WERAM Information

Tag Content
WERAM ID WERAM-Ict-0166
Ensembl Protein ID ENSSTOP00000016600.1
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSTOG00000022429.1 ENSSTOT00000028714.1 ENSSTOP00000016600.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 3.30e-23 81.6 94 155
Organism Ictidomys tridecemlineatus
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ +++V+FF+++++r wv+++ l+py++
  ENSSTOP00000016600.1  94 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTG 155
                           69***************************.*******************************86 PP
Protein Sequence
(Fasta)		MSRQSTLYSF FPKSPALNNA NKASTRASRE SGGAAAAATR ASPSPGGDVA RSEAGPGHRP 60
LGSSASPPEA KNLNGRLRRS AAPAVPASSC DFSPGDLVWA KMEGYPWWPC LVYNHPFDGT 120
FIREKGKSVR VHVQFFDDSP TRGWVSKRLL KPYTGSKSKE AQKGGHFYSS KPEILRAMQR 180
ADEALNKDKA ERLELAVCDE PSEPEEEEEM EVGATYASDK SEEDNEIESE EEVKPKMEGS 240
RRSSRQVKKR RVISDSESDI GGSDVEFKPD AKEEGSSDEI SSGVGDSESE GLDSPVKVAP 300
KRKRMVTGSS AFKRKSSRKE MPSTTKRAAG ILSETKNTLS AFSAPQNSDS QAHVSGGGDN 360
SSRPTTWYHE TLEWLKKEKR RDEHRRRPDH PDFDASTLYV PEDFLNSCTP GMRKWWQIKS 420
QNFDLVIFYK VGKFYELYHM DALIGVNELG LVFMKGNWAH SGFPEIAFGR YSDSLVQKGY 480
KVARVEQTET PEMMEARCRK MAHISKHDRV VKREICRIIT KGTQTYSVLE GDPSENYSKY 540
LLSLKEKEED SSGHTRMYGV CFVDTSLGKF FIGQFSDDRH CSRFRTLVAH YPPVQVLFEK 600
GNLSVETKTI LKSSLSSSLQ EGLTPGSQFW DAAKTLRTLL EEGYFTEKLN EDSGVMLPQV 660
LKDMTSESDS IGLTPGEKSE LALSALGGCV FYLKKCLIDQ ELLSMANFEE YIPLDSDMVN 720
TRSGAKFTKA NQRMVLDAVT LNNLEIFVNG TNGSTEGTLL ERIDTCHTIF GKRLLKQWLC 780
APLCSPFAIN DRLNAIEDLI VVPDKISEVT ELLKKLPDLE RLLSKIHNVG SPLKSQNHPD 840
SRAIMYEETT YSKKKIIDFL SALEGFKVMC KIIGIMEEVV DDFKSKILKQ VVTLQTKNPE 900
GCFPDLTSEL NRWDTAFDHE KARKTGLITP KAGFDSDYDQ ALADIRENEQ SLLEYLEKQR 960
NRIGCRTIVY WGIGRNRYQL EIPENFTTHN LPEEYELKST KKGCKRYWTK TIEKKLANLI 1020
NAEERRDISL KDCMRRLFYN FDKNYKDWQS AVECIAVLDV LICLANYSQG GDGPMCRPVI 1080
LLPGEDTLPF LELKGSRHPC ITKTFFGDDF IPNDILIGCE EEEKENGKAY CVLVTGPNMG 1140
GKSTLIRQAG LLAVMAQMGC YVPAEVCRLT PVDRVFTRLG ASDRIMSGES TFFVELSETA 1200
SILTHATAHS LVLMDELGRG TATFDGTAIA NAVVKELAET IKCRTLFSTH YHSLVEEYSK 1260
NVAVRLGHMA CMVENECEDP SQETITFLYK FIKGACPKSY GFNAARLANL PEEVIQKGHR 1320
KAREFERMNQ SLRLFREVCL ASERSTLDAE AVHKLLSLIK EL 1362
Nucleotide Sequence
(Fasta)		CTTTAAGCGA TCCGCCCGTA GAACGGTTGG GCCTCGCCTA CCGTCGCTAT GTCGCGACAA 60
AGCACCTTAT ACAGCTTCTT CCCCAAGTCT CCAGCGTTGA ATAATGCCAA CAAGGCTTCT 120
ACCAGGGCCT CACGCGAAAG CGGCGGTGCT GCTGCGGCGG CTACCCGGGC CTCCCCTTCC 180
CCTGGCGGGG ATGTGGCCCG GAGCGAGGCT GGGCCTGGGC ACAGGCCCTT GGGGTCCTCC 240
GCGTCGCCTC CTGAGGCGAA GAACCTCAAC GGAAGGCTGC GGAGGTCGGC AGCACCCGCA 300
GTCCCGGCCA GTTCTTGTGA CTTCTCACCA GGTGATTTGG TTTGGGCCAA GATGGAGGGT 360
TATCCCTGGT GGCCTTGCCT GGTTTACAAC CACCCCTTTG ATGGAACATT CATCCGCGAG 420
AAAGGGAAAT CAGTCCGTGT TCATGTACAG TTTTTTGATG ATAGCCCAAC AAGGGGCTGG 480
GTTAGCAAAA GGCTATTAAA GCCATATACA GGTTCAAAAT CAAAGGAGGC CCAGAAGGGA 540
