WERAM Information

Tag Content
WERAM ID WERAM-Orla-0115
Ensembl Protein ID ENSORLP00000013893.1
Gene Name msh6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSORLG00000011074.1 ENSORLT00000013894.1 ENSORLP00000013893.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 2.30e-16 60 97 157
Organism Oryzias latipes
Domain Profile
  Me_Reader PWWP
              PWWP.txt   2 gdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           g LVwaKl+g pwWP++v+ +pl+++ + +   ++++++V FF++ ++r wv+ + + +y++
  ENSORLP00000013893.1  97 GALVWAKLEGHPWWPCMVVPQPLTGQLF-RGRGRDQRVHVHFFDEPPTRGWVSTRYIREYQG 157
                           78**************************.999**************************9986 PP
Protein Sequence
(Fasta)		MAKQSSIFSF FTKSPPLVAK PKPSSSPAEA DLPSAVKKSN SSPKEEANET QQQQPAKAGK 60
VKQKSQSQSA SGGIKQLFGS KKTPTEERYS SPMCKAGALV WAKLEGHPWW PCMVVPQPLT 120
GQLFRGRGRD QRVHVHFFDE PPTRGWVSTR YIREYQGSDC SDVRPGGVFF SSKPVIHKAM 180
KLADGVLFES PEERVKMPLC VDPSDEEEEE EEMELDQTTL TDEELSGEDE KKSDQSNSAK 240
VGRRSSRGSA EKGGSRSKRR RIVVASDSDE SDEEFKPEHA ASSSEEEEEV EGAASTEEEA 300
ESTQESEVES PVKPVKRKRP AEKSKSSKAK TPAAFTATPK RAPPAVAANT KSRLTAFSAP 360
DSFESQANGP ASAGAATVWD HEKLEWLQEG KRKDGKRRRQ TDEDYDPTSL YVPEDFLNRI 420
TPGMRRWWQL KSEMFDTVIF YKVGKFYELY HMDAVIGVNE LGLTFMKGTW AHSGFPEIGF 480
ARFSDVLVHK GYKVARVEQT ETPEMMEARC KAMAKPSKFD RVVRREVCRI VTRGTQTYSV 540
LDGAPSESQS KFLLSLKEKP EEESSGHCRV YGVCFVDTSV GYFHVGQFPD DRHCSRLRTL 600
IAHFAPAEVL FEKGNPSVET RKILKASLSS ALQEGLHGGS QFWDAQKTLK TLSEEDYFKE 660
SAGEEKQTGG CFLPALLKKM TSESDSLCLS PKEGYELALS ALGGCIFYLK KCLVDKELLS 720
MANFEEYVPV DVEMAKAAGP SSFFAQTRLR MVLDGVTLAN LEIFQNGSGR TEGTLLERLD 780
TCSTPFGKRL LKQWLCAPLC NPTAIKDRLD ALEDLMGAQA QATEAAELLK KLPDLERLLS 840
KIHSIGTPLK GKDHPDSRAV LYEEVTYSKR KIADFLSALE GFKTMQEIIS NFAQVSAKFG 900
SKLLRQLVSL KTEEGGLFPD LSAELKRWDT AFDHQKARST GVITPKAGFD PEYDQALAGI 960
RSCERELNDY LERQKKRLGC KGMAFWGTGK NRFQMEVPDS VPERNIPEEY EVKSTKKGCK 1020
RYVTKETERL FSQLQGLEEK RDAALKDCMR RLFYNFDKNY GDWKTSVECM AVLDVLLAMS 1080
RYSQGGDGPM TRPEVELPED GDQAVPFINL VGSRHPCVTK TFFGDDFIPN DIYIGCPGNG 1140
DGLEEEGCAS CVLVTGPNMG GKSTLMRQCG LVVILAQLGC YVPAESLRFT PVDRVFTRLG 1200
ASDRIMAGES TFFVELSETA SILHHATKHS LVLLDELGRG TATYDGTAIA SAVVKELAEK 1260
VCCRTLFSTH YHSLVEDYAK NSAVRLGHMA CMVENECEDP SQETITFLYK FISGACPKSY 1320
GFNAARLANL PEEVIQSGHK KAREFERSTV SLRLFKKLCQ FAEDPTLDRT ALLAVTQLIH 1380
TL 1382
Nucleotide Sequence
(Fasta)		ATGGCGAAGC AGAGCTCCAT TTTCAGTTTT TTCACCAAGT CTCCGCCGCT GGTTGCCAAG 60
CCGAAACCGA GCTCCTCTCC GGCCGAGGCC GACTTGCCTT CTGCAGTGAA AAAGTCCAAC 120
TCGTCTCCGA AGGAGGAAGC TAATGAGACC CAGCAACAGC AGCCGGCTAA AGCTGGAAAA 180
GTGAAACAAA AAAGTCAGTC ACAGTCTGCG AGTGGAGGAA TCAAACAACT GTTTGGAAGC 240
AAAAAAACTC CGACTGAAGA GAGGTACAGC TCACCTATGT GTAAAGCTGG CGCCCTAGTT 300
TGGGCCAAAT TGGAAGGACA CCCCTGGTGG CCGTGTATGG TAGTACCCCA ACCCCTGACT 360
GGGCAGCTGT TTAGGGGGCG TGGTCGGGAC CAGCGCGTAC ATGTTCATTT CTTTGATGAA 420
CCCCCCACCA GAGGATGGGT CAGCACCAGA TACATCCGGG AATACCAAGG CTCCGACTGC 480
