Tag |
Content |
WERAM ID |
WERAM-Ran-0140 |
Ensembl Protein ID |
ENSRNOP00000052059.4 |
Gene Name |
Hdac5 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-II |
2.20e-148 |
494.2 |
508 |
848 |
HDAC |
Class-I |
8.00e-30 |
105 |
528 |
817 |
|
Organism |
Rattus norvegicus |
Domain Profile |
HDAC Class-II
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 +g+vyd+ mlkhq++++n++ hpE+++Riq+i+srlqe+gll+k+e++++rkat++e+q+vHse h+ l++t+ +l++++l+s ENSRNOP00000052059.4 508 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTS-PLNRQKLDSkkllgp 595 79**********************************************************************9.*************** PP class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160 ++vdsd++++e++s++a+r+avG+++el++kv++gelkngfa++RPPGHHaeestamGFC+fn+va++akllqqkl ENSRNOP00000052059.4 596 isqkmyamlpcggIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKL 684 ***************************************************************************************** PP class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246 +v k+livDwD+HhGnGtq++fy+dp+vly+SlHRyd+g+ffp gsga++evg g+g+g+nvNvaw+gg+ +gd eyl+afr+vv+ ENSRNOP00000052059.4 685 SVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFP--GSGAPEEVGGGPGVGYNVNVAWTGGVdppIGDVEYLTAFRTVVM 771 *******************************************..******************************************** PP class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLl 321 pia+eF+Pd+vlvsaGfDa+eg +plgg+svta+c+++lt+ql++laggrvvl+lEGG++l+ai++a+ea+v+aLl ENSRNOP00000052059.4 772 PIAHEFSPDVVLVSAGFDAVEGhlSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 848 **********************99***************************************************98 PP
HDAC Class-I
class-1.txt 19 khpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae.............elskelkkfnvgedc.P 93 hp r++ + + + + gl k e+++ +ka+ +e++++hse y ++l +p n + ++ l ++g d+ ENSRNOP00000052059.4 528 VHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSE-YHTLLYGTSPLNRQkldskkllgpisqKMYAMLPCGGIGVDSdT 615 56777778888888888899999999999999999999998875.55666655555555344444555433222222223345666524 PP class-1.txt 94 vfdglfeyc..qlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgve 176 v +++++ + ++ G +e a k+ +e + ai G hha s a Gfc+ n + ++ l++ + +vl +d d+hhG+g + ENSRNOP00000052059.4 616 VWNEMHSSSavRMAVGCLVELAFKVAAGELKngFAIIRPPG-HHAEESTAMGFCFFNSVAITAKLLQQklSVGKVLIVDWDIHHGNGTQ 