WERAM Information

Tag Content
WERAM ID WERAM-Ran-0105
Ensembl Protein ID ENSRNOP00000021923.6
Gene Name Msh6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSRNOG00000016134.7 ENSRNOT00000021923.7 ENSRNOP00000021923.6
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 6.20e-23 81.2 91 152
Organism Rattus norvegicus
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ +++V+FF+++++r wv++++l+py++
  ENSRNOP00000021923.6  91 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-RKNGKSARVHVQFFDDSPTRGWVSKRMLKPYTG 152
                           69***************************.99999**************************86 PP
Protein Sequence
(Fasta)		MSRQSTLYSF FPKSPALGDT KEAAARASRK GAAASGASAS RGRDAAWSEA GPGSRPAALS 60
TSLPEAKDLN GGLRRSAAPA VPASSSCDFS PGDLVWAKME GYPWWPCLVY NHPFDGTFIR 120
KNGKSARVHV QFFDDSPTRG WVSKRMLKPY TGSKSKEAQK GGHFYSSKSE ILRAMQRADE 180
ALSKDKAQRL ELAVCDEPSE PEEEEEEEEE ETQVHGAYLS DKSEEENQDE SEEETQPNAQ 240
GPRRSSRQVK KRRVISDSES DIGGSDVEFK PDSKQEGSSD EVSSGVGDSD SEGLGSFGKG 300
APKRKRTVAA HGGLKRKSLK KETGSAKQAT RILSETKSTL SAFCAPQNSE SQTHVCGGGN 360
DSSGPTIWYH ETLEWLKPEK RRDENRRRPD HPDYNSSTLY VPEDFLNSCT PGMRRWWQFK 420
SQNFDLVIFY KVGKFYELYH MDAVIGVSEL GLIFMKGNWA HSGFPEIAFG RFSDSLVQKG 480
YKVARVEQTE TPEMMEARCR KMAHVSKFDR VVRREICRII TKGTQTYSVL DGDPSENYSR 540
YLLSLKEKEE DSSGHMRAYG VCFVDTSLGK FFLGQFSDDR HCSRLRTLVA HYPPVQILFE 600
KGNLSTETKT VLKGYWSSCL QEGLIPGSQF WDATKTLRTL LEGGYFTGNE GSGAELPPVL 660
KAMTSESDSV GLTPGEESEL SLSALGGCVF YLKKCLIDQE LLSMANFEEY FPLDSDMVGT 720
VKPGAVFTKA SQRMVLDAVT LSNLEIFLNG TNGSTEGTLL ERLDTCHTPF GKRLLKQWLC 780
APLCSPSAIS DRLDAIEDLM AVPDKVAEVA DLLKKLPDLE RLLSKIHNVG SPLKSQNHPD 840
TRAIMYEETT YSKKKIIDFL SALEGFKVMC KITRLMEDVA DGFKSKTLKQ VVTLQTKSPK 900
GRFPDLTAEL NRWDTAFDHE KARKTGLITP KAGFDSDYDQ ALADIRENEQ SLLEYLDKQR 960
SRIGCRNIVY WGIGRNRYQL EIPENFATRN LPEEYELKST KKGCKRYWTK VIEKKLSNLI 1020
NAEERRDASL KDCMRRLFYN FDKNHKDWQS AVECTAVLDV LLCLASYSQG GDGPMCRPVL 1080
LLPGEDTHPF LELKGSRHPC ITKTFFGDDF IPNDILIGCE EDAEADGKAY CVLVTGPNMG 1140
GKSTLIRQAG LLAVMAQMGC YVPAELCRLT PVDRVFTRLG ASDRIMSGES TFFVELSETA 1200
SILRHATAHS LVLVDELGRG TATFDGTAIA SAVVKELAET IKCRTLFSTH YHSLVEDYSK 1260
NVCVRLGHMA CMVENECEDP SQETITFLYK FIKGACPKSY GFNAARLANL PEEVIQKGHR 1320
KAREFERMNQ ALQLFREVCL ASERPTVNSE AIHRLLALVN QL 1362
Nucleotide Sequence
(Fasta)		CGGACGCGCC TCCTCCCGGC TTTCCCGCCA GCAGTGGCCG CGCGGCGGAT GCCGTCCCTG 60
TAGGCGCTCG GAGTGGTGGA CCATTCGGCC CGTCAGCCTT CATCATGTCG CGACAAAGCA 120
CCCTATACAG CTTCTTCCCC AAGTCCCCGG CGCTCGGCGA CACCAAGGAG GCCGCGGCCC 180
GGGCCTCACG CAAAGGTGCC GCCGCCTCCG GAGCCTCCGC TTCCCGGGGC CGGGATGCGG 240
CCTGGAGCGA GGCTGGACCT GGGTCCCGGC CCGCAGCGTT ATCCACCTCG TTGCCGGAGG 300
CAAAGGACCT TAACGGAGGG CTGCGGAGGT CGGCCGCGCC CGCGGTCCCC GCCAGTAGTT 360
CTTGTGACTT CTCCCCAGGT GATCTGGTTT GGGCTAAGAT GGAAGGTTAT CCTTGGTGGC 420
CTTGCCTGGT TTACAATCAT CCCTTTGATG GGACATTCAT CCGCAAGAAC GGGAAATCAG 480
CCCGTGTTCA CGTACAGTTT TTTGATGACA GTCCAACAAG GGGCTGGGTT AGCAAAAGGA 540
TGTTAAAACC ATATACAGGT TCAAAGTCAA AGGAAGCCCA AAAGGGAGGT CATTTCTACA 600
