WERAM Information

Tag Content
WERAM ID WERAM-Orn-0123
Ensembl Protein ID ENSONIP00000012391.1
Gene Name msh6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSONIG00000009861.1 ENSONIT00000012400.1 ENSONIP00000012391.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 1.80e-18 66.8 96 156
Organism Oreochromis niloticus
Domain Profile
  Me_Reader PWWP
              PWWP.txt   2 gdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           g LVwaK++g pwWP++v+ +pl+++++ + + ++++ +V FF++ ++r wv+++++ +y++
  ENSONIP00000012391.1  96 GALVWAKMEGHPWWPCMVVPQPLTGQQM-RGHGRDQRIHVHFFDEPPTRGWVSSNRVREYQG 156
                           78*************************9.999****************************86 PP
Protein Sequence
(Fasta)		MAKQSSLFNF FTKSPPLVAK AKPSPSPAEA DLPSSVEKSN SSPKEQAQQT PQQTKDTNKA 60
KKESKSKPAS GGFKKLFGDK AQTTKESSPP CLFSAGALVW AKMEGHPWWP CMVVPQPLTG 120
QQMRGHGRDQ RIHVHFFDEP PTRGWVSSNR VREYQGSDSS DAKPGGVYFC GKPLIRRAME 180
LADGVMFDSP EKRLKMPLCT DPSDVEEEEE DEEMELDSLV VTDEEGSDEY DNKSEALKPF 240
KVSASLFCAL MEKGSKAKRR RIIAASDSDG SDEDFKPEHA ASSSEDEEDG GGESCEEKEE 300
STEKSDVESP IKPAKRKRPA EKSAKTKAKT STAPSVTPKS IPAAVATDTK SRLSAFSAPE 360
SFESQANGSG STAGATVWDH EKLEWLQDGK RKDGKRRRQT DDDYDPSTLY VPNDFMNEIT 420
PGMRRWWQLK SEMFDTVIFY KVGKFYELYH MDAVIGVNEM GLTFMKGTWA HSGFPEIGFG 480
RFSDVLVQKG YKVARVEQTE TPEMMEARCK TMLKPTKFDR VVRREVCRII TRGTQTYSVL 540
DGAPSESQSK FLLSLKEKAE EEGSGRCRTY GVCFVDTSVG CFHVGQFSDD RHCSRLRTLI 600
AHYAPAEVLF EKGNPSVETR KILKASLSSA LQEGLNAGTQ FWDAQKTLKT LSEEDYFKEA 660
TGKEQGTGSS FLPALLKEMT SESDSLCLTP KEGYELALSA LGGCIFYLKK CLVDQELLSM 720
ANFEEYVPVD VEMEKAAGPA SFFAKTRQRM VLDGVTLVNL EIFQNGSGGT EGTLLERLDT 780
CSTPFGKRLL KQWLCAPLCN PTSIRDRLDA VEDLMGAQAQ ATEVSDLLKK LPDLERLLSK 840
IHSIGTPLKS QDHPDSRAVL YEEVTYSKRK IADFLSALEG FKTMQDIISL FAPVSGEFHS 900
TLLCQVISLN SEKNGLFPDL SGELKRWDTA FDHQKARTTG VITPKAGFDP EYDQALTGIK 960
NCERELQDYL DRQKKRLGCK SMSFWGTGKN RYQMEVPDSV SERNVPEEYE LKSTKKGWKR 1020
YVTKETERMF SELQGFEEKR DAALKDCMRR LFYNFDKNYS DWKTAVECMA VLDVLLALSR 1080
YSQGSDGPMA RPEVVLPEDD AQVAPFIDLK GSRHPCVTKT FFGDDFIPND IFIGCPGTGE 1140
NGEDDSLASC VLVTGPNMGG KSTLMRQCGL VIILAQLGCY IPAESLRFTP VDRVFTRLGA 1200
SDRIMAGEST FFVELSETSS ILHHATKHSL VLLDELGRGT ATYDGTAIAS AVVKELAEKI 1260
CCRTLFSTHY HSLVEDYANN PAVRLGHMAC MVENECEDPS QETITFLYKF ITGACPKSYG 1320
FNAARLANLP EEVIQSGHRK AREFEKSTVS LRLFKKLCQF AEDAAPDSTR FTSLIQLLST 1380
L 1381
Nucleotide Sequence
(Fasta)		CATTGGACGA GGCTCGTGTC CACGCCCACA ACACCCCGTA CGTGTTTCCC GCGAACGGCT 60
TGCGTTTGCG CCGTGACGCT CAGTAGCTGT ACGCTAGCTG GTGGAGGAAG GTTGGGGGTG 120
GTTGTCGTCG GAGTTATTTA AAATACAAAC ACAGGGAAAC AGACTTTCAA CTCGCACACA 180
TGGCGAAGCA AAGCTCGCTT TTTAATTTCT TCACCAAGTC TCCGCCGCTA GTCGCCAAAG 240
CGAAGCCGAG TCCCTCCCCG GCGGAGGCAG ACCTGCCTTC CTCTGTAGAG AAGTCCAACT 300
CCTCTCCGAA AGAGCAAGCT CAACAGACTC CGCAGCAGAC AAAAGACACC AACAAAGCTA 360
AGAAGGAAAG TAAGTCCAAG CCAGCGAGCG GAGGATTCAA GAAACTGTTT GGCGACAAGG 420
CCCAAACAAC CAAAGAAAGC AGCCCTCCAT GCTTATTCAG TGCTGGCGCC CTTGTGTGGG 480