AGTGACGTCA GACCCGGGGG GGTCTTCTTC AGTAGCAAAC CCGTCATCCA CAAGGCCATG 540
AAGCTCGCCG ATGGGGTTTT GTTTGAGAGT CCAGAGGAAA GAGTGAAGAT GCCTCTCTGC 600
GTGGATCCAT CTGATGAGGA GGAAGAGGAA GAAGAAATGG AGCTTGACCA GACAACACTG 660
ACTGACGAAG AGCTTAGTGG CGAGGATGAA AAGAAAAGCG ACCAAAGCAA CTCGGCTAAA 720
GTTGGCCGCC GTTCCTCCCG CGGTTCAGCA GAAAAGGGAG GAAGCCGATC CAAGCGGCGT 780
CGCATCGTTG TGGCTTCTGA CAGCGATGAA TCTGATGAGG AGTTCAAACC AGAACATGCT 840
GCTTCTAGCA GTGAGGAAGA GGAGGAAGTA GAGGGGGCAG CGAGCACCGA AGAAGAGGCA 900
GAAAGCACCC AGGAGTCGGA AGTAGAAAGC CCCGTCAAGC CTGTGAAGCG CAAACGTCCT 960
GCAGAGAAAT CAAAGAGCTC AAAAGCAAAA ACTCCTGCCG CCTTTACGGC CACTCCCAAA 1020
CGCGCCCCAC CGGCAGTCGC GGCGAACACA AAGTCTCGCC TGACGGCGTT CTCTGCTCCT 1080
GACAGCTTCG AGAGTCAGGC GAACGGACCG GCTTCCGCTG GAGCTGCGAC GGTTTGGGAT 1140
CACGAGAAGC TGGAGTGGCT GCAAGAGGGC AAGAGGAAAG ACGGGAAAAG GCGACGACAG 1200
ACGGACGAGG ACTACGACCC CACCAGCCTG TACGTGCCTG AAGACTTCCT CAATAGAATC 1260
ACTCCTGGAA TGCGCCGCTG GTGGCAACTG AAATCTGAGA TGTTTGACAC TGTCATCTTC 1320
TACAAGGTCG GAAAGTTTTA CGAGCTCTAC CACATGGACG CCGTGATCGG AGTCAATGAG 1380
CTGGGGCTGA CGTTCATGAA GGGGACCTGG GCCCACTCTG GCTTCCCAGA GATCGGCTTT 1440
GCCCGTTTCT CCGACGTTTT GGTCCACAAA GGTTATAAGG TGGCTCGGGT GGAGCAGACA 1500
GAGACTCCAG AAATGATGGA AGCGCGCTGC AAGGCCATGG CTAAACCCTC CAAGTTTGAC 1560
CGCGTGGTGA GACGGGAGGT GTGCCGCATC GTCACGCGGG GAACCCAGAC CTACAGCGTG 1620
TTGGACGGAG CTCCTTCTGA GAGCCAGAGC AAGTTCCTCC TGAGTCTAAA AGAAAAGCCC 1680
GAAGAGGAGA GCTCCGGCCA CTGCCGCGTC TACGGCGTCT GCTTTGTGGA CACCTCCGTG 1740
GGTTATTTCC ACGTCGGTCA GTTTCCGGAC GACCGCCACT GCTCACGCCT GCGCACCCTG 1800
ATCGCACACT TTGCCCCTGC CGAGGTGCTA TTCGAAAAGG GGAACCCGTC GGTGGAGACG 1860
CGCAAAATTC TCAAGGCGTC CTTGTCCTCG GCGCTGCAGG AGGGGCTTCA CGGCGGGAGC 1920
CAGTTTTGGG ATGCTCAGAA GACGTTGAAA ACCCTCTCAG AGGAGGACTA TTTTAAGGAG 1980
TCGGCCGGAG AGGAGAAGCA GACCGGGGGC TGTTTTCTCC CAGCTCTTCT GAAGAAAATG 2040
ACCTCTGAGA GCGATTCTCT GTGTTTGTCT CCTAAAGAAG GTTACGAATT GGCCCTGTCT 2100
GCTCTGGGCG GATGCATATT CTACCTAAAG AAATGTCTGG TGGATAAAGA GCTGCTCTCC 2160
ATGGCCAACT TCGAAGAATA CGTTCCTGTT GATGTTGAGA TGGCCAAAGC CGCCGGACCC 2220
TCCAGCTTCT TTGCTCAGAC TCGTCTGCGC ATGGTACTGG ACGGAGTAAC TCTGGCAAAC 2280
TTGGAGATCT TTCAGAATGG ATCGGGACGA ACCGAGGGGA CCCTGCTGGA GCGCCTGGAT 2340
ACCTGCTCCA CGCCGTTTGG CAAGAGGCTG CTGAAGCAGT GGCTCTGTGC TCCCCTGTGC 2400
AATCCCACCG CCATCAAGGA CAGGCTGGAC GCCCTGGAAG ACCTCATGGG AGCTCAGGCT 2460
CAAGCAACCG AGGCTGCCGA GCTGTTGAAG AAGCTTCCGG ATCTGGAGCG TCTTCTGAGT 2520
AAGATCCATA GCATTGGCAC CCCCCTGAAG GGCAAGGACC ACCCAGACAG CAGGGCCGTT 2580
CTCTACGAGG AGGTCACGTA CAGCAAACGC AAGATCGCGG ACTTCCTGTC CGCGCTGGAA 2640
GGTTTCAAAA CCATGCAGGA AATCATCTCC AACTTCGCTC AAGTTTCTGC CAAGTTTGGA 2700
TCCAAGTTGC TGCGTCAGCT CGTCAGTTTG AAAACGGAAG AGGGTGGACT CTTTCCGGAT 2760
CTGTCAGCCG AACTTAAGCG CTGGGACACG GCTTTTGACC ACCAGAAGGC TCGTTCCACC 2820
GGCGTCATAA CCCCGAAAGC CGGCTTTGAC CCGGAGTATG ACCAGGCCCT GGCGGGGATC 2880
CGGAGCTGTG AGCGAGAGCT GAACGATTAC CTGGAGAGGC AGAAGAAAAG GCTGGGCTGT 2940