GGCCATTTTT ACAGTTCAAA GCCTGAAATA CTTAGAGCAA TGCAACGTGC AGATGAAGCC 600
TTAAATAAAG ACAAGGCTGA GAGGCTTGAA TTGGCAGTTT GTGATGAGCC CTCAGAGCCA 660
GAAGAGGAGG AAGAGATGGA GGTAGGTGCA ACTTATGCAT CAGATAAGAG TGAAGAAGAT 720
AATGAAATTG AGAGTGAAGA GGAAGTGAAG CCTAAGATGG AAGGATCTAG GCGAAGTAGC 780
CGTCAAGTAA AAAAAAGGAG GGTCATATCA GACTCTGAGA GTGACATTGG TGGCTCTGAT 840
GTGGAATTCA AACCAGATGC TAAGGAGGAA GGAAGCAGTG ATGAAATAAG CAGTGGAGTG 900
GGGGATAGCG AGAGTGAAGG CCTGGACAGC CCTGTCAAAG TTGCTCCAAA ACGTAAGAGA 960
ATGGTGACAG GAAGTAGTGC TTTTAAAAGG AAAAGTTCAA GAAAAGAAAT GCCCTCAACC 1020
ACCAAAAGAG CAGCTGGCAT TTTATCAGAA ACCAAAAATA CTTTGAGTGC TTTCTCTGCT 1080
CCTCAAAATT CTGATTCTCA AGCCCATGTT AGTGGAGGGG GTGATAATAG TAGTCGCCCC 1140
ACTACCTGGT ATCATGAAAC TTTAGAATGG CTTAAGAAGG AAAAGAGAAG AGATGAGCAT 1200
AGGAGGCGGC CTGATCACCC CGATTTTGAT GCATCCACAC TCTATGTGCC TGAAGATTTC 1260
CTTAATTCCT GTACTCCTGG TATGAGGAAG TGGTGGCAGA TTAAGTCTCA GAACTTTGAT 1320
CTTGTTATCT TTTATAAGGT GGGGAAGTTT TACGAACTGT ATCACATGGA TGCTCTTATT 1380
GGAGTCAATG AATTGGGACT GGTATTCATG AAAGGCAACT GGGCCCATTC TGGTTTTCCT 1440
GAAATTGCAT TTGGCCGGTA CTCAGATTCC CTGGTACAGA AGGGCTATAA AGTAGCACGG 1500
GTGGAACAGA CTGAAACTCC TGAGATGATG GAGGCACGAT GCCGAAAGAT GGCACATATA 1560
TCTAAGCATG ATAGAGTGGT GAAGAGAGAA ATTTGTAGGA TCATTACTAA GGGTACACAG 1620
ACCTATAGTG TGCTGGAAGG TGATCCCTCT GAGAACTACA GTAAATATCT TCTTAGCCTC 1680
AAAGAAAAAG AGGAAGATTC TTCTGGCCAC ACTCGCATGT ATGGTGTGTG CTTTGTTGAT 1740
ACTTCCCTGG GAAAGTTTTT CATAGGTCAG TTTTCAGATG ATCGTCATTG TTCCAGATTT 1800
AGGACTCTAG TAGCACACTA TCCTCCAGTA CAAGTCTTGT TTGAAAAAGG AAATCTCTCA 1860
GTGGAGACGA AGACAATTCT AAAGAGTTCA TTATCCTCCT CTCTTCAGGA AGGTCTGACA 1920
CCAGGGTCCC AATTTTGGGA TGCAGCTAAA ACTTTGAGAA CTCTCCTTGA AGAGGGCTAT 1980
TTTACTGAAA AACTAAATGA GGACAGTGGG GTGATGTTGC CCCAGGTACT TAAAGATATG 2040
ACCTCAGAGT CTGATTCCAT TGGGCTGACA CCAGGAGAAA AAAGTGAATT GGCCCTCTCT 2100
GCTCTAGGTG GTTGTGTCTT CTACCTCAAA AAATGCCTTA TTGATCAGGA GCTTTTATCC 2160
ATGGCTAATT TCGAAGAATA TATTCCCTTG GATTCTGACA TGGTCAATAC AAGATCTGGT 2220
GCTAAATTTA CTAAAGCTAA TCAACGAATG GTGCTAGATG CAGTGACGTT AAACAACTTG 2280
GAGATTTTTG TAAATGGGAC AAATGGTTCT ACTGAAGGGA CCCTGCTAGA AAGAATTGAT 2340
ACTTGCCATA CTATTTTTGG TAAACGGCTT CTAAAACAGT GGCTTTGTGC TCCGCTGTGT 2400
AGCCCTTTTG CTATCAATGA CCGTCTAAAT GCCATAGAAG ACCTCATCGT CGTGCCTGAC 2460
AAAATCTCTG AAGTTACAGA GCTTCTAAAG AAGCTGCCAG ATCTTGAGAG GCTACTGAGT 2520
AAAATTCATA ATGTTGGTTC TCCCCTAAAG AGCCAGAACC ACCCTGATAG CAGGGCTATA 2580
ATGTATGAAG AAACTACATA TAGCAAAAAA AAGATCATTG ATTTTCTTTC TGCACTTGAA 2640
GGATTCAAAG TAATGTGTAA AATTATAGGA ATTATGGAAG AAGTTGTTGA TGATTTTAAG 2700
TCCAAAATCC TTAAGCAGGT CGTTACTCTA CAGACAAAAA ATCCTGAAGG CTGCTTCCCT 2760
GATTTGACTT CAGAACTGAA TCGATGGGAT ACAGCCTTTG ACCACGAAAA AGCTCGAAAG 2820
ACTGGACTGA TTACTCCCAA AGCAGGATTT GACTCTGATT ATGACCAAGC GCTTGCCGAC 2880
ATACGAGAAA ATGAGCAGAG CCTCTTAGAA TACTTAGAGA AACAGCGCAA TCGAATAGGC 2940
TGTAGGACCA TAGTATATTG GGGGATTGGT AGGAACCGTT ACCAGTTGGA AATTCCAGAG 3000