CAAAAATGGA AGGGCACCCC TGGTGGCCGT GCATGGTGGT ACCCCAGCCT CTGACTGGGC 540
AGCAGATGAG GGGCCATGGT CGTGACCAGC GCATACATGT TCATTTCTTT GATGAACCTC 600
CAACAAGAGG ATGGGTCAGC TCTAATAGAG TCAGAGAGTA CCAAGGCTCT GACAGCAGTG 660
ATGCTAAACC TGGAGGAGTC TACTTCTGTG GCAAACCTTT AATTCGTCGT GCAATGGAGC 720
TGGCTGATGG AGTTATGTTT GACAGCCCAG AAAAAAGATT AAAGATGCCT CTCTGCACGG 780
ACCCATCTGA TGTAGAAGAG GAGGAGGAAG ATGAAGAAAT GGAGCTTGAC AGCTTAGTAG 840
TGACTGATGA AGAGGGCAGT GATGAGTATG ACAACAAAAG CGAAGCCCTG AAGCCATTCA 900
AAGTCAGTGC AAGTTTATTC TGTGCATTAA TGGAAAAAGG AAGCAAAGCC AAGCGCCGTC 960
GCATTATTGC GGCCTCAGAT AGTGACGGAT CAGATGAGGA TTTCAAACCA GAACACGCTG 1020
CGTCCAGCAG TGAGGATGAA GAGGACGGAG GGGGGGAAAG CTGTGAAGAG AAAGAAGAGA 1080
GCACCGAAAA GTCAGACGTG GAAAGCCCCA TCAAGCCTGC CAAGCGCAAA CGTCCTGCAG 1140
AAAAGTCAGC TAAAACAAAA GCAAAGACAT CTACTGCTCC ATCTGTTACG CCTAAAAGCA 1200
TTCCAGCAGC AGTTGCGACT GACACAAAAT CTCGTTTGTC AGCCTTCTCT GCTCCCGAGA 1260
GCTTTGAGAG CCAGGCGAAT GGATCAGGCT CCACTGCAGG GGCAACAGTT TGGGATCATG 1320
AGAAACTGGA GTGGTTGCAG GACGGCAAGA GAAAAGACGG CAAACGGCGG CGACAGACAG 1380
ATGATGACTA TGATCCTAGC ACCTTGTATG TGCCAAATGA CTTTATGAAT GAAATCACTC 1440
CTGGTATGCG TCGGTGGTGG CAGCTCAAAT CTGAGATGTT TGATACAGTG ATTTTCTACA 1500
AGGTGGGAAA GTTTTATGAG CTCTACCACA TGGATGCTGT GATTGGAGTC AACGAGATGG 1560
GACTGACATT CATGAAGGGG ACTTGGGCGC ACTCTGGTTT TCCAGAGATT GGCTTTGGAC 1620
GTTTCTCAGA TGTACTGGTG CAGAAAGGCT ACAAGGTGGC TCGTGTGGAG CAGACAGAGA 1680
CCCCAGAGAT GATGGAAGCG CGCTGTAAGA CGATGCTCAA GCCCACTAAA TTTGACCGTG 1740
TAGTGAGAAG AGAAGTGTGC AGGATTATCA CACGTGGTAC CCAAACCTAC AGTGTGTTGG 1800
ATGGTGCTCC TTCAGAGAGC CAGAGCAAGT TCCTCCTTAG TTTGAAAGAA AAGGCTGAAG 1860
AAGAAGGCTC CGGCCGCTGC CGCACATATG GAGTCTGTTT TGTAGATACA TCAGTGGGTT 1920
GTTTTCATGT CGGTCAGTTC TCAGATGATC GTCACTGCTC ACGCCTGCGT ACCCTCATAG 1980
CACACTATGC CCCCGCTGAG GTGCTCTTTG AGAAAGGAAA CCCATCTGTT GAAACTCGCA 2040
AAATACTCAA AGCCTCTCTG TCCTCTGCTC TGCAGGAAGG ACTTAATGCA GGAACACAGT 2100
TCTGGGATGC TCAGAAGACT CTGAAAACCC TCTCAGAGGA AGATTATTTT AAAGAGGCAA 2160
CTGGCAAGGA GCAGGGGACT GGGAGCAGCT TTCTCCCCGC TCTTCTAAAA GAGATGACAT 2220
CTGAGAGTGA TTCACTGTGC CTTACTCCTA AGGAGGGCTA TGAACTAGCA CTGTCAGCTT 2280
TGGGTGGATG CATTTTCTAC CTGAAGAAAT GCTTGGTGGA CCAAGAGCTG CTCTCCATGG 2340
CTAACTTTGA AGAATATGTC CCAGTTGATG TTGAGATGGA GAAAGCTGCA GGACCTGCCA 2400
GTTTCTTTGC CAAGACTCGT CAGCGTATGG TGCTTGATGG AGTGACTCTG GTAAACTTGG 2460
AAATCTTTCA GAATGGGTCA GGAGGAACAG AAGGGACACT GCTGGAGCGT TTGGACACCT 2520
GCTCTACTCC GTTTGGAAAG AGGCTTCTGA AGCAGTGGCT CTGCGCTCCT CTGTGTAACC 2580
CCACATCTAT CAGGGACAGA TTGGATGCAG TGGAGGACCT GATGGGAGCT CAAGCCCAGG 2640
CTACTGAGGT TTCAGACCTT CTAAAAAAAC TTCCAGATCT AGAGCGCCTG CTGAGCAAAA 2700
TCCACAGTAT CGGGACACCT CTGAAGAGCC AGGACCACCC TGACAGCAGA GCAGTTCTCT 2760
ATGAGGAAGT GACCTACAGC AAGCGCAAGA TAGCAGACTT CCTCTCAGCA CTGGAAGGTT 2820
TCAAAACGAT GCAGGACATC ATTTCTCTCT TTGCTCCAGT TTCAGGCGAG TTTCATTCCA 2880
CGTTGCTTTG TCAAGTTATC AGCCTCAATA GCGAAAAGAA CGGCCTCTTT CCCGACCTCT 2940
CTGGTGAACT CAAACGCTGG GACACGGCCT TTGACCACCA GAAAGCCCGC ACTACTGGAG 3000
TAATAACCCC CAAAGCTGGC TTTGACCCAG AGTACGACCA GGCTCTGACT GGAATCAAGA 3060
ACTGTGAACG AGAGCTGCAG GATTATCTGG ACAGACAGAA GAAGAGACTT GGCTGTAAAA 3120
GCATGTCCTT CTGGGGAACT GGGAAGAACC GCTATCAGAT GGAGGTTCCT GACAGCGTCT 3180
CAGAGAGGAA TGTCCCTGAA GAGTATGAGT TAAAGTCTAC AAAGAAAGGC TGGAAGCGTT 3240
ATGTGACAAA GGAGACTGAA CGGATGTTCT CAGAGCTGCA AGGATTTGAG GAGAAGAGAG 3300
ATGCTGCACT CAAAGACTGC ATGAGGAGGC TCTTCTATAA CTTTGACAAG AACTACAGTG 3360
ACTGGAAGAC TGCTGTGGAG TGCATGGCAG TGCTTGATGT GCTGCTGGCC TTATCTCGCT 3420
ACAGCCAGGG CAGTGACGGG CCTATGGCCA GGCCAGAGGT CGTGCTTCCC GAGGATGACG 3480
CCCAGGTTGC ACCCTTCATT GACCTCAAGG GATCCCGTCA TCCCTGTGTC ACCAAGACCT 3540
TTTTTGGCGA CGACTTCATT CCTAATGACA TCTTCATTGG CTGCCCTGGC ACCGGTGAAA 3600
ATGGTGAAGA TGACAGTCTG GCCTCTTGCG TCCTCGTCAC AGGGCCAAAC ATGGGTGGAA 3660
AGTCTACTCT AATGAGACAA TGTGGACTCG TGATCATTCT TGCCCAGCTG GGTTGCTACA 3720
TTCCAGCTGA GAGCCTCCGC TTCACGCCAG TTGACAGGGT CTTCACTCGG CTGGGCGCCT 3780
CAGATCGTAT CATGGCTGGA GAAAGCACTT TCTTTGTGGA GCTGAGTGAG ACTTCCAGCA 3840
TCCTGCACCA TGCCACTAAA CACTCACTTG TGCTTCTGGA TGAATTAGGA AGGGGCACAG 3900
CCACATATGA TGGCACAGCA ATCGCCAGCG CTGTTGTCAA GGAGCTTGCT GAGAAGATCT 3960
GCTGTCGCAC TCTGTTCTCT ACACATTACC ACTCCCTGGT GGAGGACTAT GCCAACAACC 4020
CTGCCGTGCG TTTGGGCCAC ATGGCATGCA TGGTGGAGAA TGAGTGTGAG GATCCAAGTC 4080
AAGAGACCAT CACTTTCCTC TACAAGTTCA TAACGGGTGC GTGTCCTAAG AGTTATGGAT 4140
TCAATGCTGC TCGACTCGCC AACCTACCAG AGGAAGTTAT CCAGTCAGGA CACAGGAAGG 4200
CCAGAGAGTT TGAGAAAAGC ACCGTCAGTC TCAGACTTTT CAAGAAGCTG TGCCAGTTCG 4260
CTGAGGATGC TGCACCGGAC AGCACCCGTT TCACTTCCCT CATTCAACTG CTCAGTACTC 4320
TGTAA 4326
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 82 0.0 2184
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 82 0.0 2180
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 82 0.0 2137
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 80 0.0 2119
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 81 0.0 2113
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 79 0.0 2036
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 77 0.0 1999
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 71 0.0 1834
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 74 0.0 1787
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 66 0.0 1712
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 65 0.0 1643
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 65 0.0 1617
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 64 0.0 1605
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 64 0.0 1599
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 65 0.0 1598
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 63 0.0 1576
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 64 0.0 1576
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 63 0.0 1575
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 62 0.0 1572
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 62 0.0 1568
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 62 0.0 1567