703 67777765511456788899999998877652256665555.9******************998888734567**************** PP class-1.txt 177 eafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDsla 260 +afy v+ +s+h+y++ +ffPg+G ++vg + g y vnv + g+d D +y + f++v+ ++ + f+P++v++ G D++ ENSRNOP00000052059.4 704 QAFYDDPSVLYISLHRYDNgNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDppigDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVE 792 *****************8746************************99997666669********************************8 PP class-1.txt 261 g..Drlgefnlsikghaecvkfvks 283 g +lg ++++ + +++ + + + ENSRNOP00000052059.4 793 GhlSPLGGYSVTARCFGHLTRQLMT 817 733589*****99999987665554 PP
|
Protein Sequence (Fasta) | GAIASTEVKL RLQEFLLSKS KEPTPGGLNH SLPQHPKCWG AHHASLDQSS PPQSGPPGTP 60 PSYKLPLLGP YDSRDDFPLR KTASEPNLKV RSRLKQKVAE RRSSPLLRRK DGTVISTFKK 120 RAVEITGTGP GVSSVCNSAP GSGPSSPNSS HSTIAENGFT GSVPNIPTEM LPQHRALPLD 180 SSPNQFSLYT SPSLPNISLG LQATVTVTNS HLTASPKLST QQEAERQALQ SLRQGSTLTG 240 KFMSTSSIPG CLLGVALEGD TSPHGHASLL QHVLLLEQAR QQSTLIAVPL HGQSPLVTGE 300 RVATSMRTVG KLPRHRPLSR TQSSPLPQSP QALQQLVMQQ QHQQFLEKQK QQQMQLGKIL 360 TKTGELSRQP TTHPEETEEE LTEQQEALLG EGALTMPREG STESESTQED LEEEEDEEED 420 EEDCIQVKDE DGESGPDEGA DLEESSAGYK KLFADAQQLQ PLQVYQAPLS LATVPHQALG 480 RTQSSPAAPG SMKSPTDHPT VVKHLFTTGV VYDTFMLKHQ CMCGNTHVHP EHAGRIQSIW 540 SRLQETGLLS KCERIRGRKA TLDEIQTVHS EYHTLLYGTS PLNRQKLDSK KLLGPISQKM 600 YAMLPCGGIG VDSDTVWNEM HSSSAVRMAV GCLVELAFKV AAGELKNGFA IIRPPGHHAE 660 ESTAMGFCFF NSVAITAKLL QQKLSVGKVL IVDWDIHHGN GTQQAFYDDP SVLYISLHRY 720 DNGNFFPGSG APEEVGGGPG VGYNVNVAWT GGVDPPIGDV EYLTAFRTVV MPIAHEFSPD 780 VVLVSAGFDA VEGHLSPLGG YSVTARCFGH LTRQLMTLAG GRVVLALEGG HDLTAICDAS 840 EACVSALLSV ELQPLDEAVL QQKPSINAVA TLEKVIEIQS KHWSCVQRFA TGLGCSLREA 900 QTGEKEEAET VSAMALLSMG AEQAQAAATQ EHSPRPAEEP MEQEPAL 947Protein Fasta Sequence
>ENSRNOP00000052059.4|Class-I|Rattus norvegicus GAIASTEVKLRLQEFLLSKSKEPTPGGLNHSLPQHPKCWGAHHASLDQSSPPQSGPPGTPPSYKLPLLGPYDSRDDFPLRKTASEPNLKVRSRLKQKVAERRSSPLLRRKDGTVISTFKKRAVEITGTGPGVSSVCNSAPGSGPSSPNSSHSTIAENGFTGSVPNIPTEMLPQHRALPLDSSPNQFSLYTSPSLPNISLGLQATVTVTNSHLTASPKLSTQQEAERQALQSLRQGSTLTGKFMSTSSIPGCLLGVALEGDTSPHGHASLLQHVLLLEQARQQSTLIAVPLHGQSPLVTGERVATSMRTVGKLPRHRPLSRTQSSPLPQSPQALQQLVMQQQHQQFLEKQKQQQMQLGKILTKTGELSRQPTTHPEETEEELTEQQEALLGEGALTMPREGSTESESTQEDLEEEEDEEEDEEDCIQVKDEDGESGPDEGADLEESSAGYKKLFADAQQLQPLQVYQAPLSLATVPHQALGRTQSSPAAPGSMKSPTDHPTVVKHLFTTGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTSPLNRQKLDSKKLLGPISQKMYAMLPCGGIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITAKLLQQKLSVGKVLIVDWDIHHGNGTQQAFYDDPSVLYISLHRYDNGNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDPPIGDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAVEGHLSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALLSVELQPLDEAVLQQKPSINAVATLEKVIEIQSKHWSCVQRFATGLGCSLREAQTGEKEEAETVSAMALLSMGAEQAQAAATQEHSPRPAEEPMEQEPAL
|
Nucleotide Sequence (Fasta) | GGTGCCATCG CCAGCACCGA GGTAAAGCTG AGGCTCCAGG AATTCCTGTT GTCCAAGTCA 60 AAGGAGCCCA CACCAGGCGG CCTCAACCAT TCCCTCCCAC AGCACCCCAA ATGCTGGGGA 120 GCCCATCATG CTTCTTTGGA CCAGAGTTCC CCTCCCCAGA GCGGCCCTCC TGGGACGCCT 180 CCCTCCTACA AATTGCCTTT GCTTGGGCCC TATGACAGCC GTGATGACTT TCCCCTCCGT 240 AAAACGGCCT CGGAACCCAA CTTAAAAGTA CGTTCAAGGC TAAAACAGAA GGTAGCTGAG 300 AGAAGAAGCA GTCCCCTCCT GCGTCGAAAG GATGGCACTG TTATTAGTAC TTTTAAGAAG 360 AGAGCAGTCG AGATCACAGG CACAGGGCCT GGGGTGTCGT CCGTGTGTAA CAGTGCGCCT 420 GGCTCTGGCC CCAGCTCTCC CAACAGTTCC CACAGCACCA TCGCTGAGAA CGGCTTTACT 480 GGCTCAGTCC CCAACATCCC CACTGAGATG CTCCCCCAGC ACCGGGCCCT CCCTCTGGAC 540 AGTTCCCCAA ACCAGTTCAG CCTCTACACG TCTCCTTCTC TGCCTAACAT CTCCCTAGGG 600 CTGCAGGCCA CTGTCACTGT TACCAACTCG CACCTCACCG CCTCCCCGAA GCTGTCGACA 660 CAGCAGGAGG CTGAGAGGCA GGCCCTTCAG TCCCTGCGGC AGGGCAGCAC ACTGACCGGC 720 AAGTTCATGA GCACATCCTC CATCCCTGGC TGCCTGCTGG GAGTGGCCCT GGAGGGCGAC 780 ACGAGCCCCC ATGGGCACGC TTCCCTGCTG CAGCACGTTT TGCTGCTGGA GCAGGCCCGG 840 CAACAGAGCA CGCTCATAGC GGTGCCACTC CATGGGCAGT CCCCACTGGT GACGGGTGAA 900 CGTGTGGCCA CCAGCATGAG GACAGTGGGC AAGCTCCCAA GGCACCGACC TCTGAGCCGT 960 ACTCAGTCCT CGCCCCTGCC GCAGAGTCCC CAGGCCCTGC AGCAGCTGGT TATGCAGCAG 1020 CAGCACCAGC AGTTCCTAGA GAAACAGAAG CAGCAGCAGA TGCAGCTGGG CAAGATCCTT 1080 ACCAAAACTG GGGAGCTGTC AAGGCAGCCC ACCACCCACC CTGAAGAGAC AGAGGAGGAG 1140 CTGACGGAAC AGCAGGAGGC CTTGCTGGGG GAGGGGGCCC TGACCATGCC CCGGGAAGGT 1200 TCTACAGAGA GCGAGAGCAC CCAGGAAGAT CTAGAAGAGG AAGAGGATGA GGAGGAGGAC 1260 GAGGAGGACT GCATTCAGGT CAAGGATGAG GATGGCGAGA GTGGTCCTGA TGAGGGCGCA 1320 GACTTGGAGG AGTCCAGTGC TGGTTACAAA AAGTTGTTCG CAGATGCCCA GCAGTTACAG 1380 CCCCTCCAGG TATACCAGGC ACCCCTCAGC CTGGCCACTG TGCCTCATCA GGCCCTGGGC 1440 CGCACCCAGT CCTCACCTGC TGCTCCTGGG AGCATGAAGA GCCCCACAGA CCACCCCACT 1500 GTGGTGAAGC ACCTCTTCAC CACAGGTGTG GTCTATGACA CGTTCATGCT