WERAM Information

Tag Content
WERAM ID WERAM-Xet-0147
Ensembl Protein ID ENSXETP00000049000.3
Gene Name msh6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXETG00000022635.3 ENSXETT00000049000.3 ENSXETP00000049000.3
ENSXETG00000022635.3 ENSXETT00000065397.1 ENSXETP00000059387.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 1.30e-18 67 78 139
Organism Xenopus tropicalis
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK+ g pwWP lv+++p+e ++l + + ++ + +V+FF+++++r wv++k ++p+s+
  ENSXETP00000049000.3  78 PGDLVWAKMPGHPWWPSLVYNHPKEDTHL-RGKGKSLNIHVQFFDDSPTRGWVGAKYMKPFSG 139
                           69***************************.99999*************************986 PP
Protein Sequence
(Fasta)		MSKQKTLFSF FHKSPPISSS TKSGKASSPT EADVPSSGGK KSSSSPKEGA KERGTPGRAH 60
GGKAPRSAAP SAVSDFNPGD LVWAKMPGHP WWPSLVYNHP KEDTHLRGKG KSLNIHVQFF 120
DDSPTRGWVG AKYMKPFSGS TAAEAQKGGL FFSTKPEIRK AIKMADDAMA QDKQKRLELA 180
VCMEPSDSEE DMEICPHPIY LEDEGSSASH DEAEDVKKRQ PVRESKKNGK PKRRRITIES 240
DSDNEGSDDE FKPEDSASSD EASSGVDEAK LSEPDSETEE DSPVKVPLKR KRGNPDKPTG 300
PKKRLQDELS ETPKRASNVS AEAKLKLSSF SAPESFESQT NAGGTGSVSV WDHEKFDWLQ 360
DGRRKDLKRK KQNDADYDPS TLYVPDDFLN KCTPGMRKWW QLKSQNFDTV IFYKVGKFYE 420
LYHMDAVIGV NELGLTFMKG AWAHSGFPEI AFGRFSDVLV QKGYKVARVE QTETPEMMEV 480
RCKSMSHPSK FDRVVRREIC RIITKGTQTY SVLDGNPSES HSKYLLCFKE KMDDSSGQRR 540
IYGVSFVDTS VGKFHVGQFE DDRHCSRFRT LVAHFPPIQI LFEKGNPSSD TKKVLKSCLS 600
TSIQESLQPT SQFWDAFKTL KTLAEEAYFE KDFQPGSGNL PTVLKNLTSE NDSLALTPGE 660
KSELALSALG ACIYYLKKCL IDQELLSMAN FEEYIPVDTG IEKAQASSSF FAKTSQRMVL 720
DGVTLTNLEI LQNGTNGSTE GTLLEKLDTC STPFGKRLLK QWLCAPLCNP FSINDRLNAV 780
EDLMDLPDKV SEVSDLLKKL PDLERLLSKI HSIGSPLKSQ NHPDSRAVMY EEIAYSKKKI 840
ADFLSALEGF KVMREVISIL EDAAANFKSS ILKQIVSIKG KTPQGHFPDL SAELKRWDTS 900
FDHEKARKTG VITPKVGFDP DYDEALKDIK TTEQDLNEYL DKQRKRLSCK TVVYWGTAKN 960
RYQMEIPESV TERNLPEEYE LKSTKKGYKR YWTKAIEKMF GDLANAEERR DAALKDCMRR 1020
LFYNFDKNYK EWQTAVECFA VLADVLISLS QYSQGGDGPV CRPVIVLQDN HLPFLELKGS 1080
RHPCITKTFF GDDFIPNDIL IGCKEEDSDD SSDEAHCVLV TGPNMGGKST LLRQAGLQVV 1140
MAQLGCYVPA ESCRLTPVDR VFTRLGASDR IMAGESTFFV ELSETSSILQ HATEHSLVLL 1200
DELGRGTATF DGTAIASAVV KELSQSVKCR TLFSTHYHSL VEDYSHSQAV RLGHMACMVE 1260
NECEDPSQET ITFLYKFIKG ACPKSYGFNA ARLAHIPDEI IQVGHQKARE FESITVSLRL 1320
FRELNLLLDN PSSDGQVLHN LLKVLQ 1346
Nucleotide Sequence
(Fasta)		CAGAGAGCAG TGCGGGTTGG AAGTGCTCGG TGCCTGCTGG CTGTGCTGAC TGGTGTCCCG 60
CCATGTCAAA GCAAAAGACC CTGTTCAGCT TCTTCCACAA GTCCCCCCCT ATCTCCAGCA 120
GCACCAAGTC CGGGAAAGCC TCTTCCCCAA CCGAGGCCGA TGTTCCCTCC TCTGGGGGCA 180
AGAAGTCCAG CTCTTCACCT AAAGAGGGGG CCAAGGAAAG GGGGACTCCA GGCCGGGCTC 240
ATGGAGGGAA AGCTCCCCGG TCTGCCGCAC CCAGCGCTGT CAGTGACTTC AACCCTGGAG 300
ACCTAGTTTG GGCCAAAATG CCTGGTCATC CATGGTGGCC CTCTTTGGTT TACAACCACC 360
CAAAAGAAGA CACTCATCTA AGGGGCAAGG GAAAGTCCCT TAATATCCAT GTCCAGTTTT 420
TTGATGACAG CCCTACAAGA GGATGGGTTG GAGCAAAATA TATGAAGCCT TTCTCTGGTT 480
