WERAM Information

Tag Content
WERAM ID WERAM-Cap-0004
Ensembl Protein ID ENSCPOP00000000836.2
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCPOG00000000931.3 ENSCPOT00000000937.2 ENSCPOP00000000836.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 5.10e-23 81 93 154
Organism Cavia porcellus
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ +++V+FF+++++r wv+++ l+py++
  ENSCPOP00000000836.2  93 PGDLVWAKMEGYPWWPCLVYNHPFDGTCI-REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTV 154
                           69***************************.*******************************86 PP
Protein Sequence
(Fasta)		MSRQSTLYSF FPKSPALNNA NKGPARSSRE GGSGAARGAS PSGGDAARRD AGPGPQPTAA 60
SVSPPEGKNL NGGLRRSTAP AASASNSSCD FSPGDLVWAK MEGYPWWPCL VYNHPFDGTC 120
IREKGKSVRV HVQFFDDSPT RGWVSKRLLK PYTVGSKSKD AQKGGHFYSS KPEILRAMQR 180
ADEALNKNKT ERLELAVCDE PSEPEEEMEV GATYASEKSE EDNEIESEEE VRPKMQGSRR 240
SSRQRVMSDS ESDIGGSDVE FKPDTKEEGS SDEISSGAGD SESEGLDSPV KAAPKRKKMG 300
IGKIGFKKNS SRKETPSVTK RATGILSETK NTSSAFSVPQ NSESQAQGSG GGDDSCGPTV 360
WYHETLEWLK KEKRRDEHRR RPDHPDFDPS TLYVPEDFLN SCTPGMRKWW QIKSQNFDLV 420
IFYKVGKFYE LYHMDALVGV SELGLVFMKG NWAHSGFPEI AFGRYSDSLV QKGYKVARVE 480
QTETPEMMEA RCRKMAHISK YDKVVRREIC RIITKGTQTY SVLEGDPSEN YSKYLLSLKE 540
KEDSSGHVRL YGVCFVDTSL GKFFIGQFSD DRHCSRFRTL VAHYPPVQVL FEKGNLSVET 600
KTILKGTLSS SLQEGLIPGS QFWDAAKTLR TLLEEGYFTE KLNEDTGVML PSVLKGMTSE 660
SDSIGLTPGE NSELALSALG GCVFYLKKCL IDQELLSMAN FEEYIPLDSD MVSVRPGAIF 720
TKANQRMVLD AVTLNNLEIF LNGTNGSTEG TLLERIDTCY TPFGKRLLKQ WLCAPLCSPF 780
AINDRLDAVE DLMDVPDKIS EVTDLLKKLP DLERLLSKIH NVGSPLKSQN HPDSRAIMYE 840
ETTYSKKKII DFLSALEGFK VMCKIIEIME EVVDGFKSKI LKQVVTLQIK NPEGRFPDLT 900
TELNRWDTAF DHEKARRTGL ITPKAGFDSD YDQALADIRE NEQSLLEYLD KQRSRIGCRT 960
IVYWGIGRNR YQLEIPENFT IHNLPEEYEL KSTKKGCKRY WTKTIEKKLA NLINAEERRD 1020
VSLKDCMRRL FYNFDKNYKD WQCAVECIAV LDVLLCLANY SQGGDGPMCR PALLLPGEHN 1080
PPFLELRGSR HPCITKTFFG DDFIPNDILI GCEEQQEDGR AYCVLVTGPN MGGKSTLIRQ 1140
AGLLAVMAQM GCYVPAEMCR LTPVDRVFTR LGASDRIMSG ESTFFVELSE TASILRHATA 1200
HSLVLVDELG RGTATFDGTA IASAVVKELA ETIRCRTLFS THYHSLVEDY SKNVAVRLGH 1260
MACMVENECE DPSQETITFL YKFVQGACPK SYGFNAARLA HLPEEVIQKG HRKAREFEKM 1320
NQSLRLFREV CLASERSSID AEALHKLLTL IKKL 1354
Nucleotide Sequence
(Fasta)		ATGTCGCGAC AGAGTACTCT GTACAGCTTC TTCCCCAAGT CTCCGGCGTT AAACAATGCC 60
AACAAGGGCC CAGCTAGGTC CTCGCGCGAA GGCGGCAGCG GCGCGGCCCG CGGGGCCTCC 120
CCCTCTGGCG GCGATGCGGC CCGGAGAGAC GCTGGGCCTG GGCCCCAGCC TACGGCGGCC 180
TCCGTGTCGC CGCCCGAGGG CAAGAACCTG AACGGAGGGC TGCGGCGGTC GACAGCTCCT 240
GCGGCCTCCG CTAGCAACAG TTCCTGTGAC TTCTCACCAG GTGATTTGGT CTGGGCCAAG 300
ATGGAGGGCT ACCCCTGGTG GCCTTGCCTG GTTTACAACC ACCCCTTTGA TGGAACATGC 360
ATCCGTGAGA AAGGGAAGTC AGTTCGGGTT CATGTACAGT TTTTTGATGA CAGCCCAACA 420
AGGGGCTGGG TTAGCAAAAG GCTGCTAAAA CCCTACACAG TAGGTTCAAA ATCTAAGGAC 480
GCCCAGAAGG GAGGTCACTT TTATAGTTCA AAGCCTGAGA TACTCAGAGC AATGCAACGT 540