AAAGGCATGG CCTTCTGGGG AACCGGGAAG AACCGCTTCC AGATGGAGGT TCCTGACAGC 3000
GTCCCGGAGA GGAACATTCC AGAGGAGTAC GAGGTGAAGT CGACAAAGAA AGGCTGCAAG 3060
CGTTACGTGA CGAAGGAGAC GGAGCGGCTG TTCTCACAGC TGCAAGGACT GGAGGAGAAA 3120
AGAGATGCTG CTCTGAAAGA CTGCATGAGG AGGCTGTTCT ATAACTTTGA CAAGAACTAT 3180
GGAGACTGGA AGACCAGCGT GGAGTGTATG GCCGTGCTGG ATGTTTTATT GGCCATGTCA 3240
CGCTACAGTC AGGGTGGAGA CGGTCCCATG ACGAGGCCAG AGGTGGAGCT ACCAGAGGAC 3300
GGCGACCAGG CTGTCCCCTT CATCAACCTC GTCGGATCGC GTCACCCATG TGTCACCAAA 3360
ACCTTTTTCG GCGACGACTT CATCCCTAAT GACATCTATA TTGGTTGCCC CGGAAACGGG 3420
GATGGTTTGG AGGAGGAGGG CTGTGCTTCC TGTGTGCTCG TCACCGGACC GAATATGGGC 3480
GGGAAGTCTA CTCTGATGCG GCAGTGTGGA CTGGTGGTCA TTTTAGCCCA GCTGGGATGC 3540
TACGTTCCCG CTGAGAGCCT CCGGTTCACA CCGGTAGACA GGGTCTTCAC CCGGCTGGGA 3600
GCTTCTGACC GGATCATGGC CGGAGAGAGC ACCTTCTTTG TGGAGCTCAG CGAGACGGCC 3660
AGCATCCTCC ATCATGCCAC TAAACACTCA CTGGTGCTGC TCGATGAATT AGGGAGGGGC 3720
ACTGCCACAT ACGATGGCAC AGCCATCGCC AGCGCCGTAG TGAAGGAGCT GGCCGAGAAG 3780
GTCTGCTGCC GCACGCTCTT CTCCACACAT TACCACTCGC TGGTGGAGGA TTACGCCAAG 3840
AACTCGGCCG TGCGGTTAGG ACACATGGCC TGCATGGTGG AGAACGAATG TGAGGACCCC 3900
AGCCAGGAGA CCATCACCTT CCTCTACAAG TTCATCAGCG GCGCCTGTCC GAAAAGTTAC 3960
GGGTTCAACG CTGCTCGACT CGCCAACCTC CCTGAGGAAG TCATCCAGTC GGGACACAAG 4020
AAGGCCCGAG AATTCGAGAG GAGTACCGTC AGCCTCCGGT TGTTCAAGAA GCTCTGCCAG 4080
TTTGCAGAAG ATCCTACACT GGACCGCACC GCTTTACTCG CCGTCACTCA GCTGATTCAC 4140
ACCTTATAGT TTGTTCTCTG CAGCCGAGCA AATGGGGGGG AAAAAAGAAA CACACACTAC 4200
TGTCTTGATC TAATAAAGTT TATTTAAAAA AAATGACAAT GTTTCATCTA G 4252
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 81 0.0 2137
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 82 0.0 2108
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 82 0.0 2099
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 79 0.0 2002
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 78 0.0 1997
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 78 0.0 1964
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 75 0.0 1894
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 69 0.0 1801
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 72 0.0 1728
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 62 0.0 1620
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 63 0.0 1592
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 63 0.0 1578
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 62 0.0 1571
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 61 0.0 1546
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 59 0.0 1539
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 61 0.0 1538
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 59 0.0 1538
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 59 0.0 1528
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 59 0.0 1523
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 62 0.0 1520
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 59 0.0 1520