GCTCAAAGTC CGAAATACTC AGAGCAATGC AGCGTGCAGA CGAAGCCTTA AGTAAAGACA 660
AGGCTCAGAG GCTTGAGCTG GCAGTCTGTG ATGAGCCTTC AGAGCCGGAG GAGGAGGAGG 720
AGGAGGAGGA GGAGGAGACA CAGGTGCATG GGGCCTATTT ATCTGATAAG AGTGAAGAGG 780
AAAATCAGGA CGAGAGTGAA GAAGAAACAC AGCCAAACGC TCAGGGGCCT AGGCGAAGTA 840
GCCGGCAAGT CAAAAAGCGA AGGGTCATCT CAGACTCTGA GAGCGACATT GGCGGCTCTG 900
ATGTAGAATT CAAGCCAGAC AGTAAGCAAG AAGGCAGCAG TGACGAAGTG AGCAGTGGGG 960
TTGGAGACAG CGATAGCGAA GGCCTGGGCA GCTTTGGCAA AGGCGCTCCA AAGCGGAAGA 1020
GAACAGTGGC AGCTCATGGT GGACTTAAAA GGAAAAGTCT GAAGAAGGAA ACAGGCTCAG 1080
CCAAACAAGC AACTCGCATT CTGTCAGAAA CCAAGAGTAC CTTGAGTGCT TTCTGTGCCC 1140
CGCAGAATTC TGAGTCCCAA ACCCATGTCT GTGGAGGAGG TAACGACAGC AGTGGACCCA 1200
CTATCTGGTA TCATGAGACT TTAGAATGGC TTAAGCCAGA GAAGAGAAGA GATGAGAACA 1260
GGAGACGGCC AGATCACCCA GACTACAACT CCTCCACACT GTATGTGCCT GAAGACTTCC 1320
TCAACTCTTG CACCCCGGGG ATGAGGCGGT GGTGGCAGTT CAAGTCTCAG AACTTTGACC 1380
TTGTCATCTT CTACAAAGTG GGCAAGTTTT ATGAGTTGTA TCACATGGAC GCTGTCATTG 1440
GTGTCAGTGA GCTGGGACTG ATATTCATGA AGGGCAACTG GGCCCACTCT GGTTTTCCAG 1500
AGATCGCATT TGGCCGATTC TCGGATTCCT TGGTGCAGAA GGGCTATAAG GTGGCCCGAG 1560
TGGAACAGAC TGAGACCCCA GAGATGATGG AGGCACGGTG CCGGAAAATG GCGCATGTGT 1620
CTAAGTTTGA TAGAGTGGTG AGAAGGGAGA TTTGTAGGAT CATTACCAAG GGCACACAGA 1680
CCTATAGTGT GCTGGATGGT GATCCCTCCG AGAACTACAG TAGGTATCTT CTGAGCCTCA 1740
AAGAGAAAGA GGAAGATTCT TCTGGTCACA TGCGTGCATA TGGTGTGTGC TTTGTTGATA 1800
CTTCACTGGG CAAGTTTTTC CTGGGCCAGT TTTCAGATGA TCGCCACTGT TCCAGACTTA 1860
GGACTCTAGT GGCACACTAT CCTCCAGTAC AGATTTTGTT TGAGAAAGGA AATCTCTCAA 1920
CAGAAACCAA AACAGTCCTG AAGGGTTACT GGTCATCTTG CCTTCAGGAA GGCCTGATTC 1980
CAGGTTCCCA ATTTTGGGAT GCCACTAAGA CTTTGCGAAC ACTCCTGGAG GGAGGGTATT 2040
TTACTGGAAA TGAAGGCAGT GGTGCAGAGC TGCCCCCGGT GCTTAAAGCT ATGACGTCAG 2100
AGTCAGATTC TGTTGGGCTG ACACCAGGAG AGGAGAGTGA GTTATCTCTG TCTGCTCTAG 2160
GTGGTTGTGT TTTCTACCTC AAAAAATGCC TGATTGATCA GGAGCTTCTG TCAATGGCTA 2220
ATTTTGAAGA GTATTTTCCC TTGGATTCTG ACATGGTTGG CACAGTAAAA CCTGGTGCTG 2280
TCTTTACTAA AGCCAGTCAG CGAATGGTGC TAGATGCGGT GACATTAAGC AACCTGGAGA 2340
TTTTCCTGAA TGGGACAAAT GGCTCTACTG AAGGGACTCT GCTAGAGAGG CTGGATACCT 2400
GCCATACCCC TTTTGGCAAG CGACTCTTAA AACAGTGGCT TTGTGCCCCC CTCTGTAGTC 2460
CTTCTGCTAT CAGTGACCGT CTAGATGCCA TTGAAGACCT GATGGCTGTG CCTGACAAAG 2520
TCGCCGAAGT TGCAGACCTC CTGAAGAAGC TGCCAGATCT TGAGAGGCTA CTGAGTAAGA 2580
TTCATAATGT TGGGTCTCCC CTAAAGAGCC AGAACCATCC AGATACTAGG GCTATAATGT 2640
ACGAAGAAAC GACATACAGC AAAAAAAAGA TCATCGATTT TCTTTCTGCT CTAGAAGGAT 2700
TCAAAGTAAT GTGTAAAATT ACAAGGCTCA TGGAGGATGT CGCTGATGGG TTTAAGTCTA 2760
AAACCCTGAA GCAGGTTGTG ACTCTGCAAA CAAAAAGTCC TAAAGGCCGT TTTCCTGATC 2820
TGACCGCAGA ACTGAACCGA TGGGATACAG CTTTTGACCA TGAGAAGGCT CGAAAGACTG 2880
GACTCATTAC CCCAAAAGCA GGGTTTGACT CAGATTATGA CCAAGCACTT GCTGACATAA 2940
GAGAGAATGA ACAGAGCCTC TTGGAGTACT TAGACAAACA GCGGAGTCGG ATCGGCTGTA 3000
GAAACATAGT CTACTGGGGA ATTGGTAGGA ACCGTTACCA GTTAGAGATT CCAGAGAATT 3060
