WERAM Information

Tag Content
WERAM ID WERAM-Pem-0088
Ensembl Protein ID ENSPMAP00000009336.1
Gene Name msh6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPMAG00000008456.1 ENSPMAT00000009377.1 ENSPMAP00000009336.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 1.90e-17 62.3 99 160
Organism Petromyzon marinus
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdL waKl+gYpwWP lv+++p+ + ++ +   ++ + +V+FF+  ++r+wv++k  +py++
  ENSPMAP00000009336.1  99 PGDLLWAKLEGYPWWPSLVYDHPESGAHT-RGRGKSLRIHVQFFDTPPTRSWVGAKYCKPYNG 160
                           69***************************.8999999***********************975 PP
Protein Sequence
(Fasta)		MSQKNTLFKY FNKSPGLTAK AKSAGSPTEA DPPPPGASSP PTEKERGPRA ANAKRERGSD 60
VAQAREAAKA PKSSEESAHR AARSAAAIND NLACIEFQPG DLLWAKLEGY PWWPSLVYDH 120
PESGAHTRGR GKSLRIHVQF FDTPPTRSWV GAKYCKPYNG SSSKEAQRGG VFFSTNPQIL 180
GAMKQADKAI PLSMEKRLDL VVCVEPSDEE DSDEADEVDA IASDVEANGK GDGEEEEEED 240
DGGIEKNGRK NKRRRIVVPS DTDDSDAEFK PDTVDASSDE ASSGVDEKEA SEPESASDPE 300
SPVKKRKRTT TKAPALTPSR QPLMLGLSSV ASSGKAATPK QAQTGSNAKA KLSAFSSDTL 360
ESQNGGGQDG GKEGGGWDHE KLDWLRDGKR RDGKRRLQSD PEYDPSSIYV PDSFLSACTP 420
GMRRWWEIKS TLFDTVLFFK VGKFYELYHM DALTGVSELG LLFMKGTWAH SGFPETSFAR 480
FSDGLVQKGY KVARVEQTET PDMMEARCRA MARPATKLDK VVKREVCRII TKGTQTYSIL 540
DGDPSDAQNK FLLAVREREG PPGGSGNNSG ANETGASVRT YGVCFVDTSV GVFHLGQFTD 600
DRHCSRFRTL VAHHAPAQVL YERGGLSAET QKIVRVTLAS ALQDALTPST QFWDATKTLK 660
VEDERGGSGG GGGSSGALPP VLRAMTAASD SLGLAAADEA ELALSALGAM LFYLRKCLID 720
HELLSMGNFR RYQPPDLVLA GDAHNGGYTG LATRRMVLDG VTLTNLEVLQ SSTTGGVEGT 780
LLVRLDSCLT PFGRRLLRAW LVAPPCDPRA IDDRLDALED LMAVPDKVLQ VKDLLRKMPD 840
LERLLSKIHG LGTPLRASRD HPDSRAVLYE ETAYSKRKIA DFLSTLEGFR AASQAAGLLQ 900
ECAGDFKSRL LRKVVSTEDG GHFPDLSPEL QRWDTAFDHQ KARSSGVITP RPGFDPEYDQ 960
ALLDISANKK LLDEYLEKQR KRLSCKSIVY WGTGRNCFQM EVPDAVAQRN TPEEYQLKST 1020
KKGFRRFHSP EIERLMALLS DAEERRDIAM RDCMRRLFYN FDASYKQWSA AMHCMAVLDT 1080
DVLLSLAHYS EQGGEGANPM CRPSVRPPPS EGGSSGGGPF LELRGSRHPC VSTTFLGDSF 1140
IPNDVVVGLS DGDDDGGARC VLVTGPNMGG KSTLMRQAGL IVIMAQLGCY VPAEACRLTP 1200
VDRVFTRLGA SDRIMSVLRR AGESTFFVEL SETSSILQHA TRHSLVLLDE LGFLLRPRGR 1260
GTATYDGTAI ASAVVHELAE GVRCRTLFST HYHSLVEDFA ASPHVRLGHM ACMVEQENDD 1320
DPSQETITFL YKFVAGACPK SYGFNAARLA GLPDAVVRAG HRKAREFESS TNALRAFR 1378
Nucleotide Sequence
(Fasta)		ATGTCACAGA AGAACACGCT CTTCAAGTAC TTCAACAAAT CGCCGGGCCT GACCGCCAAG 60
GCCAAGAGCG CTGGCTCGCC CACCGAGGCC GACCCGCCTC CCCCGGGGGC CTCGTCTCCG 120
CCTACCGAGA AGGAGCGCGG TCCGCGGGCG GCGAACGCTA AGCGAGAGCG CGGCTCCGAT 180
GTGGCCCAGG CCCGAGAGGC GGCGAAGGCG CCAAAGTCGT CGGAAGAGAG TGCTCATAGG 240
GCAGCACGTA GCGCCGCAGC CATCAATGAC AATCTGGCAT GCATTGAGTT CCAACCAGGT 300
GACTTGCTGT GGGCCAAGCT GGAGGGATAC CCGTGGTGGC CCAGCCTGGT GTATGACCAC 360
CCCGAGTCCG GAGCGCACAC ACGGGGCCGC GGAAAGTCCC TGAGAATCCA CGTGCAGTTT 420
TTTGATACTC CTCCTACCCG CAGCTGGGTC GGTGCAAAGT ACTGCAAGCC CTACAATGGA 480