CCACTGCTGC CGAAGCCCAA AAAGGTGGTC TTTTTTTTAG TACCAAGCCA GAAATAAGAA 540
AAGCAATAAA AATGGCAGAT GATGCCATGG CACAAGACAA GCAAAAGCGC CTTGAATTGG 600
CTGTGTGCAT GGAACCATCA GATTCGGAAG AGGATATGGA GATTTGTCCA CACCCTATAT 660
ATCTTGAAGA TGAGGGCTCT TCTGCAAGTC ACGATGAAGC AGAAGACGTA AAAAAAAGGC 720
AGCCAGTTCG GGAGAGTAAA AAGAATGGCA AACCCAAAAG AAGAAGGATT ACGATAGAGT 780
CAGACAGTGA TAATGAAGGC TCTGATGATG AATTCAAGCC AGAAGACAGT GCTAGTAGTG 840
ATGAGGCCAG TAGTGGGGTG GATGAAGCTA AACTGTCAGA ACCTGATTCT GAAACTGAAG 900
AAGATAGCCC AGTCAAGGTC CCTTTAAAGC GTAAAAGAGG GAATCCTGAC AAACCAACTG 960
GCCCAAAAAA GCGCTTGCAA GATGAACTTT CAGAAACCCC CAAAAGAGCA AGCAATGTGT 1020
CTGCAGAGGC CAAGTTAAAG TTATCTTCCT TCTCTGCTCC CGAGTCTTTC GAATCACAGA 1080
CAAATGCTGG CGGGACTGGC AGTGTTTCTG TATGGGACCA TGAAAAGTTT GATTGGCTGC 1140
AAGATGGGAG AAGGAAGGAT CTTAAACGTA AAAAGCAGAA CGATGCTGAT TACGACCCAA 1200
GCACCTTGTA TGTCCCAGAT GACTTCCTTA ATAAATGCAC TCCAGGCATG AGAAAATGGT 1260
GGCAGCTTAA ATCTCAGAAC TTTGATACGG TTATCTTTTA TAAGGTTGGC AAGTTTTATG 1320
AACTTTATCA CATGGATGCT GTCATTGGGG TCAACGAGTT GGGCCTGACA TTCATGAAAG 1380
GCGCATGGGC TCATTCTGGC TTTCCAGAGA TTGCTTTTGG ACGATTTTCC GATGTTCTCG 1440
TACAGAAAGG ATACAAAGTA GCCAGAGTGG AGCAGACGGA AACTCCAGAG ATGATGGAAG 1500
TCCGGTGCAA GTCAATGTCA CATCCAAGTA AATTTGACAG GGTTGTAAGA AGAGAAATAT 1560
GCAGGATCAT TACTAAAGGG ACTCAGACTT ACAGTGTTTT AGATGGCAAT CCGTCTGAAA 1620
GCCATAGTAA GTATCTTCTG TGCTTCAAAG AGAAAATGGA TGATTCCTCT GGTCAAAGAA 1680
GAATATATGG TGTTTCTTTT GTGGACACCT CTGTAGGGAA ATTTCACGTA GGTCAGTTTG 1740
AAGATGACCG CCATTGTTCG AGGTTTAGAA CTTTGGTAGC CCATTTCCCT CCAATTCAGA 1800
TCTTGTTTGA GAAAGGCAAC CCTTCTTCAG ATACAAAGAA AGTTTTGAAG AGCTGTCTGT 1860
CAACTTCCAT TCAGGAAAGC CTGCAGCCTA CATCTCAGTT TTGGGATGCA TTCAAAACAC 1920
TGAAAACTTT AGCTGAAGAA GCTTACTTTG AAAAAGATTT TCAACCTGGC AGTGGCAACT 1980
TGCCAACAGT TTTGAAAAAC TTGACTTCAG AAAATGACTC TTTAGCACTT ACTCCTGGCG 2040
AAAAGAGTGA ATTGGCTCTT TCAGCGCTTG GAGCATGTAT ATATTACCTT AAGAAATGTC 2100
TTATTGACCA AGAGCTGCTC TCTATGGCAA ACTTTGAAGA ATACATTCCT GTGGATACGG 2160
GCATAGAAAA AGCCCAGGCT TCAAGTAGTT TCTTTGCCAA GACGAGTCAG CGCATGGTTC 2220
TTGATGGAGT AACACTTACA AATCTGGAAA TTCTCCAGAA TGGAACAAAT GGTTCTACAG 2280
AAGGGACACT GTTAGAAAAG CTGGACACAT GCTCTACACC CTTTGGGAAG CGTCTCTTAA 2340
AACAGTGGCT GTGCGCCCCT CTTTGTAATC CCTTCTCCAT TAATGATCGT TTAAACGCAG 2400
TGGAAGATCT CATGGACCTT CCTGATAAAG TGTCTGAAGT TAGTGATCTC CTAAAGAAAC 2460
TCCCTGATCT AGAGAGGCTG CTGAGCAAAA TTCACAGTAT CGGTTCCCCA CTTAAAAGCC 2520
AGAACCATCC AGATAGCAGG GCTGTAATGT ACGAGGAAAT CGCTTACAGC AAGAAGAAGA 2580
TTGCAGATTT CTTATCTGCT CTGGAGGGGT TTAAAGTCAT GAGAGAAGTG ATCAGTATTC 2640
TGGAAGATGC TGCTGCTAAC TTTAAGTCAA GTATACTGAA ACAAATTGTA AGTATTAAAG 2700
GTAAAACTCC CCAGGGACAC TTCCCTGACC TATCGGCAGA GCTGAAGAGA TGGGATACTT 2760
CTTTTGATCA CGAGAAAGCG CGCAAGACTG GTGTGATCAC TCCTAAAGTG GGTTTTGATC 2820
CGGATTACGA TGAAGCATTG AAAGATATCA AAACCACAGA ACAAGATCTT AACGAGTATT 2880