TTGCTACCCG AAATCTACCT GAAGAATATG AGTTGAAGTC TACCAAAAAG GGCTGTAAAC 3120
GATACTGGAC CAAAGTGATT GAGAAGAAAC TGTCTAATCT TATAAACGCT GAGGAACGCA 3180
GGGACGCATC TTTAAAGGAC TGCATGCGGC GTCTGTTCTA TAACTTTGAC AAGAATCACA 3240
AGGACTGGCA GTCTGCTGTG GAGTGCACTG CAGTGCTGGA TGTCTTACTG TGCCTGGCTA 3300
GCTATAGCCA AGGAGGAGAT GGCCCGATGT GTCGCCCAGT ACTTCTGTTA CCAGGAGAAG 3360
ACACACATCC CTTCTTAGAG CTTAAAGGCT CACGGCATCC CTGCATTACA AAGACTTTCT 3420
TTGGAGATGA TTTTATTCCT AATGACATTC TGATCGGCTG TGAGGAAGAC GCAGAGGCGG 3480
ACGGCAAAGC CTATTGTGTG CTTGTTACTG GGCCAAATAT GGGGGGCAAA TCTACACTCA 3540
TAAGACAGGC TGGTCTGTTA GCTGTGATGG CCCAGATGGG TTGTTATGTA CCTGCCGAGC 3600
TGTGTAGGCT CACACCAGTG GATAGAGTGT TTACTCGACT TGGTGCCTCC GATAGAATCA 3660
TGTCAGGGGA AAGTACATTT TTTGTTGAGT TGAGCGAAAC TGCTAGCATA CTCAGGCATG 3720
CGACAGCACA CTCTCTGGTA CTTGTGGATG AATTAGGAAG AGGGACTGCA ACTTTTGATG 3780
GGACAGCAAT AGCCAGTGCG GTTGTTAAAG AACTCGCTGA AACCATAAAG TGTCGAACAC 3840
TGTTTTCTAC ACACTATCAT TCATTAGTAG AGGATTATTC TAAAAATGTT TGTGTGCGCC 3900
TAGGACATAT GGCATGCATG GTGGAAAATG AATGTGAGGA TCCCAGCCAG GAGACCATTA 3960
CTTTCCTCTA TAAATTCATT AAGGGAGCTT GTCCTAAGAG CTATGGCTTT AATGCAGCAA 4020
GGCTTGCTAA TCTTCCAGAG GAAGTTATTC AGAAGGGACA CAGAAAAGCA AGAGAATTTG 4080
AGAGGATGAA TCAGGCATTA CAACTATTTC GGGAAGTTTG TCTGGCTAGT GAAAGGCCGA 4140
CTGTAAACAG TGAAGCTATC CATAGGTTGC TGGCTTTGGT TAACCAATTG TAGACTACAT 4200
TGGAAGCTGA GTTGACTTTT GAAAAAGGTG GTAAATTCAG ACAACATTAT GATCTAATAA 4260
ACTTTATTTT TTAAAAATGA CCATTTTTCC ATTTTCTTTC TAGGAAATTA AACCCTTTTA 4320
ATTCTTATCT ACCTTCTACA TAATGGTTAT TGAATACTCC ACAATATATT AAGTCTAGAT 4380
GTTATGGTAC 4391
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 91 0.0 2344
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 85 0.0 2216
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 86 0.0 2214
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 86 0.0 2212
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 86 0.0 2204
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 87 0.0 2192
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 85 0.0 2192
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 85 0.0 2190
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 85 0.0 2186
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 84 0.0 2168
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 84 0.0 2167
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 84 0.0 2166
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 84 0.0 2159
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 83 0.0 2152
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 83 0.0 2151
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 84 0.0 2147
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 83 0.0 2145
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 86 0.0 2144
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 83 0.0 2140
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 83 0.0 2138
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 84 0.0 2135
