WERAM Information

Tag Content
WERAM ID WERAM-Ptv-0116
Ensembl Protein ID ENSPVAP00000010278.1
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPVAG00000010906.1 ENSPVAT00000010906.1 ENSPVAP00000010278.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 7.40e-23 80.2 92 153
Organism Pteropus vampyrus
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +++ +  +++V+FF+++++r wv+r+ l+py++
  ENSPVAP00000010278.1  92 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKCARVHVQFFDDSPTRGWVSRRLLKPYTG 153
                           69***************************.9******************************86 PP
Protein Sequence
(Fasta)		MSRQSTLYSF FPKSPALNKA NKAPVRASGE GGATAATGAS PSPGGDAAWS EAGPGPGPLE 60
SSASPPEARN LNGGLRRSAA PSVASSSCDF SPGDLVWAKM EGYPWWPCLV YNHPFDGTFI 120
REKGKCARVH VQFFDDSPTR GWVSRRLLKP YTGSKSKEAQ KGGHFYSAKP EILRAMQRAD 180
ALNKDIKRLE LAVCDEPSEP EEEMVGATYA SDKSEEDNEI ESEDEVRPKV QGSRRSSRQI 240
KKRRVISDSE SDIGGSDVEF KPDAKEEGSS DEISSGMGDS DSEGLQSSVK VAPKRKRMVT 300
GNGSLKKKSS RKEMPPATKR SSGISSETKS TLSAFSAPQN SESQAHVSGG CDDSSRPTVW 360
YHETLEWLKD GKRRDMHRRR PDHPDFDAST LYVPEDFLNS CTPGMRKWWQ IKSQNFDLVI 420
FYKVGKFYEL YHMDALVGVN ELGLVFMKGN WAHSGFPEIA FGRYSDSLVQ KGYKVARVEQ 480
TETPEMMEAR CRKMAHISKH DKVVRREICR VITKGTQTYS VLEGPSENYS KYLLSLKEKE 540
EDTSGHTRVY GVCFVDASLG KFFIGQFSDD RHCSRFRTLV AHYPPVQVLF EKGNLSTETK 600
MILKGSLSSS LQEGLIPGSQ FWDAAKTLRT LLEEGYFTEK LNEGNGVMLP QVLKSMTSES 660
DSLGLTPGEK SELALSALGG CVFYLKKCLI DQELLSMANF EEYIPLDSDM VSAIRPGAVF 720
AKVNQRMVLD SVTLNNLEIF LNGTNGTTEG TLLEKIDTCH TPFGKRLLKQ WLCAPLCNPY 780
AINDRLDAIE DLMVVPDKIS EVVDLLKKLP DLERLLSKIH NVGSPLKSQN HPDSRAIMYE 840
ETTYSKKKII DFLSALEGFK VICKIIEIME EVVDDFKSKI LKQIVTMQTK NPEGHFPDLT 900
IELNRWDTAF DHEKARKTGL ITPKAGFDSD YDQALADIRE NEQSLLEYLE KQRSRIGCRS 960
IVYWGIGRNR YQLEIPENFI THNLPEEYEL KSTKKGCKRY WTKTIEKKLA NLINAEERRD 1020
VSLKDCMRRL FYNFDKNYKD WQAAVECITV LDVLLCLANY SRGGDGPMCR PVILLPKEDT 1080
PVFLDLKGSR HPCISKTFFG DDFIPNDILI GCEEEEEENG RAYCVLVTGP NMGGKSTLMR 1140
QAGLLAVMAQ MGCYVPAEVC RLTPIDRVFT RLGASDRIMS GESTFFVELS ETASILTHAT 1200
AHSLVLVDEL GRGTATFDGT AIANAVVKEL AENIKCRTLF STHYHSLVED YSQNVAVRLG 1260
HMACMVENEC EDPSQETITF LYKFIKGACP KSYGFNAARV ANLPEEVIQK GHRKAREFEK 1320
MTHSLRLFRE VCLASERSTV DAETVHKLLA SIEEL 1355
Nucleotide Sequence
(Fasta)		ATGTCGCGAC AGAGCACGCT GTATAGCTTC TTCCCCAAGT CTCCAGCGCT GAATAAAGCC 60
AACAAGGCCC CGGTCAGGGC CTCAGGTGAA GGCGGCGCCA CTGCTGCCAC TGGGGCCTCC 120
CCTTCCCCCG GCGGGGATGC AGCCTGGAGC GAGGCCGGGC CTGGGCCCGG TCCCTTGGAG 180
AGCTCCGCGT CGCCTCCCGA GGCGAGGAAC CTCAACGGAG GGCTGCGGAG GTCGGCAGCG 240
CCTTCGGTTG CCTCCAGTTC TTGTGACTTC TCACCAGGTG ATTTGGTTTG GGCCAAGATG 300
GAGGGTTACC CCTGGTGGCC TTGCCTGGTT TACAACCACC CTTTTGATGG AACATTCATC 360
CGTGAGAAAG GGAAGTGTGC CCGAGTTCAT GTACAGTTTT TTGATGACAG CCCAACAAGG 420
GGCTGGGTTA GCAGAAGGCT CTTAAAGCCA TATACAGGTT CAAAATCAAA GGAAGCCCAG 480
AAAGGAGGTC ATTTTTACAG TGCAAAGCCT GAAATACTCA GAGCAATGCA ACGTGCAGAT 540
