WERAM Information

Tag Content
WERAM ID WERAM-Ocp-0051
Ensembl Protein ID ENSOPRP00000004458.1
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSOPRG00000004827.1 ENSOPRT00000004840.1 ENSOPRP00000004458.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 2.50e-23 81.7 91 152
Organism Ochotona princeps
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +q+ ++ + +V+FF+++++r wv ++ l+py++
  ENSOPRP00000004458.1  91 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-RQKGKSVRIHVQFFDDTPTRGWVAKRLLKPYTG 152
                           69***************************.*******************************86 PP
Protein Sequence
(Fasta)		MSRQSTLFSF FPKSPVLSKP PARASREGGD ARAGTGASAS PGGDAASSEA GGPGRGPAAD 60
SASPARTRSF NGGLRRAAAP AAAPVSCDFS PGDLVWAKME GYPWWPCLVY NHPFDGTFIR 120
QKGKSVRIHV QFFDDTPTRG WVAKRLLKPY TGSKSKDAQK GGHFYSSKPE ILRAMQRADE 180
AMSKDKNKRL ELAVCDEPSE PEEEEEMEXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 240
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 300
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 360
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 420
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 480
XVEQADTPEM IEARFEKMAH ISKHDKVVRR EICRIITKGT QTYSVLEGDP SENHSKYLLS 540
LKEKEADSSG HTRVYGVCFV DASLGKFFLG QFSDDRHCSR LRTLVAHYPP VQVLFEKGNL 600
SMETKSVLKG SLSSCLQEAL IPGSQFWDAG KTLRTLLEEG YFTEKVNVDS GVMLPQVLKG 660
MTSESDSIGL TPGENSELAL SALGGCVFYL KKCLIDQELL SMCNFEEYIP LDSDVVSTAR 720
PDAIFAHQRM VLDAVTLNNL EIFLNGTNGS TEGTLLERID SCCTPFGKRL LKHWLCAPLC 780
NPYAISDRLD AIEDLMAVPE KVSEVVDLLK KLPDLERLLS KIHNVGSLLK SQNHPDSRAI 840
MYEETTYSKK MIIDFLSALE GFKVMCKIIE IMEDAVSDFK SNLLKQVITL QTKNPAARFP 900
DLTGELHRWD TAFDHDKARK TGLITPKAGF DSDYDQALAD IKENEQSLLE YLEKQRSRIG 960
CRTIVYWGIG RNRYQLEIPE SFTTRNLPEE YELKSTKKGC KRYWTKTIEK KLASLINAEE 1020
RRDVSLKDCM RRLFRNFDKN YKNWHSAVEC IAVLDVLVCL ANYSRGGDGP MCRPVILLPG 1080
EDTLPFLELK GSRHPCITKT FFGDDFIPNN ILIGCEEDEE NHKAYCVLVT GPNMGGKSTL 1140
MRQAGLLAVM AQMGCYVPAE VCRLTPIDRV FTRLGASDRI MSGESTFFVE LSETASILKH 1200
ATAHSLVLVD ELGRGTATFD GTAIANAVVK ELAETIKCRT LFSTHYHSLV EDYSQNNAVR 1260
LGHMACMVEN ECEDPSQETI TFLYKFIKGA CPKSYGFNAA RLANLPEEVV QKGHRKAREF 1320
EKMTQSLRLF REIYLATERP TVDAESLRKL LTLTKEL 1357
Nucleotide Sequence
(Fasta)		ATGTCGCGGC AGAGCACCCT GTTCAGCTTC TTCCCCAAAT CTCCGGTGCT GAGCAAGCCC 60
CCGGCCAGGG CCTCACGCGA AGGCGGTGAC GCCCGGGCAG GCACGGGGGC CTCCGCTTCC 120
CCCGGCGGGG ACGCGGCCTC GAGCGAGGCT GGTGGGCCTG GGCGCGGGCC CGCGGCGGAC 180
TCGGCGTCGC CAGCGAGAAC GAGAAGCTTC AACGGAGGAC TTCGGAGGGC AGCGGCGCCC 240
GCTGCTGCGC CTGTCAGTTG TGACTTTTCA CCTGGTGACT TGGTTTGGGC CAAGATGGAG 300
GGTTACCCCT GGTGGCCTTG TCTGGTGTAC AACCACCCCT TTGATGGAAC ATTCATCCGC 360
CAGAAGGGGA AATCGGTTCG TATCCATGTA CAGTTTTTTG ATGACACTCC AACAAGAGGC 420
TGGGTTGCCA AGAGGCTATT AAAGCCGTAC ACAGGTTCAA AATCAAAGGA CGCCCAGAAG 480
GGAGGTCATT TTTATAGTTC AAAGCCTGAA ATTCTAAGAG CAATGCAACG CGCAGATGAA 540
GCCATGAGTA AAGACAAAAA TAAGAGGCTT GAGTTGGCTG TGTGTGATGA GCCCTCAGAG 600
CCAGAAGAGG AGGAAGAGAT GGAGNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 660
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 720
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 780
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 840
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 900
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 960
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1020
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1080
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1140
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1200
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1260
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1320
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1380
