WERAM Information

Tag Content
WERAM ID WERAM-Pat-0096
Ensembl Protein ID ENSPTRP00000020434.4
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPTRG00000011906.4 ENSPTRT00000022148.4 ENSPTRP00000020434.4
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 3.30e-23 81.6 70 131
Organism Pan troglodytes
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ +++V+FF+++++r wv+++ l+py++
  ENSPTRP00000020434.4  70 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTG 131
                           69***************************.*******************************86 PP
Protein Sequence
(Fasta)		ASARASREGG RAAAAPGASP SPGGDAAWSE AGPGPRPLAR SASPPKAKNL NGGLRRSAAP 60
AAPTSCDFSP GDLVWAKMEG YPWWPCLVYN HPFDGTFIRE KGKSVRVHVQ FFDDSPTRGW 120
VSKRLLKPYT GSKSKEAQKG GHFYSAKPEI LRAMQRADEA LNKDKIKRLE LAVCDEPSEP 180
EEEEEMEVGT TYVTDKSEED NEIESEEEVQ PKTQGSRRSS RQIKKRRVIS DSESDIGGSD 240
VEFKPDTKEE GSSDEISSGV GDSESEGPNS PVKVARKRKR MVTGNGSLKR KSSRKETSSA 300
TKQATSISSE TKNTLRAFSA PQNSESQSHV SGGGDDSSRP TVWYHETLEW LKEEKRRDEH 360
RRRPDHPDFD ASTLYVPEDF LNSCTPGMRK WWQIKSQNFD LVICYKVGKF YELYHMDALI 420
GVSELGLVFM KGNWAHSGFP EIAFGRYSDS LVQKGYKVAR VEQTETPEMM EARCRKMAHI 480
SKYDRVVRRE ICRIITKGTQ TYSVLEGDPS ENYSKYLLSL KEKEEDSSGH TRAYGVCFVD 540
TSLGKFFIGQ FSDDRHCSRF RTLVAHYPPV QVLFEKGNLS KETKTILKSS LSSSLQEGLI 600
PGSQFWDASK TLRTLLEEEY FREKLSDGIG VMLPQVLKGM TSESDSIGLT PGEKSELALS 660
ALGGCVFYLK KCLIDQELLS MANFEEYIPL DSDTVSTTRS GAIFTKAYQR MVLDAVTLNN 720
LEIFLNGTNG STEGTLLERV DTCHTPFGKR LLKQWLCAPL CNPYAINDRL DAIEDLMVVP 780
DKISEVVELL KKLPDLERLL SKIHNVGSPL KSQNHPDSRA IMYEETTYSK KKIIDFLSAL 840
EGFKVMCKII GIMEEVADGF KSKVLKQVIS LQTKNPEGRF PDLTVELNRW DTAFDHEKAR 900
KTGLITPKAG FDSDYDQALA DIRENEQSLL EYLEKQRNRI GCRTIVYWGI GRNRYQLEIP 960
ENFTTRNLPE EYELKSTKKG CKRYWTKTIE KKLANLINAE ERRDVSLKDC MRRLFYNFDK 1020
NYKDWQSAVE CIAVLDVLLC LANYSRGGDG PMCRPVILLP EDTPPFLELK GSRHPCITKT 1080
FFGDDFIPND ILIGCEEEEQ ENGKAYCVLV TGPNMGGKST LMRQAGLLAV MAQMGCYVPA 1140
EVCRLTPIDR VFTRLGASDR IMSGESTFFV ELSETASILM HATAHSLVLV DELGRGTATF 1200
DGTAIANAVV KELAETIKCR TLFSTHYHSL VEDYSQNVAV RLGHMACMVE NECEDPSQET 1260
ITFLYKFIKG ACPKSYGFNA ARLANLPEEV IQKGHRKARE FEKMNQSLRL FREVCLASER 1320
STVDAEAVHK LLTLIKEL 1338
Nucleotide Sequence
(Fasta)		GATCCAACAG CCTCGGCCAG GGCCTCACGC GAAGGCGGCC GTGCCGCCGC TGCCCCCGGG 60
GCCTCTCCTT CCCCAGGCGG GGATGCGGCC TGGAGCGAGG CTGGGCCTGG GCCCAGGCCC 120
TTGGCGCGCT CCGCGTCGCC GCCCAAGGCG AAGAACCTCA ACGGAGGGCT GCGGAGATCG 180
GCAGCGCCTG CTGCCCCCAC CAGTTGTGAC TTCTCACCAG GAGATTTGGT TTGGGCCAAG 240
ATGGAGGGTT ACCCCTGGTG GCCTTGTCTG GTTTACAACC ACCCCTTTGA TGGAACATTC 300
ATCCGCGAGA AAGGGAAATC AGTCCGTGTT CATGTACAGT TTTTTGATGA CAGCCCAACA 360
AGGGGCTGGG TTAGCAAAAG GCTTTTAAAG CCATATACAG GTTCAAAATC AAAGGAAGCC 420
CAGAAGGGAG GTCATTTTTA CAGTGCAAAG CCTGAAATAC TGAGAGCAAT GCAACGTGCA 480
GACGAAGCCT TAAATAAAGA CAAGATTAAG AGGCTTGAAT TGGCAGTTTG TGATGAGCCC 540