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 62 0.0 1519
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 73 0.0 1519
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 59 0.0 1511
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 59 0.0 1509
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 60 0.0 1493
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 71 0.0 1460
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 69 0.0 1457
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 68 0.0 1452
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 70 0.0 1435
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 68 0.0 1434
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 69 0.0 1430
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 68 0.0 1427
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 68 0.0 1427
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 68 0.0 1427
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 68 0.0 1426
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 69 0.0 1425
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 68 0.0 1424
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 68 0.0 1419
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 68 0.0 1419
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 69 0.0 1415
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 68 0.0 1414
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 69 0.0 1405
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 67 0.0 1391
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 65 0.0 1347
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 68 0.0 1312
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 62 0.0 1248
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 67 0.0 1184
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 51 0.0 1012
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 52 0.0 975
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 69 0.0 964
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 68 0.0 752
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 65 0.0 744
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 68 0.0 715
WERAM-Met-0160 AES82183 Medicago truncatula 40 1e-180 631
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 63 2e-162 571
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 63 3e-157 554
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 79 2e-131 468
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 64 3e-118 424
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 68 2e-97 355
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 62 1e-48 193
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 42 3e-09 62.4
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 42 4e-09 62.0
WERAM-Fia-0085 ENSFALP00000006989.1 Ficedula albicollis 42 6e-09 61.2
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 38 9e-09 60.8
Created Date 25-Jun-2016