AATTTTACCA CCCATAATTT GCCAGAAGAA TATGAGCTGA AATCTACCAA GAAGGGCTGT 3060
AAACGATACT GGACCAAAAC TATTGAGAAG AAGTTGGCTA ATCTGATAAA TGCTGAAGAA 3120
CGCAGAGATA TATCGTTGAA GGACTGCATG CGGCGACTGT TCTATAATTT TGATAAAAAT 3180
TACAAGGACT GGCAGTCTGC TGTAGAGTGC ATTGCAGTAT TGGATGTCTT AATATGTCTG 3240
GCTAACTATA GTCAAGGTGG TGATGGTCCT ATGTGTCGCC CAGTGATTCT GTTACCAGGA 3300
GAAGACACTC TCCCTTTCTT AGAGCTTAAA GGTTCACGAC ATCCCTGCAT TACGAAGACT 3360
TTTTTTGGAG ATGATTTTAT TCCTAATGAC ATTCTAATAG GCTGTGAGGA AGAAGAGAAA 3420
GAAAATGGCA AAGCTTATTG TGTGCTTGTT ACTGGACCGA ATATGGGGGG CAAGTCTACA 3480
CTCATAAGAC AGGCTGGCCT GTTAGCTGTA ATGGCCCAGA TGGGTTGTTA TGTACCTGCT 3540
GAAGTTTGTA GGCTCACACC AGTTGACAGA GTGTTTACTA GACTTGGTGC CTCAGATAGA 3600
ATAATGTCAG GTGAAAGTAC ATTTTTTGTT GAATTAAGTG AAACTGCCAG CATACTTACA 3660
CATGCAACAG CCCATTCCCT TGTGCTTATG GATGAATTAG GAAGAGGTAC TGCAACATTT 3720
GATGGGACAG CAATAGCAAA TGCAGTTGTT AAAGAACTTG CTGAGACGAT AAAGTGTCGT 3780
ACATTGTTTT CTACCCACTA TCATTCATTG GTAGAAGAAT ATTCTAAAAA TGTTGCTGTG 3840
CGCCTAGGAC ATATGGCATG CATGGTAGAA AATGAGTGTG AAGACCCAAG CCAGGAGACT 3900
ATTACCTTCC TCTATAAATT CATTAAGGGA GCTTGTCCTA AGAGCTATGG CTTTAATGCA 3960
GCAAGGCTTG CTAATCTTCC AGAGGAAGTC ATTCAAAAGG GACATAGAAA AGCAAGAGAA 4020
TTTGAGAGGA TGAATCAGTC ACTACGACTA TTTCGGGAAG TTTGCCTGGC TAGTGAAAGG 4080
TCGACTCTAG ATGCTGAAGC TGTCCATAAG TTGCTGAGTT TGATTAAAGA GTTATAG 4138
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 92 0.0 2366
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 92 0.0 2364
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 92 0.0 2357
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 92 0.0 2352
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 92 0.0 2345
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 91 0.0 2344
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 91 0.0 2335
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 91 0.0 2328
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 90 0.0 2325
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 93 0.0 2324
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 91 0.0 2324
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 90 0.0 2311
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 89 0.0 2302
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 89 0.0 2295
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 94 0.0 2293
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 89 0.0 2293
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 90 0.0 2285
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 90 0.0 2281
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 89 0.0 2278
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 89 0.0 2277
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 88 0.0 2274
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 92 0.0 2261
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 93 0.0 2222