GCAGATGAAG CCTTAAATAA AAACAAGACT GAAAGACTGG AGTTGGCAGT GTGTGATGAG 600
CCCTCAGAGC CAGAAGAAGA GATGGAGGTA GGTGCAACTT ATGCATCAGA GAAGAGTGAA 660
GAAGATAATG AAATTGAGAG TGAAGAAGAA GTGCGGCCTA AGATGCAAGG ATCTAGGAGA 720
AGTAGTCGTC AAAGGGTCAT GTCAGACTCT GAGAGTGACA TTGGTGGCTC TGATGTGGAA 780
TTCAAGCCAG ACACTAAGGA GGAAGGAAGC AGTGATGAGA TAAGCAGTGG AGCTGGGGAC 840
AGTGAGAGCG AAGGCTTGGA CAGCCCTGTC AAAGCTGCTC CAAAGCGGAA GAAAATGGGA 900
ATTGGAAAGA TTGGTTTTAA AAAGAATAGT TCAAGGAAGG AAACACCTTC AGTTACCAAG 960
CGAGCGACTG GCATTTTATC AGAGACCAAA AATACTTCGA GTGCTTTCTC TGTCCCTCAA 1020
AATTCTGAAT CTCAAGCCCA AGGTAGTGGA GGAGGTGATG ACAGTTGTGG CCCGACTGTC 1080
TGGTATCATG AAACTTTAGA ATGGCTGAAG AAGGAAAAGA GAAGAGATGA GCACAGGAGG 1140
CGCCCTGATC ACCCTGATTT TGATCCATCC ACACTTTATG TGCCTGAAGA TTTCCTTAAT 1200
TCGTGTACTC CTGGTATGAG GAAGTGGTGG CAGATTAAGT CTCAGAACTT TGATCTTGTC 1260
ATCTTTTATA AAGTAGGGAA ATTTTATGAA CTGTACCATA TGGATGCTCT TGTTGGAGTC 1320
AGTGAACTGG GGCTGGTATT TATGAAAGGC AACTGGGCCC ATTCTGGTTT TCCTGAAATA 1380
GCATTTGGCC GATACTCTGA TTCCCTTGTG CAGAAAGGCT ATAAAGTAGC ACGAGTGGAA 1440
CAAACTGAAA CACCGGAAAT GATGGAGGCA CGGTGCAGAA AGATGGCACA TATATCTAAG 1500
TATGACAAGG TGGTGCGGAG AGAGATTTGT AGGATCATTA CCAAGGGTAC ACAGACCTAT 1560
AGTGTGCTTG AAGGTGACCC TTCTGAGAAC TATAGTAAAT ATCTTCTTAG CCTCAAAGAA 1620
AAAGAAGATT CTTCTGGCCA CGTTCGACTA TATGGTGTGT GCTTTGTTGA CACTTCACTG 1680
GGAAAGTTTT TCATAGGTCA GTTTTCAGAC GATCGCCATT GTTCAAGATT TAGGACTCTT 1740
GTGGCACACT ATCCTCCAGT ACAAGTCTTG TTTGAGAAAG GAAATCTCTC AGTGGAAACT 1800
AAGACAATTC TGAAAGGAAC ATTATCCTCT TCTCTTCAGG AAGGTCTGAT ACCAGGCTCC 1860
CAATTTTGGG ATGCAGCCAA GACTTTGCGA ACTCTTCTTG AAGAAGGGTA CTTTACTGAA 1920
AAGCTAAATG AGGACACTGG GGTGATGTTA CCCTCGGTGC TTAAAGGTAT GACCTCAGAG 1980
TCCGATTCCA TTGGGTTGAC ACCAGGAGAG AACAGTGAAC TGGCTCTCTC TGCTCTAGGT 2040
GGTTGTGTCT TCTACCTCAA AAAATGCCTT ATTGATCAGG AGCTTTTATC AATGGCTAAT 2100
TTTGAAGAAT ACATACCTTT GGATTCTGAC ATGGTCAGTG TAAGACCTGG TGCTATTTTT 2160
ACTAAAGCCA ATCAACGAAT GGTGCTAGAT GCAGTGACAT TAAACAATTT AGAGATTTTT 2220
CTGAATGGGA CCAATGGTTC TACTGAAGGG ACCCTGTTAG AGAGGATTGA TACTTGCTAT 2280
ACTCCCTTTG GTAAGCGGCT CCTAAAGCAG TGGCTTTGTG CCCCACTCTG TAGTCCTTTT 2340
GCTATCAATG ATCGCTTAGA TGCAGTGGAA GATCTCATGG ATGTGCCTGA CAAAATCTCT 2400
GAAGTTACAG ACCTTCTAAA AAAGCTTCCA GATCTTGAGA GGTTATTGAG TAAAATTCAT 2460
AATGTTGGTT CTCCTCTAAA GAGCCAGAAC CACCCTGATA GTAGAGCTAT AATGTATGAG 2520
GAAACTACAT ACAGCAAGAA AAAGATCATT GATTTTCTTT CAGCCCTAGA AGGCTTCAAA 2580
GTAATGTGTA AAATTATAGA GATTATGGAA GAAGTTGTTG ATGGTTTTAA GTCTAAAATT 2640
CTTAAGCAAG TAGTTACTCT TCAGATCAAA AATCCTGAAG GACGCTTTCC TGATTTGACT 2700
ACAGAACTGA ATCGATGGGA TACAGCCTTT GACCATGAAA AGGCTCGAAG GACTGGACTG 2760
ATAACTCCCA AAGCAGGATT TGATTCTGAT TATGATCAAG CTCTTGCTGA CATAAGAGAA 2820
AATGAACAGA GCCTCCTAGA GTACCTAGAC AAACAGCGCA GTCGAATTGG CTGTAGGACT 2880
ATAGTCTACT GGGGGATTGG TAGAAACCGT TACCAGTTAG AAATTCCAGA GAATTTCACC 2940
