WERAM Information

Tag Content
WERAM ID WERAM-Gaa-0054
Ensembl Protein ID ENSGACP00000007160.1
Gene Name msh6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGACG00000005392.1 ENSGACT00000007178.1 ENSGACP00000007160.1
ENSGACG00000005392.1 ENSGACT00000007188.1 ENSGACP00000007170.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 3.90e-17 62.6 96 156
Organism Gasterosteus aculeatus
Domain Profile
  Me_Reader PWWP
              PWWP.txt   2 gdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           g LVwaKl+g pwWP++v+ +pl+++++ +   ++++++V FF++  +r wv+ k + +y++
  ENSGACP00000007160.1  96 GALVWAKLEGHPWWPCMVVPQPLTGQQM-RGRGRSQRVHVHFFDEPATRGWVSTKYIREYQG 156
                           78*************************9.999***************************986 PP
Protein Sequence
(Fasta)		MAKQSSLFSF FTKSPPPVSK PKPSPSPTEA DLPSSVQRSS SSPKEQAKET PQQAAKAGRV 60
DAKRNDKSSK GGFNKLFGDK APAVKPSSST CPFSAGALVW AKLEGHPWWP CMVVPQPLTG 120
QQMRGRGRSQ RVHVHFFDEP ATRGWVSTKY IREYQGSDSS DAKTGGVFFS GKPTIRRAME 180
LADGVMFDSP EKRIKIPLCM DPSDEEEDEE EDMELDTSTL TDDCSDEEEQ ADVKAKSSKL 240
GLRSSRASTE TGNKAKRRRI IVASDSDGSD EEFNPQKAAS SKAAATLSSE EESTHESESE 300
SPVKPVKRKR PAEKPAPLKA KTPTSLSTAA KRAPAAIAVD TKSRLSAFSA PDGFESPSNG 360
AGGAGSTTTW DHEKLEWCQD GRRKDGRRRR QSEDDYDPAT LYVPEDFLNR ISPGMRRWWQ 420
IKSQMFDTVV FYKVGKFYEL YHMDAVIGVN ELGLTFMKGT WAHSGFPEIG FARFSDGLVQ 480
KGYKVARVEQ TETPEMMEAR CRSMAKPTKF DRVVRREVCR IITRGTQTYS VLDGAPSESQ 540
SKFLLSLKEK AEEDGSGCCR SYGVCFVDTS VGCFHVGQFP DDRHCSRLRT LIAHYAPAEV 600
LFEKGNPSVE TRKILKASLS SALQEGLSAG TQFWDAQKTL KQLSEEDYFR EAAGEDRGTG 660
TGFLPALLKS MTSASDSLCL TPKEGCELGL SALGGCIFYL KKCLVDQELL SLANFEEYVP 720
VDVELERAAG PAGFFAKTRQ RLVLDGVTLA NLEIFQNGTG GTEGTLLERL DTCSTPFGKR 780
LLKQWLCAPL CNPTSIGDRL QAVEELMGAA AQASEVSELL KKLPDLERLL SKIHSIGTPL 840
KGQDHPDGRA VLYEEVTYSK RKIADFLSAL EGFKTMQEVV AVLAAVSSES QSALLRQVGT 900
LKSGQGGLFP DLSAELRRWE TAFDHQKARA TGVITPKAGF DPEFDQARAS IQSCERELQE 960
YLDRQKKRLG CRTMSYWGTG RNRYQMEVPD SGVSVPAEYD VKSTKKGWKR YVTKETERLF 1020
SELQGFEEKR DAALKDCMRR LFYNFDKNYK DWKTAVECMA VIDVLLALSR YSQGGDGPMS 1080
RPQVVLPESG DQVSTFLELV GSRHPCVTKT FFGDDFIPND VVIGCPGGGE ADAGKERASC 1140
VLVTGPNMGG KSTLMRQCGL VVILAQLGCY VPAETLRFTP VDRVFTRLGA SDRIMAGEST 1200
FFVELSETAS ILHHATKHSL VLLDELGRGT ATYDGTAIAS AVVKELAEKI CCRTLFSTHY 1260
HSLVEDYANN PAVRLGHMAC MVENECEDPS QETITFLYKF IAGACPKSYG FNAARLASLP 1320
EAVIQSGHRK ASEFEKSTIS LRLFKKLCRF ADDATLGGSH FSSLVEMLHS L 1371
Nucleotide Sequence
(Fasta)		CTGAGACGCA CGCAGGTGCC GTCGTGTGCA TTATAGCAGC AATACAACGA CACACAACAC 60
AACATGGCGA AGCAAAGCTC CCTGTTCAGT TTTTTCACCA AGTCTCCGCC GCCGGTCTCC 120
AAGCCGAAGC CGAGTCCCTC GCCGACCGAG GCGGACCTGC CCTCCTCCGT ACAGAGGTCC 180
AGCTCCTCTC CGAAGGAGCA AGCTAAGGAG ACACCGCAGC AAGCTGCCAA GGCCGGCAGA 240
GTGGACGCGA AAAGGAACGA CAAGTCTTCC AAAGGGGGAT TCAACAAACT TTTTGGCGAC 300
AAGGCCCCGG CAGTCAAACC GAGCAGCAGC ACATGTCCAT TCAGTGCTGG TGCCCTTGTG 360
TGGGCAAAAC TGGAGGGACA CCCGTGGTGG CCGTGCATGG TGGTACCCCA ACCTCTGACC 420