GCCTTGAATA AAGACATTAA GAGGCTTGAA TTGGCAGTCT GTGATGAACC CTCAGAACCA 600
GAGGAGGAAA TGGTAGGTGC AACTTATGCA TCAGATAAGA GTGAAGAAGA TAATGAAATT 660
GAGAGTGAAG ATGAAGTGCG GCCTAAAGTG CAAGGATCTA GGCGAAGTAG CCGCCAGATT 720
AAAAAACGGA GAGTCATATC AGACTCTGAG AGTGACATTG GTGGCTCTGA TGTGGAATTT 780
AAGCCAGATG CTAAGGAGGA AGGAAGCAGT GATGAAATAA GCAGTGGAAT GGGGGACAGT 840
GACAGTGAAG GCCTGCAGAG CTCTGTCAAA GTTGCTCCAA AGAGGAAGAG AATGGTGACT 900
GGAAATGGCT CTCTCAAAAA GAAAAGTTCA AGGAAAGAAA TGCCCCCAGC CACCAAACGA 960
TCAAGTGGCA TTTCATCAGA AACCAAGAGT ACTTTGAGTG CTTTCTCTGC CCCTCAGAAT 1020
TCTGAATCCC AGGCCCACGT TAGTGGAGGA TGTGATGATA GTAGTCGCCC CACTGTCTGG 1080
TATCATGAAA CTTTAGAATG GCTTAAGGAC GGAAAAAGAA GAGATATGCA TAGGAGGCGA 1140
CCCGATCATC CTGATTTTGA TGCATCTACA CTGTATGTGC CTGAGGATTT CCTTAATTCC 1200
TGTACTCCTG GGATGAGGAA GTGGTGGCAG ATTAAGTCTC AGAACTTTGA TCTTGTCATA 1260
TTTTATAAGG TGGGGAAGTT TTATGAGCTG TACCACATGG ATGCTCTTGT TGGAGTCAAC 1320
GAACTAGGGC TTGTATTCAT GAAAGGCAAC TGGGCCCATT CTGGTTTCCC TGAAATTGCT 1380
TTTGGCCGAT ATTCGGATTC TCTGGTCCAG AAGGGCTATA AAGTAGCACG AGTGGAACAG 1440
ACTGAGACCC CAGAAATGAT GGAGGCACGA TGCCGAAAGA TGGCACATAT ATCTAAACAT 1500
GATAAAGTGG TGAGGAGGGA GATTTGTAGG GTCATTACCA AGGGTACACA GACATACAGT 1560
GTGCTGGAAG GTCCCTCTGA GAACTACAGT AAGTATCTTC TTAGCCTCAA AGAAAAAGAG 1620
GAAGATACTT CTGGCCACAC TCGTGTATAT GGTGTATGCT TTGTTGATGC CTCACTGGGA 1680
AAGTTTTTCA TAGGTCAGTT TTCAGATGAT CGCCATTGTT CAAGGTTTAG GACTCTAGTG 1740
GCACATTATC CTCCGGTACA AGTGCTGTTT GAGAAAGGAA ATCTCTCTAC AGAAACAAAG 1800
ATGATTTTGA AGGGTTCATT ATCTTCTTCT CTTCAGGAAG GTCTTATCCC AGGCTCCCAG 1860
TTTTGGGATG CAGCCAAGAC TTTGAGAACT CTCCTTGAAG AAGGATATTT TACGGAAAAG 1920
TTAAATGAGG GCAATGGGGT GATGTTACCC CAAGTGCTTA AAAGTATGAC TTCAGAGTCT 1980
GATTCTCTAG GATTGACACC AGGAGAGAAA AGTGAATTGG CCCTCTCTGC GCTAGGTGGT 2040
TGTGTCTTCT ACCTCAAAAA ATGCCTTATT GATCAGGAGC TTTTATCAAT GGCTAATTTT 2100
GAAGAATATA TTCCCTTGGA TTCTGACATG GTCAGTGCTA TAAGACCTGG TGCTGTCTTT 2160
GCTAAAGTCA ATCAACGAAT GGTGCTAGAT TCTGTGACAT TAAACAACTT GGAGATTTTT 2220
TTGAATGGAA CAAATGGTAC TACCGAAGGT ACCTTACTAG AAAAGATTGA TACTTGCCAT 2280
ACTCCTTTTG GTAAGCGGCT CCTAAAGCAA TGGCTTTGTG CCCCATTGTG TAATCCTTAT 2340
GCTATCAATG ATCGTCTAGA TGCTATAGAA GACCTGATGG TTGTGCCTGA CAAAATCTCT 2400
GAGGTTGTAG ACCTTTTAAA GAAGCTTCCA GACCTTGAGA GGCTACTGAG TAAAATTCAT 2460
AATGTTGGGT CTCCTCTGAA AAGCCAGAAC CACCCAGATA GCAGGGCTAT AATGTATGAA 2520
GAAACTACAT ACAGCAAAAA AAAGATTATT GATTTTCTTT CTGCTCTGGA AGGATTCAAA 2580
GTAATATGTA AAATTATAGA GATTATGGAA GAAGTTGTCG ATGACTTTAA GTCTAAAATC 2640
CTTAAGCAGA TCGTTACTAT GCAGACGAAA AATCCTGAAG GCCATTTTCC TGATTTGACT 2700
ATAGAACTAA ACCGATGGGA TACAGCCTTT GACCATGAGA AGGCTCGAAA GACTGGACTG 2760
ATTACTCCCA AAGCAGGATT TGACTCTGAT TATGACCAAG CTCTTGCTGA CATAAGAGAA 2820
AACGAACAGA GCCTCCTGGA ATACTTGGAG AAACAGCGCA GTAGAATTGG CTGTAGGAGC 2880
ATTGTCTACT GGGGGATTGG TAGGAATCGT TACCAGTTGG AAATTCCAGA AAATTTCATC 2940