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1440
NNAGTGGAAC AGGCTGACAC CCCAGAAATG ATCGAAGCAA GATTCGAAAA GATGGCACAC 1500
ATATCTAAGC ATGATAAAGT GGTCAGGAGG GAGATCTGTA GAATCATCAC CAAGGGTACA 1560
CAGACCTACA GTGTGCTGGA AGGTGATCCT TCTGAGAACC ACAGTAAGTA TCTTCTTAGT 1620
CTGAAGGAAA AAGAAGCAGA TTCTTCTGGC CACACTCGTG TGTATGGTGT GTGCTTCGTT 1680
GATGCTTCAT TGGGGAAGTT TTTCCTAGGT CAGTTTTCAG ATGATCGCCA TTGTTCCAGA 1740
TTGAGGACTC TAGTGGCACA CTACCCTCCA GTACAAGTCT TGTTTGAGAA AGGAAATCTC 1800
TCCATGGAAA CTAAGTCAGT CCTGAAGGGT TCATTATCCT CTTGTCTTCA GGAAGCGCTC 1860
ATCCCAGGCT CCCAATTTTG GGATGCAGGC AAAACTCTGA GGACTCTCCT TGAAGAAGGG 1920
TATTTTACAG AAAAGGTAAA CGTGGATAGT GGGGTGATGC TACCCCAGGT GCTTAAGGGC 1980
ATGACCTCAG AGTCTGATTC CATTGGGCTC ACACCAGGAG AGAACAGTGA GTTGGCCCTC 2040
TCTGCTCTTG GTGGTTGTGT CTTTTACCTC AAAAAATGCC TTATTGATCA GGAGCTCTTA 2100
TCAATGTGTA ATTTTGAAGA ATATATTCCT TTAGACTCTG ATGTGGTCAG TACTGCCAGA 2160
CCTGATGCTA TCTTTGCCCA TCAACGGATG GTGCTAGACG CAGTGACCTT AAACAACTTG 2220
GAGATTTTTC TGAACGGGAC AAACGGCTCT ACTGAAGGGA CCCTGTTAGA GAGGATCGAT 2280
TCTTGCTGTA CTCCCTTTGG TAAGCGGCTC CTCAAGCACT GGCTTTGTGC CCCACTCTGT 2340
AACCCTTACG CTATCAGTGA CCGTCTAGAT GCCATAGAAG ACCTCATGGC TGTGCCTGAG 2400
AAAGTCTCTG AAGTTGTAGA CCTTTTGAAG AAGCTCCCAG ATCTTGAAAG GCTGCTGAGT 2460
AAAATCCATA ATGTCGGCTC TCTTCTGAAG AGCCAGAACC ACCCTGACAG CAGGGCCATA 2520
ATGTATGAAG AAACGACTTA CAGCAAAAAG ATGATCATCG ATTTCCTTTC TGCTCTGGAA 2580
GGATTTAAAG TCATGTGTAA AATCATAGAG ATTATGGAAG ATGCTGTCAG TGACTTTAAG 2640
TCTAACCTCC TGAAGCAGGT CATTACTCTG CAGACCAAAA ATCCTGCAGC CCGCTTTCCT 2700
GACTTGACTG GAGAGCTGCA CCGGTGGGAC ACAGCTTTTG ACCACGACAA AGCACGCAAG 2760
ACTGGACTGA TTACTCCTAA AGCAGGCTTT GACAGTGACT ATGACCAAGC TCTTGCCGAC 2820
ATAAAAGAAA ATGAACAGAG CCTCCTGGAA TACTTGGAGA AGCAACGCAG TCGAATTGGT 2880
TGTAGGACTA TAGTTTACTG GGGGATCGGC AGGAATCGTT ACCAGCTGGA AATCCCAGAG 2940
AGTTTCACTA CACGAAACCT GCCAGAAGAA TATGAATTGA AATCTACCAA GAAGGGCTGT 3000
AAACGATACT GGACCAAAAC TATTGAGAAG AAGTTGGCCA GTCTGATCAA TGCTGAAGAA 3060
CGGAGAGATG TATCCCTGAA GGACTGCATG CGGCGACTCT TCCGTAACTT TGATAAAAAC 3120
TACAAGAACT GGCATTCTGC TGTAGAGTGC ATCGCCGTGT TGGATGTCTT AGTGTGCCTG 3180
GCTAATTATA GTCGAGGGGG TGATGGCCCC ATGTGCCGCC CAGTAATTCT GTTGCCAGGA 3240
GAAGACACTC TTCCCTTCTT AGAGCTCAAA GGATCACGCC ACCCCTGCAT TACCAAGACA 3300
TTTTTTGGAG ACGACTTTAT TCCTAATAAC ATTCTGATAG GCTGTGAGGA AGATGAGGAA 3360
AATCACAAAG CCTACTGTGT GCTTGTTACT GGACCAAATA TGGGCGGCAA GTCTACCCTC 3420
ATGAGACAGG CTGGCCTATT AGCTGTAATG GCCCAGATGG GTTGTTATGT ACCTGCTGAA 3480
GTGTGTAGGC TCACACCAAT TGATAGAGTG TTTACTAGAC TTGGTGCCTC AGATAGAATA 3540
ATGTCAGGTG AAAGCACATT TTTTGTTGAA CTGAGTGAGA CGGCCAGCAT TCTTAAGCAT 3600
GCAACAGCAC ATTCTCTGGT TCTTGTAGAT GAATTAGGAA GGGGTACTGC AACCTTTGAT 3660
GGGACAGCAA TAGCAAATGC AGTTGTTAAA GAACTTGCTG AAACCATTAA GTGTCGTACT 3720
TTGTTTTCTA CTCACTATCA TTCATTAGTA GAAGATTATT CTCAAAATAA CGCTGTGCGT 3780
CTAGGACATA TGGCATGCAT GGTGGAAAAT GAGTGTGAAG ACCCCAGTCA GGAGACTATT 3840
ACCTTTCTCT ATAAATTCAT TAAGGGAGCT TGTCCTAAGA GTTATGGCTT TAATGCAGCA 3900
AGGCTTGCTA ATCTTCCAGA GGAGGTCGTT CAAAAGGGAC ATAGAAAAGC AAGAGAATTT 3960
GAGAAAATGA CTCAGTCACT ACGATTATTT AGGGAAATTT ACCTGGCTAC TGAGAGGCCA 4020
ACTGTAGATG CTGAATCTCT CCGTAAGTTG CTGACTTTGA CTAAAGAATT ATAG 4075
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 91 0.0 1610
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 91 0.0 1601
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 90 0.0 1598
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 89 0.0 1598
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 90 0.0 1596
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 90 0.0 1596
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 90 0.0 1595
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 90 0.0 1590
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 90 0.0 1590