TCCAGCTCGA AGGAGGCGCA GAGGGGAGGC GTCTTCTTCA GCACCAATCC TCAGATCCTG 540
GGGGCGATGA AGCAGGCCGA CAAGGCGATT CCGCTGAGCA TGGAAAAGCG CCTAGACCTC 600
GTCGTGTGTG TGGAGCCATC GGATGAAGAG GACAGCGATG AAGCTGATGA AGTGGATGCG 660
ATTGCGTCGG ACGTGGAAGC GAATGGAAAG GGTGACGGCG AGGAGGAAGA GGAGGAGGAC 720
GACGGGGGAA TCGAGAAAAA CGGTCGGAAG AACAAGCGGC GCCGCATTGT GGTGCCCTCC 780
GACACCGATG ACAGCGACGC CGAGTTCAAA CCGGACACGG TCGATGCGAG CAGCGATGAG 840
GCCAGCAGCG GTGTCGATGA GAAGGAAGCA AGCGAGCCCG AGTCCGCCTC CGACCCGGAG 900
TCGCCCGTCA AGAAGCGCAA GCGCACCACA ACCAAGGCTC CCGCCCTAAC GCCCAGTCGC 960
CAGCCGTTGA TGCTGGGTCT GAGCAGCGTT GCGTCGTCCG GAAAGGCGGC GACCCCCAAG 1020
CAAGCCCAGA CGGGTTCCAA TGCCAAGGCT AAGCTGTCCG CCTTCTCGTC GGACACCCTC 1080
GAGAGCCAGA ATGGCGGGGG GCAGGATGGC GGAAAAGAGG GTGGCGGGTG GGACCATGAG 1140
AAGCTGGACT GGTTGCGGGA CGGCAAGCGT CGCGACGGCA AGAGGCGGCT CCAGTCGGAC 1200
CCCGAGTACG ACCCTTCCTC CATCTACGTC CCCGATTCCT TCCTGTCCGC GTGCACGCCT 1260
GGCATGCGGC GCTGGTGGGA GATCAAGAGC ACGTTGTTCG ACACCGTGCT CTTCTTCAAG 1320
GTGGGCAAGT TCTACGAGCT GTACCACATG GACGCGCTGA CGGGCGTGTC GGAGCTGGGC 1380
CTGCTCTTCA TGAAGGGCAC ATGGGCCCAC TCGGGCTTCC CAGAGACCTC CTTTGCGCGC 1440
TTCTCGGATG GGCTGGTGCA GAAGGGCTAC AAGGTGGCGC GAGTGGAGCA GACGGAGACG 1500
CCCGACATGA TGGAGGCTCG CTGCCGCGCC ATGGCTCGCC CGGCCACAAA GTTAGACAAG 1560
GTGGTGAAGC GCGAGGTTTG CCGCATCATC ACCAAGGGCA CGCAGACGTA CAGCATCCTC 1620
GACGGCGATC CCTCAGACGC GCAGAACAAA TTCCTGCTGG CCGTGCGCGA GAGGGAGGGC 1680
CCGCCCGGCG GCAGTGGCAA CAATAGCGGC GCGAACGAGA CGGGGGCGTC CGTGCGCACG 1740
TACGGCGTGT GTTTCGTCGA CACGTCTGTC GGGGTCTTCC ACCTGGGCCA GTTCACGGAC 1800
GACCGCCACT GCTCGCGCTT CCGCACGCTG GTCGCGCATC ACGCACCCGC GCAGGTTTTG 1860
TACGAGCGCG GGGGCTTGTC AGCCGAGACG CAGAAGATTG TCCGTGTGAC GCTGGCTTCG 1920
GCACTGCAGG ATGCTCTGAC GCCCTCCACT CAGTTCTGGG ATGCCACCAA GACGCTCAAG 1980
GTCGAGGACG AACGCGGAGG CAGCGGCGGC GGTGGGGGCA GTAGCGGTGC CCTGCCGCCC 2040
GTGCTGCGCG CCATGACGGC CGCCAGCGAC TCGCTGGGCC TGGCGGCGGC GGACGAGGCG 2100
GAGCTGGCGC TGTCCGCCCT GGGGGCCATG CTCTTCTACC TTCGCAAGTG CCTCATCGAC 2160
CACGAGCTCC TCTCCATGGG CAACTTCCGC CGCTACCAGC CGCCCGACCT TGTGCTCGCC 2220
GGCGATGCGC ACAACGGTGG TTACACGGGA CTCGCGACTC GCCGCATGGT GCTGGACGGC 2280
GTGACTCTCA CCAACCTGGA GGTTCTGCAG AGCAGCACGA CGGGCGGCGT GGAGGGCACG 2340
TTGCTGGTGC GCCTCGACTC GTGCCTCACG CCGTTCGGGC GCCGCCTGCT GCGCGCCTGG 2400
CTGGTGGCGC CGCCGTGCGA CCCACGAGCC ATCGACGACC GCCTCGACGC GCTGGAGGAC 2460
CTCATGGCCG TCCCCGACAA GGTGTTGCAG GTGAAGGATC TTCTGCGCAA AATGCCCGAC 2520
CTGGAGCGGC TGCTGAGCAA GATTCACGGA CTGGGCACCC CGCTGCGCGC GAGCCGCGAC 2580
CACCCGGACA GCCGCGCCGT CCTCTACGAG GAAACGGCGT ACAGCAAGCG CAAGATCGCC 2640
GACTTCCTCT CCACGCTCGA GGGTTTCCGC GCTGCCAGCC AGGCTGCTGG CCTGCTGCAG 2700
GAGTGCGCGG GCGACTTCAA GTCGCGGCTT CTGCGCAAGG TGGTGTCTAC GGAAGATGGG 2760
GGGCACTTCC CAGACCTGTC CCCCGAGTTG CAGCGCTGGG ACACGGCGTT CGACCACCAG 2820
AAGGCGCGCA GCTCAGGCGT CATCACCCCA CGTCCAGGCT TCGACCCCGA GTATGACCAG 2880
GCGCTCCTGG ACATCTCCGC CAACAAGAAA TTGCTCGATG AATACTTGGA GAAGCAGCGC 2940
