WERAM Information

Tag Content
WERAM ID WERAM-Vip-0079
Ensembl Protein ID ENSVPAP00000007177.1
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSVPAG00000007716.1 ENSVPAT00000007718.1 ENSVPAP00000007177.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 5.90e-23 80 6 67
Organism Vicugna pacos
Domain Profile
  Me_Reader PWWP
              PWWP.txt  1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63
                          +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ + +V+FF+++++r wv+r+ l py++
  ENSVPAP00000007177.1  6 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKSARIHVQFFDDSPTRGWVSRRLLRPYTG 67
                          69***************************.*******************************86 PP
Protein Sequence
(Fasta)		SCDFSPGDLV WAKMEGYPWW PCLVYNHPFD GTFIREKGKS ARIHVQFFDD SPTRGWVSRR 60
LLRPYTGSKS KEAQKGGHFY SAKPEILRAM QRADEALNKD KIKRLELAVC DEPSEPEEEE 120
EMEXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 180
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 240
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 300
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 360
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 420
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XYLLSLKKEE DSSGHTKVYG VCFVDTSLGK 480
FFIGQFSDDR HCSRFRTLVA HYPPVQVLFE KGNLSTETKM ILKGSLSSSL QESLMPGSQF 540
WDAAKTLRTL VEEGYFTDNL NEGSGVMLPQ VLKAMTSESD SIGLTPGEKS ELALSALGGC 600
VFYLKKCLID QELLSMANFE EYVPLDSDMV SATRPGAFFA KANQRMVLDA VTLNNLEIFL 660
NGTNGSTEGT LLEKIDTCHT PFGKRLLKQW LCAPLCNPYA INDRLDAIED LMIVPDKTSE 720
VADLLKKLPD LERLLSKIHN VGSPLKSQNH PDSAIMYEET TYSKKKIIDF LSALEGFKVI 780
CKIXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 840
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 900
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 960
XXXXXXXXXX VLLCLANYSQ GGDGPMCRPV ILLPEEDTPP FLDLKGSRHP CITKTFFGDD 1020
FIPNDILIGC KEEEEENGQA YCVLVTGPNM GGKSTLMRQA GLLAVMAQMG CYVPAEVCRL 1080
TPIDRVFTRL GASDRIMSGE STFFVELSET ASILTHATAH SLVLVDELGR GTATFDGTAI 1140
ANAVVKELAE NIKCRTLFST HYHSLVEDYS QNVAVRLGHM ACMVENECED PSQETITFLY 1200
KFIKGACPKS YGFNAARLAN LPEEVIRKGH RKAREFEKMT QSLRLFREVC LASSERSTVA 1260
AGTVRKLLTL IEDL 1274
Nucleotide Sequence
(Fasta)		TCTTGTGACT TCTCACCAGG TGATTTGGTT TGGGCCAAGA TGGAGGGTTA CCCCTGGTGG 60
CCTTGCCTGG TTTACAACCA CCCTTTTGAT GGAACATTCA TCCGTGAGAA AGGAAAGTCC 120
GCCCGCATTC ATGTACAGTT TTTTGATGAC AGCCCAACGA GGGGCTGGGT TAGCAGAAGA 180
TTATTAAGGC CATATACAGG TTCAAAGTCA AAGGAAGCCC AGAAAGGAGG TCATTTTTAC 240
AGTGCAAAGC CTGAAATACT CAGAGCAATG CAACGTGCAG ATGAAGCCTT GAATAAAGAC 300
AAGATTAAGA GGCTTGAATT GGCAGTCTGT GATGAGCCCT CAGAACCAGA GGAGGAAGAA 360
GAGATGGAGN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 420
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 480
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 540
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 600
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 660
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 720
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 780
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 840
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 900
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 960
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1020
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1080
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1140
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1200
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1260
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1320
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNTATCTTC TTAGCCTCAA GAAAGAGGAG 1380
GATTCTTCTG GCCACACAAA AGTGTATGGT GTATGCTTTG TTGATACTTC ACTTGGAAAG 1440
TTCTTCATAG GTCAGTTTTC AGATGACCGC CATTGTTCCA GGTTTAGGAC TCTCGTAGCA 1500
CACTATCCAC CAGTACAAGT CTTGTTTGAG AAAGGAAATC TCTCAACGGA AACTAAGATG 1560
ATTCTGAAAG GTTCGTTATC TTCTTCTCTT CAGGAAAGTC TGATGCCAGG CTCCCAGTTT 1620
TGGGATGCAG CCAAAACTTT GAGAACTCTC GTTGAAGAAG GGTATTTTAC AGACAACTTA 1680
AATGAGGGCA GTGGGGTCAT GTTACCCCAG GTGCTTAAAG CCATGACCTC AGAGTCTGAT 1740
TCTATTGGGT TGACACCAGG AGAGAAGAGT GAATTGGCCC TCTCTGCTCT CGGTGGCTGT 1800
GTCTTCTACC TCAAAAAATG CCTTATTGAT CAGGAGCTTT TATCAATGGC TAATTTTGAA 1860
GAATATGTCC CCTTGGATTC TGACATGGTC AGTGCTACAA GACCTGGTGC TTTCTTTGCT 1920
AAAGCCAATC AACGTATGGT GCTAGATGCT GTGACATTAA ACAACTTGGA GATTTTTCTG 1980
AACGGAACAA ATGGTTCTAC TGAAGGGACC CTACTAGAGA AGATTGATAC TTGCCATACT 2040
CCTTTTGGTA AGCGGCTCCT AAAACAATGG CTTTGTGCCC CACTCTGTAA CCCTTACGCT 2100
ATCAATGATC GTCTAGATGC CATAGAAGAC CTAATGATAG TGCCTGACAA AACCTCTGAG 2160
GTTGCAGACC TTCTAAAGAA GCTTCCAGAC CTTGAGAGAC TACTGAGTAA AATTCATAAT 2220
GTTGGGTCTC CCCTGAAGAG CCAGAACCAC CCTGATAGCG CTATAATGTA TGAAGAAACC 2280
ACATACAGTA AAAAAAAGAT TATTGATTTT CTTTCTGCTC TGGAAGGATT CAAAGTAATA 2340
TGTAAAATTN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2400
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2460
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2520
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2580
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2640
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2700
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2760
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2820
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2880
NNNNNNNNNN NNNNNNNNNN NNNNNNNNAT GTCTTACTGT GCCTGGCTAA CTACAGTCAA 2940
GGGGGTGATG GTCCTATGTG TCGTCCAGTA ATTCTGCTGC CAGAAGAAGA TACTCCTCCC 3000