GGACAGCAGA TGAGGGGCCG CGGGCGCAGC CAGCGCGTAC ACGTCCATTT CTTCGATGAA 480
CCCGCCACAA GAGGATGGGT CAGCACCAAG TATATCAGGG AGTACCAAGG CTCCGACAGC 540
AGTGATGCTA AAACAGGAGG GGTTTTCTTC AGCGGTAAAC CAACAATCCG TCGTGCGATG 600
GAGCTCGCGG ATGGAGTAAT GTTTGACAGC CCTGAAAAAA GAATAAAGAT TCCTCTCTGC 660
ATGGATCCGT CTGATGAGGA GGAGGATGAG GAGGAAGACA TGGAGCTCGA CACGTCAACG 720
TTGACAGACG ACTGCAGTGA TGAGGAAGAA CAGGCGGATG TGAAAGCAAA GTCCTCCAAG 780
CTCGGCCTGC GTTCGTCCCG CGCTTCGACA GAAACGGGAA ACAAGGCCAA GCGCCGGCGC 840
ATAATTGTCG CTTCTGACAG TGATGGATCA GATGAGGAAT TCAACCCACA AAAGGCTGCC 900
TCCAGCAAAG CCGCAGCGAC GCTGAGCAGC GAGGAAGAGA GCACACACGA GTCTGAATCA 960
GAAAGCCCCG TCAAGCCCGT GAAGCGTAAA CGCCCAGCAG AAAAGCCCGC TCCTTTAAAA 1020
GCTAAGACGC CAACAAGCCT GTCGACGGCA GCGAAGCGGG CGCCGGCGGC CATCGCCGTT 1080
GACACCAAGT CCCGCCTCTC GGCCTTTTCA GCCCCCGACG GCTTTGAGAG CCCGTCGAAC 1140
GGAGCGGGCG GCGCCGGAAG CACCACCACT TGGGACCACG AGAAGCTGGA GTGGTGTCAG 1200
GACGGCCGGA GAAAAGACGG CCGGCGGCGG CGACAGTCGG AGGACGACTA CGATCCCGCC 1260
ACCCTCTACG TGCCGGAGGA CTTCCTGAAC CGCATCAGCC CCGGTATGCG GCGGTGGTGG 1320
CAGATCAAAT CCCAGATGTT CGACACAGTC GTTTTCTACA AGGTGGGGAA GTTTTACGAG 1380
CTCTACCACA TGGACGCCGT GATCGGCGTC AACGAGCTCG GCCTGACCTT CATGAAGGGC 1440
ACCTGGGCGC ACTCGGGCTT CCCCGAAATC GGCTTCGCTC GCTTCTCGGA CGGCCTGGTG 1500
CAGAAAGGCT ACAAGGTGGC CCGCGTGGAG CAGACGGAGA CTCCGGAGAT GATGGAGGCC 1560
CGCTGCAGGA GCATGGCCAA GCCCACCAAA TTTGACCGCG TGGTGAGGCG AGAGGTGTGC 1620
CGGATCATCA CCCGCGGCAC CCAAACTTAC AGCGTGTTGG ACGGCGCGCC GTCCGAGAGC 1680
CAGAGCAAGT TCCTGCTGAG TTTGAAGGAG AAGGCCGAGG AGGACGGCTC CGGTTGCTGC 1740
CGCAGCTACG GCGTCTGCTT CGTGGACACC TCCGTGGGTT GTTTCCACGT CGGCCAGTTC 1800
CCGGACGACC GCCACTGCTC GCGCCTGCGC ACCCTGATCG CGCACTACGC CCCGGCCGAG 1860
GTGCTCTTTG AGAAGGGGAA CCCCTCCGTG GAGACGCGCA AGATTCTCAA GGCCTCTCTG 1920
TCCTCCGCCC TGCAGGAAGG ACTCAGCGCG GGCACTCAGT TCTGGGACGC TCAGAAGACC 1980
CTGAAACAAC TTTCGGAAGA GGATTACTTC AGGGAGGCCG CTGGCGAGGA CCGCGGGACG 2040
GGAACCGGCT TCCTCCCAGC TCTTCTGAAG TCGATGACGT CCGCAAGCGA CTCGCTGTGC 2100
CTCACGCCCA AAGAGGGGTG CGAGCTGGGG CTGTCGGCGC TGGGCGGCTG CATCTTCTAC 2160
CTGAAGAAAT GTCTGGTGGA CCAGGAGCTG CTCTCTCTGG CCAACTTTGA AGAATACGTT 2220
CCCGTCGACG TGGAGCTGGA GAGAGCCGCC GGACCTGCCG GCTTCTTCGC CAAGACTCGC 2280
CAGCGGCTTG TCCTCGACGG CGTGACGCTG GCCAACTTGG AAATCTTCCA GAACGGCACG 2340
GGGGGAACCG AAGGGACTCT TCTGGAGCGT TTGGACACGT GCTCGACGCC GTTCGGCAAG 2400
AGGCTTCTGA AGCAGTGGCT CTGCGCTCCC CTGTGCAACC CCACCTCCAT CGGGGACCGG 2460
CTGCAGGCGG TGGAGGAGCT GATGGGCGCC GCGGCTCAGG CCAGCGAGGT CTCAGAGCTG 2520
CTGAAGAAGC TCCCGGATCT GGAGCGTCTC CTGAGCAAAA TCCACAGCAT CGGCACGCCA 2580
CTGAAGGGCC AGGACCACCC GGACGGCCGC GCAGTGCTCT ACGAGGAGGT CACCTACAGC 2640
AAGCGCAAGA TCGCGGACTT TCTCTCGGCC CTGGAAGGCT TCAAGACCAT GCAAGAGGTC 2700
GTCGCCGTCC TCGCCGCGGT GTCGAGCGAA TCCCAATCGG CGCTGCTCCG GCAGGTGGGC 2760
ACACTGAAAA GCGGGCAGGG CGGCCTCTTC CCCGACCTCT CGGCCGAACT CCGCCGCTGG 2820
GAGACGGCCT TCGACCACCA GAAAGCGCGC GCCACCGGCG TGATCACCCC TAAGGCCGGC 2880
TTCGACCCAG AGTTCGACCA GGCCCGGGCC TCCATCCAGA GCTGTGAGCG AGAGCTGCAG 2940