ACCCATAATT TGCCAGAAGA ATATGAGTTG AAATCTACCA AAAAAGGCTG TAAACGATAT 3000
TGGACCAAAA CTATTGAGAA GAAGTTGGCT AATCTGATAA ATGCTGAAGA ACGGAGAGAC 3060
GTATCATTGA AGGACTGCAT GCGGCGACTA TTCTATAACT TTGATAAAAA TTACAAGGAC 3120
TGGCAGGCTG CCGTAGAGTG CATCACAGTG TTGGATGTCT TATTGTGCCT GGCTAACTAC 3180
AGTCGAGGGG GTGATGGTCC TATGTGTCGT CCAGTAATTC TTTTGCCAAA AGAAGACACT 3240
CCTGTCTTCT TAGACCTTAA AGGATCACGC CATCCCTGCA TTTCAAAGAC CTTTTTTGGA 3300
GATGACTTTA TTCCTAATGA CATTCTAATA GGCTGTGAGG AAGAGGAGGA GGAAAATGGC 3360
AGAGCTTATT GTGTGCTTGT TACTGGACCA AATATGGGGG GCAAGTCTAC ACTCATGAGA 3420
CAGGCTGGTC TATTAGCTGT CATGGCCCAG ATGGGTTGTT ATGTACCTGC TGAAGTATGT 3480
AGGCTCACAC CAATTGATAG AGTGTTTACT AGACTTGGTG CCTCAGACAG AATAATGTCA 3540
GGTGAAAGTA CATTTTTTGT TGAATTGAGT GAAACTGCCA GTATACTTAC GCATGCAACA 3600
GCACATTCTC TGGTGCTTGT GGATGAATTA GGAAGAGGTA CTGCAACATT TGATGGGACA 3660
GCAATTGCAA ATGCAGTTGT TAAAGAACTT GCTGAGAATA TAAAGTGTCG TACATTGTTT 3720
TCTACCCACT ATCATTCATT AGTTGAAGAT TATTCTCAAA ATGTTGCAGT ACGCCTAGGA 3780
CACATGGCAT GCATGGTAGA AAATGAATGT GAAGATCCCA GCCAGGAGAC TATTACCTTC 3840
CTTTATAAGT TTATCAAGGG AGCTTGTCCT AAAAGCTATG GCTTTAATGC AGCAAGGGTT 3900
GCTAATCTTC CAGAGGAGGT TATTCAAAAG GGACACAGAA AAGCAAGAGA ATTTGAGAAG 3960
ATGACTCATT CACTGCGATT ATTTCGGGAA GTTTGTCTGG CTAGTGAAAG GTCGACTGTA 4020
GATGCAGAAA CTGTCCATAA GTTGCTGGCT TCGATTGAGG AATTATAG 4069
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 92 0.0 2330
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 92 0.0 2324
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 92 0.0 2320
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 92 0.0 2314
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 92 0.0 2312
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 90 0.0 2287
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 91 0.0 2287
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 90 0.0 2282
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 91 0.0 2279
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 92 0.0 2278
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 91 0.0 2276
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 91 0.0 2272
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 90 0.0 2271
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 90 0.0 2265
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 90 0.0 2252
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 91 0.0 2243
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 94 0.0 2223
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 89 0.0 2221
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 88 0.0 2215
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 88 0.0 2214
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 92 0.0 2205
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 91 0.0 2200
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 87 0.0 2195