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 62 0.0 1566
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 62 0.0 1565
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 63 0.0 1565
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 60 0.0 1564
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 62 0.0 1563
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 63 0.0 1561
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 62 0.0 1561
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 63 0.0 1560
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 63 0.0 1560
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 62 0.0 1558
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 62 0.0 1557
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 62 0.0 1556
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 63 0.0 1555
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 62 0.0 1550
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 62 0.0 1550
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 62 0.0 1548
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 62 0.0 1547
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 62 0.0 1546
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 62 0.0 1545
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 62 0.0 1541
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 60 0.0 1541
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 61 0.0 1526
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 62 0.0 1521
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 59 0.0 1469
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 61 0.0 1425
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 58 0.0 1363
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 68 0.0 1216
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 46 0.0 1078
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 56 0.0 1010
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 69 0.0 969
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 58 0.0 877
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 71 0.0 775
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 70 0.0 716
WERAM-Met-0160 AES82183 Medicago truncatula 42 0.0 649
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 65 1e-165 582
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 64 2e-159 561
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 80 3e-134 477
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 66 1e-120 432
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 59 3e-101 368
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 66 6e-44 177
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 46 5e-11 68.6
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 45 8e-11 67.8
WERAM-Fia-0085 ENSFALP00000006989.1 Ficedula albicollis 46 9e-11 67.8
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 37 6e-09 61.2
Created Date 25-Jun-2016