GAGTACCTCG ACCGGCAGAA GAAGAGACTC GGCTGCAGGA CCATGTCGTA CTGGGGAACC 3000
GGGCGAAACC GTTACCAGAT GGAGGTGCCT GACAGCGGCG TCAGCGTTCC CGCGGAGTAC 3060
GACGTGAAGT CCACAAAGAA AGGCTGGAAG CGCTACGTGA CCAAGGAGAC CGAGCGGCTG 3120
TTCTCCGAGC TGCAGGGGTT CGAGGAGAAG AGAGACGCCG CCCTCAAGGA CTGCATGAGG 3180
AGGCTCTTCT ACAACTTTGA CAAGAACTAC AAAGACTGGA AGACCGCCGT GGAGTGCATG 3240
GCAGTGATCG ACGTGCTGCT GGCCCTGTCC CGCTACAGTC AGGGTGGAGA CGGGCCGATG 3300
TCCAGGCCGC AGGTGGTGCT CCCTGAAAGC GGTGACCAGG TGTCAACCTT CCTCGAGCTC 3360
GTGGGATCCC GCCACCCCTG CGTCACCAAG ACCTTCTTCG GCGACGACTT CATCCCCAAC 3420
GACGTTGTCA TCGGCTGCCC CGGCGGCGGT GAAGCCGACG CGGGGAAAGA GCGAGCCTCC 3480
TGTGTCCTCG TCACGGGGCC GAACATGGGC GGCAAGTCGA CCCTCATGAG ACAGTGCGGA 3540
CTCGTCGTCA TCCTGGCGCA GCTGGGCTGC TACGTTCCCG CCGAGACGCT GCGCTTCACG 3600
CCCGTCGACC GGGTCTTTAC TCGGCTGGGA GCCTCCGACC GCATCATGGC CGGAGAGAGT 3660
ACCTTCTTTG TGGAGCTGAG TGAGACGGCC AGCATCCTGC ACCACGCCAC CAAGCACTCG 3720
CTCGTGCTCC TGGATGAATT GGGGAGGGGC ACGGCCACGT ACGACGGCAC GGCCATCGCC 3780
AGCGCCGTGG TGAAGGAGCT GGCCGAGAAG ATCTGCTGTC GCACCCTCTT CTCGACCCAC 3840
TACCACTCGC TGGTGGAGGA CTACGCCAAC AACCCCGCCG TGCGGCTCGG CCACATGGCG 3900
TGCATGGTGG AAAACGAATG TGAGGACCCG AGTCAGGAGA CCATCACATT CCTCTACAAG 3960
TTCATTGCTG GCGCCTGTCC GAAGAGTTAC GGGTTCAACG CCGCTCGACT CGCCAGCCTG 4020
CCCGAGGCTG TCATCCAATC GGGACACAGG AAGGCCAGCG AGTTTGAGAA GAGCACCATC 4080
AGCCTCAGAC TTTTTAAGAA GCTGTGCCGG TTTGCTGACG ACGCCACGCT GGGAGGAAGC 4140
CACTTCTCTT CACTCGTTGA GATGCTCCAC AGCCTGTAGT TAATAAAATG AAAAAAAGCT 4200
TGGCTCTCGC TGGATGTTTG TTTTGTCAGC GCTTGAAAAA ACACTACTGT AATGATCTAA 4260
TAA 4264
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 80 0.0 2070
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 79 0.0 2018
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 78 0.0 2011
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 78 0.0 2010
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 79 0.0 1998
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 78 0.0 1908
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 77 0.0 1905
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 69 0.0 1744
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 74 0.0 1684
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 65 0.0 1632
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 63 0.0 1557
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 62 0.0 1529
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 63 0.0 1524
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 63 0.0 1519
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 62 0.0 1514
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 63 0.0 1506
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 61 0.0 1504
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 62 0.0 1503
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 61 0.0 1502
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 62 0.0 1498
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 60 0.0 1497