ATCCATAATT TACCAGAAGA ATATGAACTG AAGTCTACCA AAAAGGGCTG TAAACGATAC 3000
TGGACCAAAA CTATTGAGAA GAAGTTGGCT AACCTGATAA ATGCTGAGGA ACGTAGAGAT 3060
GTGTCACTGA AGGACTGCAT GCGGCGACTG TTCTATAACT TTGACAAAAA TTACAAGGAC 3120
TGGCAATGTG CTGTTGAGTG CATCGCGGTG TTGGATGTCT TACTGTGCCT TGCTAACTAC 3180
AGTCAAGGGG GTGATGGTCC TATGTGTCGC CCAGCACTTC TGTTACCAGG AGAACACAAT 3240
CCACCTTTCT TAGAGCTTAG AGGATCACGA CACCCCTGTA TCACAAAGAC TTTTTTTGGG 3300
GATGATTTTA TTCCTAATGA CATCCTCATA GGCTGTGAAG AACAACAGGA AGACGGCAGA 3360
GCCTATTGTG TGCTTGTTAC TGGACCAAAT ATGGGGGGCA AGTCTACACT CATAAGACAG 3420
GCTGGCCTGT TGGCTGTAAT GGCCCAGATG GGCTGTTACG TCCCTGCGGA AATGTGCAGG 3480
CTCACACCAG TTGATAGAGT GTTTACTAGA CTTGGTGCCT CAGATAGAAT AATGTCTGGT 3540
GAAAGTACAT TTTTTGTTGA ATTGAGTGAA ACCGCCAGCA TACTTAGGCA TGCAACAGCA 3600
CATTCTCTGG TGCTTGTGGA TGAATTAGGA AGAGGTACTG CCACATTTGA CGGGACAGCA 3660
ATAGCAAGTG CAGTTGTTAA AGAACTTGCT GAGACCATAA GGTGTCGCAC ATTGTTTTCT 3720
ACCCACTACC ATTCATTAGT AGAGGATTAT TCTAAGAACG TTGCTGTGCG CCTAGGACAT 3780
ATGGCATGCA TGGTAGAAAA TGAATGTGAG GATCCCAGTC AGGAGACTAT TACCTTCCTT 3840
TATAAATTTG TTCAAGGAGC TTGTCCTAAG AGCTATGGCT TTAATGCAGC AAGACTTGCT 3900
CATCTCCCAG AAGAAGTTAT TCAAAAGGGA CATAGAAAAG CAAGAGAATT TGAGAAGATG 3960
AATCAGTCAC TACGACTATT TCGGGAAGTC TGCCTGGCTA GTGAAAGGTC GTCTATAGAT 4020
GCTGAAGCAC TCCATAAGTT GCTGACTTTG ATTAAGAAAT TA 4063
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 89 0.0 2315
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 89 0.0 2291
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 89 0.0 2290
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 88 0.0 2288
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 87 0.0 2288
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 89 0.0 2286
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 89 0.0 2277
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 88 0.0 2271
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 88 0.0 2268
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 88 0.0 2263
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 87 0.0 2262
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 90 0.0 2249
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 88 0.0 2248
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 87 0.0 2245
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 86 0.0 2239
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 91 0.0 2239
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 87 0.0 2238
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 88 0.0 2237
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 86 0.0 2233
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 86 0.0 2232
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 89 0.0 2218
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 86 0.0 2207
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 90 0.0 2192