TGGATAAACA GCGCAAACGA CTCAGCTGTA AAACTGTCGT CTACTGGGGG ACGGCCAAGA 2940
ACCGATACCA AATGGAAATT CCCGAGAGTG TTACAGAGCG TAACCTGCCG GAAGAGTATG 3000
AATTAAAATC GACAAAAAAA GGATACAAGC GCTACTGGAC TAAAGCAATT GAAAAGATGT 3060
TTGGAGACCT CGCGAACGCA GAGGAACGGC GGGATGCCGC TCTTAAAGAC TGTATGAGGA 3120
GGCTCTTCTA TAACTTTGAT AAAAACTACA AAGAATGGCA GACTGCTGTG GAATGCTTTG 3180
CGGTATTAGC AGATGTCCTC ATAAGTTTAT CTCAGTACAG CCAAGGTGGT GACGGGCCAG 3240
TCTGCAGACC GGTGATTGTG CTACAGGACA ACCATTTGCC ATTTTTGGAG CTGAAAGGTT 3300
CTCGACATCC CTGCATTACA AAAACCTTTT TTGGGGATGA TTTCATTCCA AATGACATTC 3360
TCATTGGCTG TAAGGAGGAG GACTCTGATG ACAGCAGCGA TGAAGCTCAC TGTGTGCTTG 3420
TCACAGGGCC AAACATGGGA GGAAAGTCAA CCCTTTTGAG ACAGGCAGGT CTCCAGGTTG 3480
TTATGGCACA GCTGGGATGT TACGTGCCGG CAGAGTCTTG CAGACTGACT CCCGTAGACC 3540
GGGTGTTTAC ACGACTGGGT GCATCTGACC GAATCATGGC AGGTGAAAGC ACATTTTTTG 3600
TGGAATTGAG TGAAACCTCT AGCATCCTGC AGCATGCAAC AGAACATTCC CTTGTGCTTC 3660
TGGATGAACT TGGAAGAGGC ACGGCTACCT TTGATGGTAC AGCTATAGCC AGTGCGGTTG 3720
TTAAGGAACT TTCTCAAAGT GTCAAATGCC GAACTTTATT CTCTACACAC TACCACTCTC 3780
TGGTGGAGGA TTACTCTCAC AGCCAGGCTG TACGCCTTGG GCACATGGCA TGCATGGTGG 3840
AAAATGAGTG CGAGGATCCA AGCCAGGAGA CCATCACGTT CCTTTACAAG TTCATTAAAG 3900
GAGCTTGTCC TAAAAGCTAT GGATTTAATG CTGCAAGGCT GGCTCACATT CCTGATGAAA 3960
TTATCCAGGT TGGCCACCAA AAAGCAAGAG AATTTGAAAG CATTACGGTT TCCCTCAGGC 4020
TCTTCAGAGA GCTGAATCTC TTGCTGGACA ACCCTTCCTC TGATGGCCAA GTGCTCCATA 4080
ACCTGCTGAA GGTGCTCCAA TAA 4104
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 70 0.0 1828
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 72 0.0 1806
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 71 0.0 1794
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 71 0.0 1789
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 70 0.0 1787
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 70 0.0 1738
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 65 0.0 1736
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 65 0.0 1732
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 65 0.0 1729
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 65 0.0 1729
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 65 0.0 1729
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 65 0.0 1728
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 68 0.0 1727
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 65 0.0 1727
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 65 0.0 1726
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 65 0.0 1725
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 67 0.0 1722
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 65 0.0 1721
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 65 0.0 1718
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 68 0.0 1717
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 65 0.0 1716
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 68 0.0 1713
