WERAM Information

Tag Content
WERAM ID WERAM-Tub-0139
Ensembl Protein ID ENSTBEP00000014916.1
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTBEG00000017153.1 ENSTBET00000017161.1 ENSTBEP00000014916.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 2.80e-23 81.4 6 67
Organism Tupaia belangeri
Domain Profile
  Me_Reader PWWP
              PWWP.txt  1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63
                          +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ +++V+FF+++++r wv+++ l+py++
  ENSTBEP00000014916.1  6 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTG 67
                          69***************************.*******************************86 PP
Protein Sequence
(Fasta)		SCDFSPGDLV WAKMEGYPWW PCLVYNHPFD GTFIREKGKS VRVHVQFFDD SPTRGWVSKR 60
LLKPYTGSKS KEAQKGGHFY SAKPEILRAM QRADEALNKD KVKRLELAVC DEPSEPEEEE 120
EVEVVPTYTS DKSEENNEIE SEEEVQPKMQ GSRRSSRQIK KRRVISDSES DIGGSDVEFK 180
PDAKDEGSSD EVSSAMGDSE SEGLYSPVKV APKRKRMITG NGSLKRKSSR KEMPSATKRT 240
PGISSETKNT LSAFSSPQPL ESQVHVSGGG DESSRPTVWY HETLEWLKKE KRRDEHRRRP 300
DHPDFDASTL YVPEDFLNSR TPGMRKWWQI KSQFDVIFYK VRKFELYHMD ALIGVNELGL 360
VFMKGNWAHS GFPEIAFGRY SDSLVQKGYK VARVEQTETP EMMEARCRKM AHISKHDRVV 420
RREICRVITK GTQTYSVLEG DPSENYSKYL LSLKEKEEES SGHTRVYGVC FVDTSLGKFF 480
IGQFSDDRHC SRFRTLVAHY PPVQVLFEKG NLSMETKAVL KSSLSSSLQE GLIPGSQFWD 540
ATKTLRTLLE EGYFTEKLNE DSTVMLPQVL KNMTSESDSI GLTPGEKSEL ALSALGGCVF 600
YLKKCLIDQE LLSMANFEKY IPLDSDMVST TKSGAIFAKT NQRMVLDAVT LNNLEIFLNG 660
TNGSTEGTLL ERIDTCQTSF GKRLLKQWLC APLCSPYAIN DRLDAIEDLM VVTNKISEVT 720
DLLKKLPDLE RLLSKIHNVG SPLKSQNHPD SRAIMYEETT YSKKKIIDFL SALEGFKVIC 780
KIIGIMEEFI DDFKSKILKQ VITLKTKNPE GRFPDLTIEL NRWDTAFDHE KARKTGXXXX 840
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 900
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 960
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 1020
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 1080
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXRGT ATFDGTAIAN 1140
AVVKELAETI KCRTLFSTHY HSLVEDYSQN VAVRLGHMAC MVENECEDPS QETITFLYKF 1200
IKGACPKSYG FNAAKLANLP EEVIQKGHRK AREFEKMNRS LRLFREVCLA SERSTVDAEA 1260
VHKLLTLIKE L 1271
Nucleotide Sequence
(Fasta)		TCTTGTGACT TCTCACCAGG TGATTTGGTA TGGGCCAAGA TGGAAGGTTA TCCCTGGTGG 60
CCTTGCCTGG TTTACAACCA CCCCTTTGAT GGCACATTCA TCCGTGAGAA AGGAAAATCA 120
GTCCGTGTCC ATGTACAGTT TTTTGATGAC AGCCCAACAA GGGGCTGGGT TAGCAAAAGG 180
CTATTAAAGC CATATACAGG TTCAAAATCT AAGGAAGCCC AGAAGGGAGG TCATTTTTAC 240
AGTGCAAAGC CTGAAATACT GAGAGCAATG CAACGGGCAG ATGAAGCCTT AAATAAAGAC 300
AAGGTGAAAA GGCTTGAATT GGCAGTATGT GATGAACCTT CAGAGCCAGA AGAGGAAGAA 360
GAGGTGGAGG TAGTCCCAAC TTACACATCA GATAAGAGTG AAGAGAATAA TGAAATTGAG 420
AGTGAAGAGG AAGTACAACC TAAGATGCAA GGTTCCAGGC GAAGTAGCCG CCAAATAAAA 480
AAACGAAGGG TCATATCAGA CTCTGAGAGT GACATTGGGG GCTCTGATGT AGAATTCAAG 540
CCAGATGCAA AGGATGAAGG AAGCAGTGAT GAAGTAAGCA GCGCAATGGG GGATAGTGAG 600
AGTGAAGGCC TGTATAGCCC TGTGAAAGTT GCTCCAAAGC GGAAGAGAAT GATAACTGGA 660
AATGGCTCTC TCAAAAGGAA AAGTTCAAGG AAGGAAATGC CATCAGCCAC CAAACGAACA 720
CCTGGCATTT CATCAGAAAC TAAGAATACT TTGAGTGCTT TCTCTTCCCC CCAACCTTTG 780
GAATCCCAGG TCCATGTTAG TGGAGGAGGT GATGAGAGCA GTCGCCCTAC TGTCTGGTAT 840
CATGAAACTT TAGAATGGCT TAAGAAGGAA AAAAGAAGAG ATGAGCACAG GAGGCGGCCT 900
GATCACCCTG ATTTTGATGC ATCTACACTC TATGTGCCTG AGGATTTCCT TAATTCACGT 960
ACTCCTGGGA TGAGGAAGTG GTGGCAAATT AAGTCTCAGT TTGATGTTAT CTTTTATAAG 1020
GTGAGGAAGT TTGAACTCTA CCACATGGAT GCTCTTATTG GAGTCAATGA ACTGGGACTG 1080
GTATTCATGA AAGGTAACTG GGCCCATTCT GGTTTTCCTG AAATTGCTTT TGGCCGATAC 1140
TCAGATTCTC TGGTGCAGAA AGGCTATAAA GTAGCACGAG TGGAACAGAC TGAGACTCCA 1200
