WERAM Information

Tag Content
WERAM ID WERAM-Loa-0023
Ensembl Protein ID ENSLAFP00000001328.3
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSLAFG00000001592.3 ENSLAFT00000001592.3 ENSLAFP00000001328.3
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 6.80e-23 80.9 7 68
Organism Loxodonta africana
Domain Profile
  Me_Reader PWWP
              PWWP.txt  1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63
                          +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ + +V+FF+++++r wv+++ l+py++
  ENSLAFP00000001328.3  7 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKSVRIHVQFFDDSPTRGWVSKRLLKPYTG 68
                          69***************************.*******************************86 PP
Protein Sequence
(Fasta)		SSCDFSPGDL VWAKMEGYPW WPCLVYNHPF DGTFIREKGK SVRIHVQFFD DSPTRGWVSK 60
RLLKPYTGSK AKEAQKGGHF YSAKPEILRA MQSADEALNK DKIKRLELAV CDEPSEPEED 120
EEMEVDATNT SDKHEENNEI DSEEEVQPKT QGSRRSSRQI KKRRVISDSE SDAGGSDVEF 180
KPDAKEEGSS DEISSGVGDS ESEGLYSPVK VAPKRKKTMT GNGSLKRKNS RKEMPSATKR 240
ATGILSETKS TLNAFSAPQN SESQSHVSGG GDDSSRPTVW YHETLEWLKE EKRRDERRRR 300
PDHPDFDAST LFVPEDFLNS CTPGMRKWWQ IKSQNFDLVI FYKVGKFYEL YHMDALIGVN 360
ELGLVFMKGN WAHSGFPEIA FGRYSDSLVQ KGYKVARVEQ TETPEMMEAR CRKMAHISKH 420
DRVVRREICR IITKGTQTYS VLEGDPSENY SKYLLSLKEK EEDSSGHTRV YGVCFVDTSL 480
GKFYVGQFSD DRHCSRFRTL VAHYPPVQVL FEKGNLSAET RMILKSSLSS SLQEGLMPGS 540
QFWDAAKTLR ILLEDGYFTE KLNEGSGVML PQVLKGMTSE SDSIGLTPGE KSELALSALG 600
GCIFYLKKCL IDQELLSMAN FEEYTPLDSD MVSAAKPGAI FVKANQRMVL DAVTLNNLEI 660
FLNGTNGSTE GTLLERIDTC HTPFGKRLLK QWLCAPLCSP FPINDRLDAI EDLMVVPDKI 720
SEVVDLLKKL PDLERLLSKI HNVGSPLKSQ NHPDSRAIMY EETTYSKKKI IDFLSALEGF 780
KVMCKIIEVM EEVVDDFNSK LLKQVITLQT KNPEGRFPDL TTELKRWDTA FDHEKARKTG 840
LITPKAGFDS DYDQALADIR ENEQSLLEYL EKQRSRIGCR TIVYWGIGRN RYQLEIPESF 900
TIRNLPEEYE LKSTKKGCKR YWTKTIEKKL ANLINAEERR DVSLKDCMRR LFYNFDKNYK 960
DWQSAVECIA VLDVLLCLAN YSRGGDGPMC RPVILLPEDD NPPFLELKGS RHPCITKTFF 1020
GDDFIPNDIL IGCEEEEGNG KAYCVLVTGP NMGGKSTLMR QAGLLAVMAQ MGCYVPAEVC 1080
RLTPIDRVFT RLGASDRIMS GESTFFVELS ETASILTHAT AHSLVLVDEL GRGTATFDGT 1140
AIADAVVQEL AENIKCRTLF STHYHSLVEN YSQNVAVRLG HMACMVENEC EDPSQETITF 1200
LYKFIKGACP KSYGFNAARL ANLPEEVIQK GHRKAREFEK MTKSLRLFRE VCLASERSTV 1260
EVEAVHKLFT LIKEL 1275
Nucleotide Sequence
(Fasta)		AGTTCTTGTG ACTTCTCACC AGGTGATTTG GTTTGGGCCA AGATGGAGGG TTACCCTTGG 60
TGGCCTTGCT TGGTTTACAA CCACCCCTTT GATGGAACAT TCATCCGTGA GAAAGGGAAA 120
TCTGTCCGCA TTCATGTGCA GTTTTTTGAT GACAGCCCTA CAAGGGGCTG GGTTAGCAAA 180
AGGCTGTTAA AGCCATATAC AGGTTCAAAA GCAAAGGAAG CCCAGAAGGG AGGTCATTTT 240
TACAGTGCAA AGCCTGAAAT ACTCAGAGCA ATGCAAAGTG CAGATGAAGC CTTAAATAAA 300
GACAAGATTA AGAGGCTTGA ATTGGCAGTG TGTGATGAGC CCTCAGAGCC AGAAGAGGAC 360
GAGGAGATGG AGGTAGATGC AACCAATACA TCAGATAAGC ATGAAGAAAA TAATGAAATT 420
GACAGCGAAG AGGAAGTACA GCCTAAGACA CAAGGATCCA GGCGTAGTAG CCGCCAGATA 480
AAAAAACGCA GAGTCATATC AGACTCTGAG AGTGACGCTG GTGGTTCTGA TGTGGAGTTC 540
AAACCAGATG CTAAGGAGGA AGGAAGCAGC GATGAAATAA GCAGTGGAGT GGGGGACAGT 600
GAGAGTGAAG GCCTATACAG TCCCGTCAAA GTTGCTCCAA AACGGAAGAA GACAATGACT 660
GGAAACGGCT CTCTCAAAAG GAAAAATTCA AGGAAGGAAA TGCCCTCAGC CACTAAAAGA 720
GCAACTGGCA TTTTGTCAGA AACGAAGAGT ACTCTGAATG CCTTCTCTGC CCCTCAAAAT 780
TCTGAATCCC AATCCCACGT TAGTGGAGGA GGTGACGACA GCAGTCGTCC CACTGTCTGG 840
TATCATGAGA CTTTAGAGTG GCTTAAGGAG GAGAAGAGAA GAGATGAACG CAGGAGGCGG 900
CCCGATCACC CTGATTTTGA TGCATCCACA CTCTTTGTGC CTGAGGATTT CCTTAATTCC 960
TGTACTCCTG GGATGAGGAA GTGGTGGCAA ATTAAGTCTC AGAATTTTGA TCTTGTCATC 1020
TTTTATAAGG TGGGGAAATT TTATGAGTTG TATCACATGG ATGCTCTCAT TGGAGTCAAT 1080
GAACTGGGAC TGGTATTCAT GAAAGGCAAC TGGGCCCATT CTGGTTTCCC TGAAATTGCA 1140
TTTGGCCGAT ACTCAGATTC CCTGGTGCAG AAGGGTTACA AGGTAGCGCG AGTGGAACAA 1200
ACTGAGACCC CGGAAATGAT GGAGGCACGA TGCCGGAAGA TGGCACACAT ATCTAAGCAT 1260
GATAGAGTGG TGAGGAGGGA GATCTGTAGG ATCATAACCA AGGGTACACA GACCTACAGT 1320
GTGCTGGAAG GTGACCCCTC TGAGAACTAC AGCAAGTATC TTCTTAGCCT CAAGGAAAAA 1380
GAGGAAGATT CTTCTGGCCA CACCCGTGTG TATGGTGTGT GCTTTGTTGA TACCTCGCTG 1440
GGAAAGTTTT ACGTAGGTCA GTTTTCAGAT GATCGCCATT GTTCCAGGTT TAGGACTCTA 1500
GTGGCACACT ACCCTCCGGT CCAAGTCTTG TTTGAGAAAG GAAATCTCTC AGCGGAAACT 1560
AGGATGATTC TGAAGAGTTC GTTATCGTCT TCTCTTCAGG AAGGCCTGAT GCCAGGCTCC 1620
CAGTTTTGGG ATGCAGCCAA AACTTTGAGA ATTCTCCTTG AAGATGGATA CTTTACAGAA 1680
AAGCTAAATG AGGGCAGTGG GGTGATGTTA CCCCAGGTGC TTAAAGGTAT GACCTCAGAG 1740
TCTGATTCCA TTGGGTTGAC ACCAGGAGAG AAGAGTGAAC TGGCCCTATC TGCTCTGGGT 1800
GGTTGCATTT TCTACCTCAA AAAATGCCTT ATCGACCAGG AACTTTTATC AATGGCTAAT 1860
TTTGAGGAAT ATACTCCTTT GGATTCTGAC ATGGTCAGTG CCGCAAAGCC TGGTGCTATC 1920
TTTGTTAAAG CCAATCAACG AATGGTGCTA GATGCAGTGA CGTTAAATAA CTTGGAGATT 1980
TTTCTGAATG GGACAAATGG TTCTACTGAA GGGACCCTGC TAGAGAGAAT TGACACCTGC 2040
CATACTCCTT TTGGTAAGCG GCTCCTAAAG CAGTGGCTTT GTGCCCCACT CTGTAGCCCT 2100
TTCCCTATCA ATGATCGACT AGATGCCATA GAAGACCTCA TGGTTGTGCC TGACAAAATC 2160
TCTGAGGTTG TAGACCTTTT AAAGAAGCTT CCAGACCTTG AGAGGCTGCT GAGCAAAATA 2220
CATAATGTTG GGTCTCCTCT GAAGAGCCAG AACCACCCAG ACAGCAGGGC TATAATGTAT 2280
GAAGAGACTA CATACAGCAA AAAAAAGATC ATTGATTTTC TTTCTGCTCT GGAAGGATTC 2340
AAAGTAATGT GTAAAATTAT AGAGGTAATG GAAGAAGTTG TTGATGACTT TAATTCTAAA 2400
CTCCTTAAAC AGGTCATTAC CCTCCAGACA AAAAATCCTG AAGGCAGATT TCCTGATTTG 2460
ACTACAGAAT TGAAACGATG GGATACAGCC TTTGACCATG AAAAGGCTCG TAAGACTGGA 2520
CTTATCACTC CAAAAGCAGG ATTTGACTCA GATTATGACC AAGCTCTTGC CGACATAAGA 2580
GAAAATGAAC AGAGCCTCCT GGAGTATTTA GAGAAACAGC GCAGTCGGAT TGGCTGCAGG 2640
ACCATAGTCT ACTGGGGGAT TGGCAGGAAC CGTTATCAGC TGGAGATTCC AGAGAGTTTC 2700
ACCATCCGGA ACTTGCCAGA AGAATATGAG TTGAAATCTA CCAAGAAGGG CTGTAAACGA 2760
TACTGGACCA AAACAATCGA GAAGAAGTTG GCTAATCTGA TAAACGCTGA AGAACGGAGA 2820
GACGTGTCAT TGAAGGACTG CATGCGGCGG CTATTCTATA ACTTTGATAA AAATTACAAG 2880
GACTGGCAAT CTGCTGTAGA GTGTATTGCA GTATTGGACG TCTTGTTGTG TCTGGCTAAC 2940
TATAGTCGAG GAGGTGATGG CCCTATGTGT CGTCCAGTAA TCCTGTTGCC AGAAGATGAC 3000
AATCCCCCCT TCTTAGAGCT TAAAGGATCA CGCCACCCCT GCATTACGAA GACCTTTTTT 3060
GGAGATGACT TTATTCCTAA TGATATCCTA ATAGGCTGTG AGGAAGAGGA GGGAAATGGC 3120
AAAGCTTATT GTGTGCTTGT TACTGGACCA AATATGGGGG GCAAATCTAC ACTCATGAGG 3180
CAGGCTGGCC TGTTAGCTGT AATGGCCCAG ATGGGTTGCT ATGTACCTGC TGAAGTGTGC 3240
AGGCTCACAC CGATTGATAG AGTGTTTACT AGACTTGGTG CCTCAGACAG AATAATGTCA 3300
GGTGAAAGTA CATTTTTTGT TGAGCTGAGT GAGACTGCCA GCATCCTGAC ACACGCGACC 3360
GCACATTCTC TGGTGCTTGT GGATGAACTA GGAAGAGGTA CTGCAACATT TGATGGGACA 3420
GCAATAGCAG ATGCAGTTGT TCAGGAACTC GCTGAGAACA TAAAATGCCG TACACTGTTT 3480
TCTACTCACT ACCACTCCTT AGTAGAAAAT TATTCTCAAA ATGTTGCCGT GCGCCTAGGA 3540
CACATGGCAT GCATGGTAGA AAACGAATGT GAAGACCCCA GCCAGGAGAC TATTACCTTC 3600
CTCTATAAAT TCATTAAGGG AGCCTGTCCT AAAAGCTACG GCTTTAATGC AGCCAGGCTT 3660
GCTAATCTCC CGGAGGAGGT CATCCAAAAG GGACACAGGA AAGCAAGAGA GTTTGAGAAG 3720
ATGACCAAGT CACTGCGGTT ATTTCGGGAA GTTTGCCTGG CTAGTGAAAG GTCAACTGTA 3780
GAGGTTGAAG CTGTCCATAA GTTGTTCACT TTGATTAAGG AATTATAG 3829
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 92 0.0 2335
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 93 0.0 2332
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 93 0.0 2332
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 93 0.0 2331
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 93 0.0 2330
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 93 0.0 2325
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 93 0.0 2325
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 92 0.0 2322
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 93 0.0 2320
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 93 0.0 2319
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 92 0.0 2318
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 92 0.0 2311
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 91 0.0 2310
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 93 0.0 2305
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 91 0.0 2303
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 92 0.0 2302
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 92 0.0 2301
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 91 0.0 2299
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 93 0.0 2288
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 92 0.0 2282
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 91 0.0 2281
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 90 0.0 2244
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 89 0.0 2240
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 86 0.0 2176
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 86 0.0 2162
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 92 0.0 2142
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 80 0.0 2047
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 80 0.0 2033
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 71 0.0 1802
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 69 0.0 1771
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 70 0.0 1761
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 70 0.0 1756
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 68 0.0 1744
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 68 0.0 1742
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 71 0.0 1734
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 65 0.0 1646
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 66 0.0 1619
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 87 0.0 1610
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 89 0.0 1597
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 64 0.0 1588
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 64 0.0 1584
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 63 0.0 1575
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 63 0.0 1562
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 62 0.0 1561
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 63 0.0 1543
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 63 0.0 1539
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 62 0.0 1511
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 62 0.0 1431
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 91 0.0 1426
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 57 0.0 1393
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 89 0.0 1260
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 47 0.0 1093
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 90 0.0 1014
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 94 0.0 961
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 91 0.0 839
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 92 0.0 809
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 82 0.0 759
WERAM-Met-0160 AES82183 Medicago truncatula 39 0.0 659
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 96 0.0 634
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 93 2e-166 584
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 61 2e-22 105
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 5e-12 71.6
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 9e-12 70.9
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 32 6e-11 68.2
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 34 1e-10 67.0
Created Date 25-Jun-2016