TCAGAGCCAG AAGAGGAAGA AGAGATGGAG GTAGGCACAA CTTACGTAAC AGATAAGAGT 600
GAAGAAGATA ATGAAATTGA GAGTGAAGAG GAAGTACAGC CTAAGACACA AGGATCTAGG 660
CGAAGTAGCC GCCAAATAAA AAAACGAAGG GTCATATCAG ATTCTGAGAG TGACATTGGT 720
GGCTCTGATG TGGAATTTAA GCCAGACACT AAGGAGGAAG GAAGCAGTGA TGAAATAAGC 780
AGTGGAGTGG GGGATAGTGA GAGTGAAGGC CCGAACAGCC CTGTCAAAGT TGCTCGAAAG 840
CGGAAGAGAA TGGTGACTGG AAATGGCTCT CTTAAAAGGA AAAGCTCTAG GAAGGAAACG 900
TCCTCAGCCA CCAAACAAGC AACTAGCATT TCATCAGAAA CCAAGAATAC TTTGAGAGCT 960
TTCTCTGCCC CTCAAAATTC TGAATCCCAA TCCCACGTTA GTGGAGGTGG TGATGACAGT 1020
AGTCGCCCTA CTGTTTGGTA TCATGAAACT TTAGAATGGC TTAAGGAGGA AAAGAGAAGA 1080
GATGAGCACA GGAGGAGGCC TGATCACCCC GATTTTGATG CATCTACACT CTATGTGCCT 1140
GAGGATTTCC TCAATTCTTG TACTCCTGGG ATGAGGAAGT GGTGGCAGAT TAAGTCTCAG 1200
AACTTTGATC TTGTCATCTG TTACAAGGTG GGGAAATTTT ATGAGCTGTA CCACATGGAT 1260
GCTCTTATTG GAGTCAGTGA ACTGGGGCTG GTATTCATGA AAGGCAACTG GGCCCATTCT 1320
GGCTTTCCTG AAATTGCATT TGGCCGTTAT TCAGATTCCC TGGTGCAGAA GGGCTATAAA 1380
GTAGCACGAG TGGAACAGAC TGAGACTCCA GAAATGATGG AGGCACGATG TAGAAAGATG 1440
GCACATATAT CCAAGTATGA TAGAGTGGTG AGGAGGGAGA TCTGTAGGAT CATTACCAAG 1500
GGTACACAGA CTTACAGTGT GCTGGAAGGT GATCCCTCTG AGAACTACAG TAAGTATCTT 1560
CTTAGCCTCA AAGAAAAAGA GGAAGATTCT TCTGGCCATA CTCGTGCATA TGGTGTGTGC 1620
TTTGTTGATA CTTCGCTGGG AAAGTTTTTC ATAGGTCAGT TTTCAGATGA TCGCCATTGT 1680
TCGAGATTTA GGACTCTAGT GGCACACTAT CCCCCAGTAC AAGTCTTATT TGAAAAAGGA 1740
AATCTCTCAA AGGAAACTAA AACAATTCTA AAGAGTTCAT TGTCCTCTTC TCTTCAGGAA 1800
GGTCTGATAC CCGGCTCCCA GTTTTGGGAT GCATCCAAAA CTTTGAGAAC TCTCCTTGAG 1860
GAAGAATATT TTAGGGAAAA GCTAAGTGAT GGCATTGGGG TGATGTTACC CCAGGTGCTT 1920
AAAGGTATGA CTTCAGAGTC TGATTCCATT GGGTTGACAC CAGGAGAGAA AAGTGAATTG 1980
GCCCTCTCTG CTCTAGGTGG TTGTGTCTTC TACCTCAAAA AATGCCTTAT TGATCAGGAG 2040
CTTTTATCAA TGGCTAATTT TGAAGAATAT ATTCCCTTGG ATTCTGACAC AGTCAGCACT 2100
ACAAGATCTG GTGCTATCTT CACCAAAGCC TATCAACGAA TGGTGCTAGA TGCAGTGACA 2160
TTAAACAACT TGGAGATTTT TCTGAATGGA ACAAATGGTT CTACTGAAGG AACCTTACTA 2220
GAGAGGGTTG ATACTTGCCA TACTCCTTTT GGTAAGCGGC TCCTAAAGCA ATGGCTTTGT 2280
GCCCCACTCT GTAACCCTTA TGCTATTAAT GATCGTCTAG ATGCCATAGA AGACCTCATG 2340
GTTGTGCCTG ACAAAATCTC CGAAGTTGTA GAGCTTCTAA AGAAGCTTCC AGATCTTGAG 2400
AGACTACTCA GTAAAATTCA TAATGTTGGG TCTCCCCTGA AGAGTCAGAA CCACCCAGAC 2460
AGCAGGGCTA TAATGTATGA AGAAACTACA TACAGCAAAA AGAAGATTAT TGATTTTCTT 2520
TCTGCTCTGG AAGGATTCAA AGTAATGTGT AAAATTATAG GGATCATGGA AGAAGTTGCT 2580
GATGGTTTTA AGTCTAAAGT CCTTAAGCAG GTCATCTCTC TGCAGACAAA AAATCCTGAA 2640
GGTCGTTTTC CTGATTTGAC TGTAGAATTG AACCGATGGG ATACAGCCTT TGACCATGAA 2700
AAGGCTCGAA AGACTGGACT TATTACTCCC AAAGCAGGCT TTGACTCTGA TTATGACCAA 2760
GCTCTTGCTG ACATAAGAGA AAATGAACAG AGCCTCCTGG AATACCTAGA GAAACAGCGC 2820
AACAGAATTG GCTGTAGGAC CATAGTCTAT TGGGGGATTG GTAGGAACCG TTACCAGCTG 2880
GAAATTCCTG AGAATTTCAC CACTCGCAAT TTGCCAGAAG AATACGAGTT GAAATCTACC 2940
AAGAAGGGCT GTAAACGATA CTGGACCAAA ACTATTGAAA AGAAGTTGGC TAATCTCATA 3000