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 83 0.0 2126
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 83 0.0 2115
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 86 0.0 2099
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 86 0.0 2085
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 84 0.0 1994
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 74 0.0 1920
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 77 0.0 1919
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 68 0.0 1722
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 69 0.0 1691
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 73 0.0 1600
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 72 0.0 1567
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 72 0.0 1562
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 72 0.0 1538
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 86 0.0 1538
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 72 0.0 1535
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 79 0.0 1514
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 68 0.0 1473
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 70 0.0 1467
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 68 0.0 1467
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 68 0.0 1461
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 68 0.0 1451
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 68 0.0 1448
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 67 0.0 1437
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 67 0.0 1412
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 68 0.0 1411
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 67 0.0 1380
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 67 0.0 1320
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 83 0.0 1255
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 61 0.0 1248
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 88 0.0 1243
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 51 0.0 1018
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 85 0.0 957
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 88 0.0 922
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 87 0.0 796
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 85 0.0 751
WERAM-Met-0160 AES82183 Medicago truncatula 42 0.0 682
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 88 3e-168 590
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 88 5e-159 560
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 82 2e-146 518
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 53 4e-25 115
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 34 6e-13 74.7
WERAM-Fia-0085 ENSFALP00000006989.1 Ficedula albicollis 34 1e-12 73.6
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 33 1e-12 73.6
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 5e-12 71.6
WERAM-Sei-0090 Si024584m Setaria italica 35 2e-06 53.1
Created Date 25-Jun-2016