TTCCTAGACC TTAAAGGATC ACGTCATCCC TGCATTACAA AGACTTTTTT TGGTGATGAC 3060
TTTATTCCTA ATGACATTCT AATAGGCTGT AAGGAAGAAG AGGAGGAAAA TGGCCAAGCT 3120
TATTGTGTGC TTGTTACTGG ACCAAATATG GGGGGCAAGT CTACACTCAT GAGACAGGCT 3180
GGCCTGTTAG CTGTAATGGC CCAGATGGGT TGTTATGTAC CAGCTGAAGT TTGTAGGCTC 3240
ACACCAATCG ATAGAGTGTT TACTAGACTC GGTGCCTCAG ACAGAATAAT GTCAGGTGAA 3300
AGTACATTTT TTGTTGAATT GAGTGAAACT GCCAGTATAC TTACACATGC AACAGCACAT 3360
TCTCTGGTGC TTGTGGATGA ATTAGGAAGA GGTACTGCAA CATTTGATGG GACAGCCATA 3420
GCGAATGCAG TTGTTAAGGA ACTTGCTGAG AATATAAAGT GTCGTACACT GTTTTCTACC 3480
CACTACCATT CATTAGTTGA AGACTATTCT CAAAATGTTG CAGTGCGCCT AGGACACATG 3540
GCATGCATGG TAGAAAATGA ATGTGAAGAT CCCAGCCAGG AAACTATTAC CTTTCTCTAT 3600
AAATTCATTA AAGGAGCTTG TCCTAAAAGC TACGGCTTTA ATGCAGCAAG GCTTGCTAAC 3660
CTTCCAGAGG AGGTTATTCG AAAGGGACAT AGAAAAGCAA GAGAATTTGA GAAGATGACT 3720
CAGTCACTGC GATTATTTCG GGAAGTTTGT CTGGCTAGTA GTGAAAGGTC GACTGTAGCT 3780
GCTGGAACTG TCCGTAAGTT GCTGACTTTG ATTGAGGACT TATAG 3826
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 93 8e-175 612
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 94 2e-173 607
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 93 4e-173 606
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 93 5e-173 606
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 93 1e-170 598
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 92 1e-170 598
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 91 7e-170 595
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 93 1e-169 595
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 93 1e-169 595
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 91 1e-169 595
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 94 9e-169 592
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 94 1e-168 592
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 94 1e-168 592
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 94 1e-168 591
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 94 2e-168 591
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 94 2e-168 591
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 93 7e-168 589
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 91 1e-167 588
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 95 3e-167 587
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 90 3e-167 587
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 94 4e-167 586
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 89 8e-167 585
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 92 3e-166 583
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 90 1e-165 581
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 93 2e-165 581
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 90 4e-164 577
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 89 2e-163 574
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 90 4e-163 573
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 91 2e-162 571
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 91 8e-162 569
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 88 1e-159 561
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 88 5e-159 559
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 86 2e-154 545
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 84 3e-152 537
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 84 2e-150 531
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 82 5e-146 516
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 81 4e-145 513
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 90 3e-143 507
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 80 2e-142 504
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 80 1e-141 501
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 77 2e-141 501
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 83 8e-137 486
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 81 6e-136 483
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 81 8e-136 482
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 80 1e-135 482
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 80 8e-135 479
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 79 1e-134 478
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 79 6e-133 473
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 79 3e-132 471
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 79 3e-132 471
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 78 5e-132 470
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 80 5e-132 469
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 78 5e-130 463
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 68 9e-125 446
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 88 2e-117 421
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 94 9e-114 409
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 69 6e-113 406
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 91 2e-110 398
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 61 3e-96 351
WERAM-Met-0160 AES82183 Medicago truncatula 49 1e-66 253
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 62 5e-23 108
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 48 2e-12 72.8
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 37 2e-12 72.8
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 36 5e-12 71.6
WERAM-Fia-0085 ENSFALP00000006989.1 Ficedula albicollis 37 8e-12 70.9
WERAM-Sei-0090 Si024584m Setaria italica 35 6e-06 51.6
Created Date 25-Jun-2016