AATGCTGAAG AACGGAGAGA TGTATCATTG AAGGACTGCA TGCGGCGACT GTTCTATAAC 3060
TTTGATAAAA ATTACAAGGA CTGGCAGTCT GCTGTAGAGT GTATCGCAGT GTTGGATGTT 3120
TTATTGTGCC TGGCTAACTA TAGTCGAGGG GGTGATGGTC CTATGTGTCG CCCAGTAATT 3180
CTGTTGCCAG AAGATACCCC CCCCTTCTTA GAGCTTAAAG GATCACGCCA TCCTTGCATT 3240
ACGAAGACTT TTTTTGGAGA TGATTTTATT CCTAATGACA TTCTAATAGG CTGTGAGGAA 3300
GAGGAGCAGG AAAATGGCAA AGCCTATTGT GTGCTTGTTA CTGGACCAAA TATGGGGGGC 3360
AAGTCTACGC TTATGAGACA GGCTGGCTTA TTAGCTGTAA TGGCCCAGAT GGGTTGTTAC 3420
GTCCCTGCTG AAGTGTGCAG GCTCACACCA ATTGATAGAG TGTTTACTAG ACTTGGCGCC 3480
TCAGACAGAA TAATGTCAGG TGAAAGTACA TTTTTTGTTG AATTAAGTGA AACTGCCAGC 3540
ATACTCATGC ATGCAACAGC ACATTCTCTG GTGCTTGTGG ATGAATTAGG AAGAGGTACT 3600
GCAACATTTG ATGGGACAGC AATAGCAAAT GCAGTTGTTA AAGAACTTGC TGAGACTATA 3660
AAATGTCGTA CATTATTTTC AACTCACTAC CATTCATTAG TAGAAGATTA TTCTCAAAAT 3720
GTTGCTGTGC GCCTAGGACA TATGGCATGC ATGGTAGAAA ATGAATGTGA AGACCCCAGC 3780
CAGGAGACTA TTACCTTCCT CTATAAATTC ATTAAGGGAG CTTGTCCTAA AAGCTATGGC 3840
TTTAATGCAG CAAGGCTTGC TAATCTCCCA GAGGAAGTTA TTCAAAAGGG ACATAGAAAA 3900
GCAAGAGAAT TTGAGAAGAT GAATCAGTCA CTACGATTAT TTCGGGAAGT TTGCCTGGCT 3960
AGTGAAAGGT CAACTGTAGA TGCTGAAGCT GTCCATAAAT TGCTGACTTT GATTAAGGAA 4020
TTATAGACTA CATTGGAAGC TTTGAGTTGA CTTCTGACAA AGGTGGTAAA TTCAGACAAC 4080
ATTATGATCT AATAAACTTT ATTTTTTAAA AATG 4115
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 99 0.0 2482
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 99 0.0 2460
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 99 0.0 2459
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 99 0.0 2454
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 98 0.0 2436
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 99 0.0 2395
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 96 0.0 2392
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 93 0.0 2319
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 93 0.0 2315
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 93 0.0 2309
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 92 0.0 2304
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 92 0.0 2303
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 93 0.0 2297
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 92 0.0 2276
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 91 0.0 2269
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 92 0.0 2263
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 91 0.0 2263
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 91 0.0 2262
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 93 0.0 2258
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 93 0.0 2251
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 90 0.0 2237
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 93 0.0 2218
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 89 0.0 2213