AAGCGTCTGA GCTGCAAGTC CATCGTCTAC TGGGGCACGG GTCGCAACTG CTTCCAGATG 3000
GAGGTGCCGG ACGCCGTGGC GCAGAGGAAC ACTCCCGAGG AGTACCAGCT CAAGTCGACC 3060
AAGAAGGGCT TCCGCCGATT CCACTCGCCC GAGATCGAGC GGCTGATGGC GCTTCTCTCG 3120
GACGCCGAGG AGCGGCGCGA CATAGCCATG CGCGACTGCA TGCGCCGCCT CTTCTACAAC 3180
TTCGACGCCA GCTACAAGCA GTGGAGCGCC GCCATGCACT GCATGGCCGT CCTGGACACA 3240
GACGTGCTTC TCAGCCTGGC TCACTACAGC GAGCAGGGCG GAGAGGGCGC TAACCCCATG 3300
TGCCGCCCGA GCGTGCGGCC GCCCCCCTCG GAGGGCGGCT CGTCGGGGGG GGGGCCCTTC 3360
CTGGAGCTGC GTGGCTCCCG CCACCCCTGC GTCTCCACCA CCTTCCTGGG CGACAGCTTC 3420
ATCCCCAACG ACGTGGTGGT GGGCCTTTCG GATGGAGACG ATGACGGCGG CGCCCGTTGC 3480
GTGCTCGTCA CGGGACCCAA CATGGGCGGC AAGTCGACGC TCATGCGCCA GGCGGGGCTC 3540
ATCGTCATCA TGGCACAGCT GGGCTGCTAC GTGCCGGCCG AGGCGTGCCG CCTGACGCCC 3600
GTGGACCGCG TGTTCACGCG GCTGGGGGCC TCTGACCGCA TCATGTCTGT GTTGCGACGC 3660
GCAGGGGAGA GCACGTTCTT CGTGGAGCTG AGCGAGACGT CCAGCATCCT GCAGCACGCG 3720
ACGCGCCACT CCCTCGTGCT GCTCGACGAG CTCGGATTTT TGTTGCGCCC CCGAGGCCGC 3780
GGCACGGCGA CGTACGACGG GACGGCGATC GCGAGCGCCG TGGTGCACGA GCTCGCCGAG 3840
GGCGTGCGCT GCCGCACGCT CTTCTCCACA CACTACCACT CGCTCGTGGA GGACTTCGCG 3900
GCCAGCCCAC ACGTGCGCCT GGGCCACATG GCGTGCATGG TGGAGCAGGA GAATGACGAC 3960
GACCCCAGCC AAGAGACCAT CACCTTCCTC TACAAGTTCG TTGCCGGCGC GTGCCCCAAG 4020
AGCTACGGCT TCAACGCCGC CCGTCTGGCC GGGCTGCCCG ACGCGGTTGT GCGGGCAGGA 4080
CACCGCAAGG CGCGCGAGTT CGAGAGCAGC ACCAACGCCC TCCGTGCATT CAGG 4135
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 59 0.0 1424
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 57 0.0 1404
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 58 0.0 1369
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 58 0.0 1367
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 57 0.0 1365
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 58 0.0 1365
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 56 0.0 1363
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 56 0.0 1362
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 55 0.0 1358
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 56 0.0 1357
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 57 0.0 1355
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 55 0.0 1355
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 57 0.0 1353
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 57 0.0 1352
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 55 0.0 1350
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 57 0.0 1349
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 57 0.0 1349
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 57 0.0 1349
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 57 0.0 1348
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 56 0.0 1347
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 57 0.0 1347
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 55 0.0 1345
