4e-108 390
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 64 3e-106 384
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 88 5e-106 384
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 64 7e-104 376
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 67 7e-103 373
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 65 5e-102 370
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 67 5e-101 367
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 67 1e-100 366
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 64 5e-99 360
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 57 8e-97 353
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 64 1e-95 349
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 61 2e-94 345
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 62 3e-93 341
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 76 2e-91 335
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 54 2e-89 328
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 64 9e-70 263
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 99 5e-69 260
WERAM-Met-0160 AES82183 Medicago truncatula 55 1e-50 199
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 55 3e-17 89.0
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 1e-11 70.1
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 48 2e-11 69.7
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 41 2e-09 62.8
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 42 5e-09 61.6
Created Date 25-Jun-2016