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 85 0.0 2196
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 85 0.0 2181
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 90 0.0 2138
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 77 0.0 2002
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 80 0.0 1991
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 71 0.0 1733
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 70 0.0 1732
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 65 0.0 1729
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 70 0.0 1718
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 71 0.0 1702
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 86 0.0 1636
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 62 0.0 1619
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 73 0.0 1603
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 62 0.0 1582
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 89 0.0 1576
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 70 0.0 1550
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 60 0.0 1546
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 67 0.0 1458
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 68 0.0 1445
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 67 0.0 1437
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 67 0.0 1427
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 59 0.0 1420
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 67 0.0 1415
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 67 0.0 1415
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 92 0.0 1390
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 66 0.0 1390
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 92 0.0 1276
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 59 0.0 1239
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 50 0.0 1005
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 89 0.0 987
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 93 0.0 958
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 93 0.0 838
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 90 0.0 790
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 82 0.0 710
WERAM-Met-0160 AES82183 Medicago truncatula 41 0.0 660
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 93 2e-177 621
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 92 1e-165 582
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 62 2e-24 112
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 4e-12 72.0
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 33 8e-12 71.2
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 9e-12 70.9
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 32 2e-11 69.7
WERAM-Sei-0090 Si024584m Setaria italica 36 3e-06 52.8
Created Date 25-Jun-2016