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 92 0.0 2141
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 83 0.0 2124
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 83 0.0 2097
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 77 0.0 1970
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 80 0.0 1965
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 71 0.0 1739
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 69 0.0 1689
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 69 0.0 1683
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 64 0.0 1679
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 70 0.0 1674
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 65 0.0 1653
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 61 0.0 1588
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 73 0.0 1579
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 84 0.0 1563
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 89 0.0 1542
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 70 0.0 1435
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 67 0.0 1427
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 66 0.0 1421
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 67 0.0 1412
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 67 0.0 1411
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 66 0.0 1401
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 67 0.0 1392
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 66 0.0 1386
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 67 0.0 1358
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 56 0.0 1340
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 90 0.0 1322
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 65 0.0 1274
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 89 0.0 1211
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 50 0.0 997
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 91 0.0 977
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 95 0.0 969
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 91 0.0 810
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 89 0.0 764
WERAM-Met-0160 AES82183 Medicago truncatula 41 0.0 644
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 91 6e-168 589
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 95 5e-166 583
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 90 5e-158 556
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 55 6e-20 98.2
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 1e-11 70.5
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 36 3e-11 68.9
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 42 6e-11 68.2
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 35 7e-11 67.8
WERAM-Sei-0090 Si024584m Setaria italica 34 2e-06 52.8
Created Date 25-Jun-2016