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 89 0.0 1589
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 89 0.0 1587
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 89 0.0 1586
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 89 0.0 1583
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 90 0.0 1581
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 90 0.0 1578
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 88 0.0 1578
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 89 0.0 1578
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 89 0.0 1575
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 89 0.0 1573
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 89 0.0 1573
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 88 0.0 1569
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 88 0.0 1565
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 90 0.0 1557
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 88 0.0 1551
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 86 0.0 1541
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 85 0.0 1538
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 81 0.0 1462
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 81 0.0 1455
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 89 0.0 1410
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 75 0.0 1370
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 74 0.0 1343
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 74 0.0 1335
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 75 0.0 1320
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 73 0.0 1316
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 72 0.0 1301
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 73 0.0 1293
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 69 0.0 1235
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 69 0.0 1233
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 68 0.0 1218
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 87 0.0 1216
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 68 0.0 1214
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 68 0.0 1212
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 68 0.0 1210
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 67 0.0 1200
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 67 0.0 1185
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 68 0.0 1179
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 68 0.0 1177
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 66 0.0 1073
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 60 0.0 1037
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 86 0.0 976
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 91 0.0 919
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 50 0.0 847
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 87 0.0 786
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 84 0.0 759
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 86 0.0 757
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 86 0.0 745
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 90 1e-167 588
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 91 2e-161 567
WERAM-Met-0160 AES82183 Medicago truncatula 40 5e-158 556
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 93 4e-114 410
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 59 3e-23 108
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 4e-12 72.0
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 7e-12 71.2
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 34 7e-11 67.8
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 33 1e-10 66.6
Created Date 25-Jun-2016