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 86 0.0 2185
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 86 0.0 2155
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 92 0.0 2117
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 81 0.0 1980
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 80 0.0 1965
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 70 0.0 1743
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 70 0.0 1728
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 68 0.0 1722
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 71 0.0 1708
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 71 0.0 1699
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 66 0.0 1687
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 91 0.0 1683
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 63 0.0 1609
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 74 0.0 1609
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 90 0.0 1573
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 64 0.0 1568
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 62 0.0 1544
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 62 0.0 1529
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 66 0.0 1439
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 67 0.0 1432
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 67 0.0 1424
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 61 0.0 1410
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 67 0.0 1402
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 67 0.0 1400
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 68 0.0 1371
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 91 0.0 1359
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 92 0.0 1279
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 59 0.0 1239
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 50 0.0 1003
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 95 0.0 972
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 89 0.0 971
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 93 0.0 832
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 89 0.0 793
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 83 0.0 716
WERAM-Met-0160 AES82183 Medicago truncatula 40 0.0 649
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 94 5e-180 629
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 94 3e-168 590
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 63 6e-24 111
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 4e-12 72.0
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 9e-12 70.9
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 32 3e-11 68.9
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 34 7e-11 67.8
WERAM-Sei-0090 Si024584m Setaria italica 35 4e-06 52.0
Created Date 25-Jun-2016