GAAATGATGG AGGCACGATG CCGAAAGATG GCACATATAT CTAAGCATGA TAGAGTAGTG 1260
AGGAGGGAGA TCTGCAGGGT CATTACCAAG GGTACACAGA CCTACAGTGT GCTAGAAGGT 1320
GACCCCTCTG AGAACTATAG TAAGTATCTT CTTAGTCTCA AAGAAAAGGA GGAAGAGTCT 1380
TCTGGTCATA CTCGTGTGTA TGGTGTGTGC TTTGTTGATA CTTCACTGGG AAAATTTTTC 1440
ATAGGTCAAT TTTCAGATGA TCGCCATTGT TCCAGATTTA GGACTCTAGT GGCCCACTAT 1500
CCTCCAGTAC AAGTGTTATT TGAGAAAGGA AACCTCTCAA TGGAAACTAA GGCAGTTCTG 1560
AAAAGTTCAT TATCCTCTTC TCTTCAGGAA GGTCTGATAC CAGGCTCCCA GTTTTGGGAT 1620
GCAACCAAAA CTTTGAGAAC TCTCCTTGAA GAAGGATATT TTACAGAAAA GCTGAATGAG 1680
GACAGTACGG TGATGTTACC CCAGGTGCTT AAAAATATGA CCTCAGAGTC TGATTCCATT 1740
GGATTGACAC CAGGAGAAAA GAGTGAATTG GCACTCTCTG CATTAGGTGG TTGTGTCTTC 1800
TACCTCAAAA AATGCCTTAT TGATCAGGAA CTTCTATCAA TGGCTAATTT TGAAAAATAT 1860
ATACCCTTGG ATTCTGATAT GGTCAGTACT ACAAAATCTG GTGCTATCTT TGCCAAAACC 1920
AACCAACGAA TGGTGCTAGA TGCAGTGACT TTAAATAACT TGGAGATTTT TCTGAATGGG 1980
ACAAATGGTT CCACTGAAGG TACCTTGCTA GAAAGGATTG ATACTTGCCA AACTTCCTTT 2040
GGTAAGAGGC TCCTAAAGCA ATGGCTTTGT GCCCCACTCT GTAGCCCTTA TGCTATCAAT 2100
GATCGTTTGG ATGCCATAGA AGACCTCATG GTTGTGACTA ACAAAATCTC TGAAGTCACA 2160
GACCTTCTAA AGAAGCTCCC AGATCTTGAG AGGCTACTGA GTAAAATTCA TAATGTTGGA 2220
TCTCCCCTGA AGAGCCAGAA CCACCCAGAT AGTAGGGCTA TAATGTATGA AGAAACTACA 2280
TATAGTAAAA AAAAGATTAT TGATTTTCTT TCTGCTCTGG AAGGATTCAA AGTAATATGT 2340
AAAATTATAG GGATTATGGA AGAATTTATC GATGATTTTA AGTCTAAAAT CCTTAAGCAG 2400
GTCATTACTC TGAAGACAAA AAATCCTGAA GGCCGTTTTC CTGATTTGAC TATAGAACTG 2460
AACCGATGGG ATACAGCCTT TGACCATGAA AAGGCTCGAA AGACTGGANN NNNNNNNNNN 2520
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2580
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2640
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2700
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2760
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2820
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2880
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2940
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3000
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3060
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3120
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3180
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3240
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3300
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3360
NNNNNNNNNN NNNNNNNNNG AAGAGGTACT GCAACATTTG ATGGGACAGC AATAGCAAAT 3420
GCAGTTGTTA AAGAACTCGC TGAAACTATA AAGTGTCGTA CATTGTTTTC TACTCACTAC 3480
CATTCATTGG TAGAAGATTA TTCTCAAAAT GTTGCTGTGC GCCTAGGACA TATGGCATGC 3540
ATGGTAGAAA ATGAATGTGA AGACCCCAGC CAAGAGACTA TTACCTTTCT CTATAAATTC 3600
ATTAAAGGGG CTTGTCCAAA GAGCTATGGC TTTAATGCAG CAAAACTTGC TAATCTTCCA 3660
GAGGAGGTCA TTCAAAAGGG ACATAGAAAA GCAAGAGAAT TTGAGAAGAT GAATCGATCT 3720
CTACGATTAT TTCGGGAAGT TTGCCTGGCT AGTGAAAGGT CGACTGTAGA TGCTGAAGCT 3780
GTCCATAAGC TGCTGACTTT GATTAAGGAA TTATAG 3817
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 92 0.0 1360
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 92 0.0 1359
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 92 0.0 1359
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 92 0.0 1357
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 91 0.0 1356
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 91 0.0 1354
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 91 0.0 1353
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 91 0.0 1348
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 91 0.0 1345
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 90 0.0 1345
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 91 0.0 1342