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 62 0.0 1491
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 61 0.0 1490
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 60 0.0 1488
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 62 0.0 1488
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 59 0.0 1488
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 61 0.0 1488
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 63 0.0 1487
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 62 0.0 1486
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 61 0.0 1485
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 61 0.0 1484
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 61 0.0 1482
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 62 0.0 1481
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 61 0.0 1481
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 61 0.0 1481
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 61 0.0 1480
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 60 0.0 1478
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 60 0.0 1478
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 61 0.0 1477
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 59 0.0 1476
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 61 0.0 1475
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 61 0.0 1468
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 60 0.0 1455
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 61 0.0 1454
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 59 0.0 1391
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 61 0.0 1374
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 57 0.0 1315
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 66 0.0 1147
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 45 0.0 1033
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 55 0.0 953
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 66 0.0 900
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 58 0.0 824
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 69 0.0 736
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 68 0.0 688
WERAM-Met-0160 AES82183 Medicago truncatula 40 2e-175 614
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 62 3e-148 524
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 61 3e-142 504
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 73 6e-130 463
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 62 2e-107 388
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 58 2e-102 372
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 62 2e-31 136
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 42 5e-09 62.0
WERAM-Fia-0085 ENSFALP00000006989.1 Ficedula albicollis 42 9e-09 60.8
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 40 1e-08 60.8
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 34 3e-07 55.5
Created Date 25-Jun-2016