GAAGCATCAG 1560 TGTATGTGCG GAAACACACA TGTGCACCCA GAGCACGCCG GCCGCATCCA GAGCATCTGG 1620 TCCCGGCTGC AGGAAACTGG TCTGCTCAGC AAGTGTGAGC GGATCCGGGG TCGTAAAGCC 1680 ACACTGGATG AAATCCAGAC CGTGCACTCT GAGTACCACA CCCTGCTCTA TGGGACCAGT 1740 CCCCTTAACC GGCAGAAGCT GGACAGTAAG AAGCTGCTTG GCCCCATCAG CCAGAAGATG 1800 TACGCCATGC TGCCTTGTGG GGGCATTGGG GTGGACAGTG ACACTGTGTG GAATGAGATG 1860 CACTCCTCTA GTGCCGTGCG AATGGCAGTG GGCTGCCTGG TGGAGCTGGC CTTCAAGGTG 1920 GCTGCAGGAG AGCTCAAGAA TGGATTTGCC ATCATCCGAC CCCCAGGACA TCATGCTGAG 1980 GAGTCCACAG CCATGGGATT CTGCTTCTTC AACTCCGTAG CCATCACAGC TAAACTCCTG 2040 CAGCAGAAGC TGAGCGTGGG CAAGGTCCTC ATCGTGGACT GGGACATTCA CCACGGCAAT 2100 GGCACCCAGC AAGCATTTTA CGATGACCCC TCCGTGCTCT ACATCTCTTT GCATCGCTAC 2160 GACAATGGGA ACTTCTTTCC AGGCTCCGGG GCTCCTGAAG AGGTTGGTGG AGGGCCAGGT 2220 GTGGGGTACA ACGTAAATGT GGCGTGGACA GGAGGTGTGG ATCCCCCCAT TGGAGATGTG 2280 GAATACCTGA CAGCCTTCAG GACAGTAGTG ATGCCCATTG CCCACGAGTT CTCACCCGAC 2340 GTCGTTCTAG TCTCCGCTGG GTTTGATGCT GTTGAAGGAC ATCTGTCTCC ACTGGGTGGC 2400 TATTCTGTCA CCGCCAGATG TTTTGGCCAC TTGACCAGGC AGCTCATGAC ACTGGCAGGG 2460 GGCCGGGTGG TGCTGGCCCT GGAGGGAGGT CATGACTTGA CCGCCATCTG TGATGCTTCT 2520 GAGGCCTGTG TCTCGGCTCT GCTCAGCGTG GAGCTGCAGC CCTTGGATGA AGCAGTCTTG 2580 CAGCAAAAGC CCAGCATCAA TGCAGTTGCC ACACTAGAGA AAGTCATCGA GATCCAGAGC 2640 AAACACTGGA GCTGTGTACA GAGGTTTGCC ACTGGTCTGG GCTGCTCGCT GCGGGAGGCT 2700 CAGACGGGTG AGAAAGAGGA GGCCGAGACT GTGAGCGCCA TGGCCCTGCT TTCCATGGGG 2760 GCTGAGCAGG CCCAGGCTGC TGCCACTCAA GAGCACAGCC CCCGGCCAGC CGAGGAGCCC 2820 ATGGAGCAGG AGCCTGCCCT GTGACACCCA GGCCCCCCTC CCTCTGGGCT TCATCATTGT 2880 GATTTTGTTT ATTTTTTCTA TTAAAAACGA AAAGTCACAC ATTCAACAGC G
2932Nucleotide Fasta Sequence
>ENSRNOP00000052059.4|Class-I|Rattus norvegicus GGTGCCATCGCCAGCACCGAGGTAAAGCTGAGGCTCCAGGAATTCCTGTTGTCCAAGTCAAAGGAGCCCACACCAGGCGGCCTCAACCATTCCCTCCCACAGCACCCCAAATGCTGGGGAGCCCATCATGCTTCTTTGGACCAGAGTTCCCCTCCCCAGAGCGGCCCTCCTGGGACGCCTCCCTCCTACAAATTGCCTTTGCTTGGGCCCTATGACAGCCGTGATGACTTTCCCCTCCGTAAAACGGCCTCGGAACCCAACTTAAAAGTACGTTCAAGGCTAAAACAGAAGGTAGCTGAGAGAAGAAGCAGTCCCCTCCTGCGTCGAAAGGATGGCACTGTTATTAGTACTTTTAAGAAGAGAGCAGTCGAGATCACAGGCACAGGGCCTGGGGTGTCGTCCGTGTGTAACAGTGCGCCTGGCTCTGGCCCCAGCTCTCCCAACAGTTCCCACAGCACCATCGCTGAGAACGGCTTTACTGGCTCAGTCCCCAACATCCCCACTGAGATGCTCCCCCAGCACCGGGCCCTCCCTCTGGACAGTTCCCCAAACCAGTTCAGCCTCTACACGTCTCCTTCTCTGCCTAACATCTCCCTAGGGCTGCAGGCCACTGTCACTGTTACCAACTCGCACCTCACCGCCTCCCCGAAGCTGTCGACACAGCAGGAGGCTGAGAGGCAGGCCCTTCAGTCCCTGCGGCAGGGCAGCACACTGACCGGCAAGTTCATGAGCACATCCTCCATCCCTGGCTGCCTGCTGGGAGTGGCCCTGGAGGGCGACACGAGCCCCCATGGGCACGCTTCCCTGCTGCAGCACGTTTTGCTGCTGGAGCAGGCCCGGCAACAGAGCACGCTCATAGCGGTGCCACTCCATGGGCAGTCCCCACTGGTGACGGGTGAACGTGTGGCCACCAGCATGAGGACAGTGGGCAAGCTCCCAAGGCACCGACCTCTGAGCCGTACTCAGTCCTCGCCCCTGCCGCAGAGTCCCCAGGCCCTGCAGCAGCTGGTTATGCAGCAGCAGCACCAGCAGTTCCTAGAGAAACAGAAGCAGCAGCAGATGCAGCTGGGCAAGATCCTTACCAAAACTGGGGAGCTGTCAAGGCAGCCCACCACCCACCCTGAAGAGACAGAGGAGGAGCTGACGGAACAGCAGGAGGCCTTGCTGGGGGAGGGGGCCCTGACCATGCCCCGGGAAGGTTCTACAGAGAGCGAGAGCACCCAGGAAGATCTAGAAGAGGAAGAGGATGAGGAGGAGGACGAGGAGGACTGCATTCAGGTCAAGGATGAGGATGGCGAGAGTGGTCCTGATGAGGGCGCAGACTTGGAGGAGTCCAGTGCTGGTTACAAAAAGTTGTTCGCAGATGCCCAGCAGTTACAGCCCCTCCAGGTATACCAGGCACCCCTCAGCCTGGCCACTGTGCCTCATCAGGCCCTGGGCCGCACCCAGTCCTCACCTGCTGCTCCTGGGAGCATGAAGAGCCCCACAGACCACCCCACTGTGGTGAAGCACCTCTTCACCACAGGTGTGGTCTATGACACGTTCATGCTGAAGCATCAGTGTATGTGCGGAAACACACATGTGCACCCAGAGCACGCCGGCCGCATCCAGAGCATCTGGTCCCGGCTGCAGGAAACTGGTCTGCTCAGCAAGTGTGAGCGGATCCGGGGTCGTAAAGCCACACTGGATGAAATCCAGACCGTGCACTCTGAGTACCACACCCTGCTCTATGGGACCAGTCCCCTTAACCGGCAGAAGCTGGACAGTAAGAAGCTGCTTGGCCCCATCAGCCAGAAGATGTACGCCATGCTGCCTTGTGGGGGCATTGGGGTGGACAGTGACACTGTGTGGAATGAGATGCACTCCTCTAGTGCCGTGCGAATGGCAGTGGGCTGCCTGGTGGAGCTGGCCTTCAAGGTGGCTGCAGGAGAGCTCAAGAATGGATTTGCCATCATCCGACCCCCAGGACATCATGCTGAGGAGTCCACAGCCATGGGATTCTGCTTCTTCAACTCCGTAGCCATCACAGCTAAACTCCTGCAGCAGAAGCTGAGCGTGGGCAAGGTCCTCATCGTGGACTGGGACATTCACCACGGCAATGGCACCCAGCAAGCATTTTACGATGACCCCTCCGTGCTCTACATCTCTTTGCATCGCTACGACAATGGGAACTTCTTTCCAGGCTCCGGGGCTCCTGAAGAGGTTGGTGGAGGGCCAGGTGTGGGGTACAACGTAAATGTGGCGTGGACAGGAGGTGTGGATCCCCCCATTGGAGATGTGGAATACCTGACAGCCTTCAGGACAGTAGTGATGCCCATTGCCCACGAGTTCTCACCCGACGTCGTTCTAGTCTCCGCTGGGTTTGATGCTGTTGAAGGACATCTGTCTCCACTGGGTGGCTATTCTGTCACCGCCAGATGTTTTGGCCACTTGACCAGGCAGCTCATGACACTGGCAGGGGGCCGGGTGGTGCTGGCCCTGGAGGGAGGTCATGACTTGACCGCCATCTGTGATGCTTCTGAGGCCTGTGTCTCGGCTCTGCTCAGCGTGGAGCTGCAGCCCTTGGATGAAGCAGTCTTGCAGCAAAAGCCCAGCATCAATGCAGTTGCCACACTAGAGAAAGTCATCGAGATCCAGAGCAAACACTGGAGCTGTGTACAGAGGTTTGCCACTGGTCTGGGCTGCTCGCTGCGGGAGGCTCAGACGGGTGAGAAAGAGGAGGCCGAGACTGTGAGCGCCATGGCCCTGCTTTCCATGGGGGCTGAGCAGGCCCAGGCTGCTGCCACTCAAGAGCACAGCCCCCGGCCAGCCGAGGAGCCCATGGAGCAGGAGCCTGCCCTGTGACACCCAGGCCCCCCTCCCTCTGGGCTTCATCATTGTGATTTTGTTTATTTTTTCTATTAAAAACGAAAAGTCACACATTCAACAGCG
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |