WERAM Information

Tag Content
WERAM ID WERAM-Orc-0143
Ensembl Protein ID ENSOCUP00000012569.2
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSOCUG00000014615.2 ENSOCUT00000014618.2 ENSOCUP00000012569.2
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 1.40e-23 82.8 92 153
Organism Oryctolagus cuniculus
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +q+ ++ +++V+FF+++++r wv+++ l+py++
  ENSOCUP00000012569.2  92 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-RQKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTG 153
                           69***************************.*******************************86 PP
Protein Sequence
(Fasta)		MSRQSTLFSF FPKTPLPNKS PGRASRDGGG ARAATGASAS PSGDEAWSEA GPGPRPLADS 60
ASSPKARNLN GGLRRSAAPA VHVSNSSCDF SPGDLVWAKM EGYPWWPCLV YNHPFDGTFI 120
RQKGKSVRVH VQFFDDSPTR GWVSKRLLKP YTGSKSKEAQ KGGHFYSSKP EILRAMERAD 180
EALNKDKIKR LELAVCDEPS EQEEEEEEME VAPTYTSDKS EEDNEIESEE EVQPKLQGSR 240
RSSRQIKKRR VISDSESDIG GSDVEFKPDA KEEGSSDEVS SAVGDSESEG LDSPVKVVPK 300
RKRMVTGNGS LKRKNSRKEM PSATKRAPGI LAETKSTLST FSAPQNSESP AQVSGGGGDD 360
SGRPTTWYHE TLEWLKKEKR RDAHRRRPDH PDFDASTLHV PEDFLNSCTP GMRKWWQIKS 420
QNFDLVIFYK VGKFYELYHM DALIGVSELG LVFMKGNWAH SGFPEIAFGR YSDSLVQKGY 480
KVARVEQTET PEMMEARCRK MAHISKHDRV VRREICRIIT KGTQTYSVLE GDPSENYSKF 540
LLSLKEKEED SSGHTRVYGV CFVDTSLGKF SIGQFADDRH CSRFRTLVAH YPPAQVLFEK 600
GNLSVETKAV LKGSLSSSLQ EGLIPGSQFW DAAKTLRTLL EEGYFTEKSN EESGVLLPQV 660
LKGMTSESDS IGLTPGEKSE LALSALGGCV FYLKKCLIDQ ELLSMANFEE YIPLDSDMVS 720
ATRPGAVFSK ASQRMVLDAV TLNNLEVFLN GTNGSTEGTL LEKIDTCYTP FGKRLLKHWL 780
CAPLCSPCAI NDRLDAIEDL MAVPDKVSEV VDLLKKLPDL ERLLSKIHNV GSPLKSQNHP 840
DSRAIMYEET TYSKKKIIDF LSALEGFKTM CKIVEVVEDV VDDFKSKLLT QVVTLQTKNP 900
EGRFPDLTME LHRWDTAFDH EKARKTGLIT PKAGFDSDYD QALADIRENE QSLLDYLEKQ 960
RSRIGCRTIV YWGIGRNRYQ LEIPENFTTR NLPEEYELKS TKKGCKRYWT KTIEKKLANL 1020
INAEERRDLS LKDCMRRLFY NFDKNYKDWH SAVECIAVLD VLLCLANYSR GGDGPMCRPV 1080
ILLPGENTAP FLELKGSRHP CITKTFFGDD FIPNDILIGC EEDEEENGKA YCVLVTGPNM 1140
GGKSTLMRQA GLLAVMAQMG CYVPAEVCRL TPIDRVFTRL GASDRIMSGE STFFVELSET 1200
ASILTHATAH SLVLVDELGR GTATFDGTAI ANAVVKELAE TIKCRTLFST HYHSLVEDYS 1260
QNDAVRLGHM ACMVENECED PSQETITFLY KFIKGACPKS YGFNAARLAN LPEEVIQKGH 1320
RKAREFEKMT QSLRLFREVC LASERSTIDA EALHKLLTLI KEL 1363
Nucleotide Sequence
(Fasta)		ATGTCGCGAC AGAGCACCCT GTTTAGCTTC TTCCCCAAGA CTCCGCTGCC GAACAAGTCC 60
CCGGGCAGGG CCTCACGAGA CGGCGGCGGT GCCCGCGCTG CCACGGGGGC CTCCGCTTCC 120
CCCAGCGGGG ATGAGGCCTG GAGCGAGGCT GGGCCTGGGC CCAGGCCCCT GGCGGACTCT 180
GCGTCGTCAC CAAAGGCGAG GAACCTGAAC GGAGGGCTTC GCAGGTCAGC GGCGCCCGCC 240
GTCCACGTCA GCAACAGTTC TTGTGACTTC TCACCAGGTG ATTTGGTTTG GGCCAAGATG 300
GAGGGTTACC CCTGGTGGCC TTGTCTGGTG TACAACCACC CCTTTGATGG AACATTCATC 360
CGCCAGAAAG GGAAATCAGT TCGTGTCCAT GTACAGTTTT TTGATGACAG CCCAACAAGA 420
GGCTGGGTTA GCAAAAGGCT GTTAAAGCCG TACACAGGTT CAAAATCGAA GGAAGCCCAG 480
AAGGGAGGTC ATTTTTATAG TTCAAAGCCT GAAATACTGA GAGCAATGGA ACGCGCAGAT 540
GAAGCCTTAA ATAAAGACAA AATTAAGAGG CTTGAATTGG CAGTGTGTGA TGAGCCCTCA 600
GAGCAAGAGG AGGAGGAAGA AGAGATGGAG GTAGCTCCAA CTTACACATC AGATAAGAGT 660
GAAGAAGATA ATGAGATTGA GAGTGAAGAG GAAGTGCAGC CTAAATTGCA AGGATCTAGG 720
CGAAGTAGCC GCCAAATAAA AAAACGAAGG GTCATTTCAG ATTCTGAGAG TGACATTGGT 780
GGCTCTGATG TGGAATTCAA GCCAGATGCT AAGGAGGAAG GAAGCAGTGA TGAAGTTAGC 840
AGTGCAGTGG GTGACAGTGA GAGTGAAGGC CTGGACAGCC CTGTCAAAGT TGTTCCCAAG 900
CGAAAGAGAA TGGTGACTGG AAATGGGTCT CTTAAAAGGA AAAATTCAAG GAAGGAGATG 960
CCCTCAGCCA CCAAGCGAGC ACCTGGCATT TTGGCAGAAA CCAAGAGTAC TTTGAGTACT 1020
TTCTCTGCTC CTCAGAATTC TGAGTCCCCT GCCCAGGTTA GTGGAGGAGG AGGTGATGAC 1080
AGTGGTCGCC CCACTACCTG GTACCATGAA ACTTTAGAAT GGCTTAAAAA GGAAAAGAGA 1140
AGAGATGCAC ACAGGAGGCG GCCCGATCAC CCCGACTTTG ATGCATCCAC GCTCCATGTG 1200
CCTGAAGATT TCCTGAATTC CTGTACTCCC GGCATGAGGA AGTGGTGGCA GATTAAGTCT 1260
CAGAACTTTG ATCTTGTCAT CTTCTATAAG GTGGGGAAGT TTTATGAACT GTATCATATG 1320
GATGCTCTTA TTGGCGTCAG TGAACTGGGG CTGGTATTCA TGAAAGGCAA CTGGGCGCAT 1380
TCTGGTTTTC CTGAAATTGC TTTTGGCCGA TACTCGGATT CCTTGGTGCA GAAGGGCTAT 1440
AAAGTAGCAC GCGTTGAACA GACTGAAACC CCAGAAATGA TGGAGGCAAG ATGCCGAAAG 1500
ATGGCACACA TATCTAAGCA TGACAGAGTG GTAAGGAGGG AGATTTGTAG GATCATCACC 1560
AAGGGTACAC AGACCTACAG TGTGCTGGAA GGTGACCCTT CTGAGAACTA CAGTAAGTTT 1620
CTTCTTAGCC TGAAGGAGAA AGAGGAAGAT TCTTCTGGGC ACACTCGTGT GTATGGTGTG 1680
TGCTTTGTTG ACACGTCACT GGGGAAGTTT TCCATAGGTC AGTTTGCAGA TGACCGCCAT 1740
TGCTCCAGGT TTAGGACCCT AGTGGCACAC TATCCTCCAG CGCAAGTCTT GTTTGAGAAA 1800
GGAAATCTCT CAGTCGAAAC CAAGGCAGTC CTGAAGGGCT CATTATCCTC TTCTCTTCAG 1860
GAGGGTCTGA TACCAGGCTC CCAGTTTTGG GATGCAGCCA AAACTCTGAG AACTCTCCTC 1920
GAAGAAGGGT ATTTTACAGA AAAGTCAAAT GAGGAGAGTG GGGTGCTGTT ACCCCAGGTG 1980
CTTAAAGGTA TGACCTCAGA GTCCGATTCC ATTGGGTTGA CACCAGGAGA GAAGAGTGAA 2040
TTGGCCCTCT CTGCTCTTGG TGGTTGTGTC TTCTACCTCA AAAAATGCCT TATTGATCAG 2100
GAGCTTTTAT CAATGGCTAA TTTTGAAGAA TATATTCCTT TGGATTCTGA CATGGTCAGT 2160
GCTACAAGAC CTGGTGCTGT CTTCTCTAAA GCCAGTCAGC GAATGGTGCT AGATGCAGTG 2220
ACCTTAAACA ACTTGGAGGT TTTTCTGAAT GGGACAAATG GCTCCACTGA AGGGACCTTG 2280
TTAGAGAAGA TTGATACTTG CTACACTCCC TTTGGTAAGC GGCTCCTCAA GCACTGGCTT 2340
TGTGCCCCAC TCTGTAGCCC TTGTGCTATC AATGATCGTC TAGATGCCAT AGAAGACCTC 2400
ATGGCTGTGC CTGATAAAGT CTCTGAAGTT GTAGACCTTC TGAAGAAGCT TCCAGATCTT 2460
GAAAGGCTTC TGAGTAAAAT TCACAACGTT GGGTCTCCCC TAAAGAGCCA AAACCACCCA 2520
GACAGTAGGG CTATAATGTA TGAAGAAACT ACATACAGCA AAAAAAAGAT AATTGATTTT 2580
CTTTCTGCTC TTGAAGGATT CAAAACAATG TGTAAGATTG TAGAGGTTGT GGAAGACGTC 2640
GTCGATGACT TTAAGTCAAA ACTCCTGACG CAGGTCGTAA CTTTGCAGAC AAAAAACCCT 2700
GAAGGCCGTT TTCCTGATTT GACTATGGAA CTGCACCGAT GGGATACGGC CTTTGACCAT 2760
GAAAAGGCTC GGAAGACTGG ACTCATCACT CCCAAAGCAG GATTTGACAG TGATTATGAC 2820
CAAGCTCTTG CTGATATAAG AGAAAATGAA CAGAGCCTCC TGGACTACTT AGAGAAACAA 2880
CGCAGTCGAA TTGGCTGTAG GACCATAGTC TACTGGGGGA TTGGTAGGAA CCGCTACCAG 2940
TTGGAAATCC CAGAGAATTT CACCACCCGC AATTTGCCAG AAGAGTATGA GTTGAAATCT 3000
ACCAAGAAAG GCTGCAAAAG ATACTGGACC AAAACTATTG AGAAGAAATT GGCCAATCTG 3060
ATAAACGCAG AAGAACGGAG AGACCTATCA CTGAAGGACT GCATGCGACG ACTATTCTAC 3120
AACTTTGATA AAAACTACAA GGACTGGCAT TCTGCTGTAG AGTGCATCGC AGTGCTGGAT 3180
GTCTTACTGT GCTTGGCTAA CTACAGTCGA GGGGGTGATG GCCCTATGTG CCGTCCAGTA 3240
ATTCTGTTGC CAGGAGAAAA CACGGCTCCC TTCTTAGAGC TTAAAGGATC ACGTCACCCC 3300
TGCATTACAA AGACATTTTT TGGAGATGAT TTTATTCCTA ACGACATTCT AATAGGCTGT 3360
GAGGAAGATG AGGAAGAAAA TGGCAAAGCC TATTGTGTGC TTGTTACTGG ACCGAATATG 3420
GGGGGCAAGT CTACCCTCAT GAGACAGGCT GGCCTATTAG CTGTAATGGC CCAGATGGGT 3480
TGTTATGTAC CTGCTGAAGT GTGTAGGCTC ACGCCAATTG ATAGAGTGTT TACTAGACTC 3540
GGTGCCTCAG ATAGAATAAT GTCAGGTGAA AGTACATTTT TTGTTGAATT GAGTGAGACG 3600
GCCAGCATAC TTACACATGC AACAGCACAT TCCCTGGTTC TTGTAGATGA ATTAGGAAGA 3660
GGTACTGCAA CCTTTGATGG GACAGCAATA GCCAATGCAG TTGTTAAAGA ACTTGCTGAG 3720
ACTATTAAGT GTCGTACTTT GTTTTCTACT CACTACCATT CATTAGTAGA AGATTATTCT 3780
CAAAATGATG CTGTGCGTCT AGGACATATG GCATGCATGG TAGAAAATGA GTGTGAAGAC 3840
CCCAGTCAGG AGACTATTAC CTTCCTCTAT AAATTCATTA AGGGAGCTTG TCCCAAGAGC 3900
TATGGCTTCA ATGCAGCGAG ACTTGCTAAT CTTCCAGAAG AGGTCATTCA AAAGGGACAC 3960
AGAAAAGCGA GAGAATTTGA GAAGATGACT CAATCACTAC GATTATTTCG GGAAGTTTGC 4020
CTGGCTAGTG AGAGGTCGAC TATAGATGCT GAAGCGCTCC ATAAGTTGCT GACTCTGATT 4080
AAGGAATTAT AG 4093
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 91 0.0 2321
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 91 0.0 2315
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 90 0.0 2315
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 91 0.0 2311
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 90 0.0 2309
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 90 0.0 2302
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 90 0.0 2294
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 89 0.0 2293
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 90 0.0 2290
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 92 0.0 2287
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 89 0.0 2284
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 90 0.0 2279
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 88 0.0 2261
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 89 0.0 2258
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 89 0.0 2256
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 88 0.0 2245
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 88 0.0 2243
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 92 0.0 2235
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 88 0.0 2231
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 87 0.0 2219
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 92 0.0 2218
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 86 0.0 2214
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 85 0.0 2192