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 57 0.0 1345
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 56 0.0 1344
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 57 0.0 1343
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 57 0.0 1343
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 57 0.0 1342
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 57 0.0 1342
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 56 0.0 1340
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 57 0.0 1340
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 57 0.0 1340
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 57 0.0 1339
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 55 0.0 1338
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 56 0.0 1337
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 57 0.0 1333
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 57 0.0 1331
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 57 0.0 1330
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 55 0.0 1319
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 56 0.0 1313
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 56 0.0 1311
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 56 0.0 1309
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 61 0.0 1261
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 60 0.0 1252
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 53 0.0 1249
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 54 0.0 1246
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 56 0.0 1244
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 60 0.0 1233
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 60 0.0 1023
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 48 0.0 922
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 50 0.0 889
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 61 0.0 834
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 52 0.0 766
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 59 0.0 668
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 62 5e-177 619
WERAM-Met-0160 AES82183 Medicago truncatula 38 5e-171 599
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 57 2e-143 508
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 55 1e-132 472
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 58 2e-119 428
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 69 1e-107 389
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 51 5e-87 320
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 38 3e-21 102
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 33 2e-11 70.1
WERAM-Fia-0085 ENSFALP00000006989.1 Ficedula albicollis 33 3e-11 69.3
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 40 4e-11 68.6
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 32 7e-09 61.2
Created Date 25-Jun-2016