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 68 0.0 1712
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 64 0.0 1708
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 65 0.0 1706
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 67 0.0 1704
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 65 0.0 1703
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 64 0.0 1699
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 64 0.0 1696
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 65 0.0 1696
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 65 0.0 1694
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 64 0.0 1690
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 63 0.0 1681
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 64 0.0 1679
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 64 0.0 1673
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 63 0.0 1664
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 62 0.0 1640
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 63 0.0 1640
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 63 0.0 1637
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 64 0.0 1632
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 65 0.0 1614
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 64 0.0 1609
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 63 0.0 1607
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 63 0.0 1595
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 63 0.0 1588
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 62 0.0 1523
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 56 0.0 1443
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 73 0.0 1299
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 58 0.0 1165
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 46 0.0 1123
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 73 0.0 1025
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 63 0.0 999
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 74 0.0 846
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 74 0.0 757
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 70 0.0 660
WERAM-Met-0160 AES82183 Medicago truncatula 39 0.0 655
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 71 0.0 636
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 73 2e-142 504
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 81 2e-131 468
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 66 7e-110 396
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 60 1e-20 100
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 32 2e-11 69.3
WERAM-Fia-0085 ENSFALP00000006989.1 Ficedula albicollis 33 3e-11 69.3
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 1e-10 67.0
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 31 2e-10 66.2
Created Date 25-Jun-2016