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 91 0.0 1342
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 90 0.0 1340
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 89 0.0 1339
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 91 0.0 1337
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 90 0.0 1335
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 90 0.0 1335
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 90 0.0 1334
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 90 0.0 1333
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 90 0.0 1332
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 89 0.0 1330
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 89 0.0 1301
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 87 0.0 1299
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 86 0.0 1269
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 87 0.0 1261
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 85 0.0 1241
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 84 0.0 1228
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 83 0.0 1222
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 77 0.0 1145
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 77 0.0 1137
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 63 0.0 966
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 65 0.0 964
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 64 0.0 964
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 66 0.0 962
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 60 0.0 917
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 90 0.0 912
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 57 0.0 839
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 67 0.0 836
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 67 0.0 816
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 66 0.0 807
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 65 0.0 749
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 62 0.0 748
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 67 0.0 741
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 63 0.0 739
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 62 0.0 738
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 63 0.0 734
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 63 0.0 725
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 63 0.0 721
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 86 0.0 717
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 61 0.0 696
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 88 0.0 642
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 78 0.0 641
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 54 2e-179 627
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 89 1e-171 602
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 90 7e-156 549
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 48 2e-147 521
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 86 2e-146 517
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 85 2e-115 414
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 92 3e-96 351
WERAM-Met-0160 AES82183 Medicago truncatula 35 1e-75 283
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 55 2e-17 89.7
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 4e-12 71.6
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 9e-12 70.9
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 32 6e-11 68.2
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 35 1e-10 67.0
WERAM-Sei-0090 Si024584m Setaria italica 35 5e-06 51.6
Created Date 25-Jun-2016