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 92 0.0 2189
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 84 0.0 2165
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 90 0.0 2110
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 80 0.0 1960
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 76 0.0 1960
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 70 0.0 1716
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 69 0.0 1716
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 69 0.0 1705
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 63 0.0 1650
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 91 0.0 1610
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 61 0.0 1589
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 72 0.0 1585
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 83 0.0 1567
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 72 0.0 1546
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 73 0.0 1531
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 69 0.0 1466
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 69 0.0 1461
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 67 0.0 1456
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 68 0.0 1448
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 70 0.0 1446
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 68 0.0 1442
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 68 0.0 1425
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 70 0.0 1417
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 67 0.0 1395
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 89 0.0 1326
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 64 0.0 1295
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 89 0.0 1250
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 58 0.0 1229
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 51 0.0 1014
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 88 0.0 976
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 95 0.0 951
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 90 0.0 818
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 89 0.0 775
WERAM-Met-0160 AES82183 Medicago truncatula 41 0.0 662
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 90 6e-169 592
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 93 2e-167 588
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 90 4e-156 550
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 63 3e-25 115
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 4e-12 72.0
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 7e-12 71.2
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 35 3e-11 68.9
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 34 7e-11 68.2
WERAM-Sei-0090 Si024584m Setaria italica 36 2e-06 53.1
Created Date 25-Jun-2016