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 84 0.0 2179
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 83 0.0 2164
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 87 0.0 2102
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 80 0.0 2003
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 79 0.0 1988
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 70 0.0 1775
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 70 0.0 1740
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 68 0.0 1738
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 68 0.0 1720
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 65 0.0 1718
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 65 0.0 1715
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 70 0.0 1710
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 61 0.0 1607
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 84 0.0 1594
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 61 0.0 1592
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 88 0.0 1579
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 64 0.0 1577
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 60 0.0 1567
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 59 0.0 1550
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 62 0.0 1530
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 59 0.0 1522
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 61 0.0 1517
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 63 0.0 1516
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 58 0.0 1507
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 62 0.0 1428
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 57 0.0 1380
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 88 0.0 1332
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 90 0.0 1262
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 47 0.0 1085
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 89 0.0 991
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 91 0.0 939
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 92 0.0 839
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 90 0.0 797
WERAM-Met-0160 AES82183 Medicago truncatula 40 0.0 669
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 92 2e-175 614
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 90 7e-162 569
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 87 9e-161 565
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 64 3e-25 115
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 7e-11 67.8
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 48 1e-10 67.0
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 32 9e-10 64.3
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 33 2e-09 63.2
WERAM-Sei-0090 Si024584m Setaria italica 36 3e-06 52.8
Created Date 25-Jun-2016