WERAM Information


Tag Content
WERAM ID WERAM-Gam-0173
Ensembl Protein ID ENSGMOP00000017118.1
Gene Name msh6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSGMOG00000015945.1 ENSGMOT00000017546.1 ENSGMOP00000017118.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 2.20e-17 63 91 151
Organism Gadus morhua
Domain Profile
  Me_Reader PWWP

              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpys 62 
ag+LVwaKl+g pwWP++v+ +pl ++++ + ++++ +V FF++ ++r wv++k + +y
ENSGMOP00000017118.1 91 AGSLVWAKLEGHPWWPCMVVPQPLSGLQM-RGRGRNQRIHVHFFDEPPTRGWVSAKYVREYL 151
599*************************9.999*************************9995 PP

Protein Sequence
(Fasta)
AKQSSLFNFF TKSPPPVSKP KLSPSPTEAD VPSSGLKSNS SPKEQAKLAT PNKPVKIRNP 60
NQNSKTSNGG FGKLFGDKAP AANSAPCPFN AGSLVWAKLE GHPWWPCMVV PQPLSGLQMR 120
GRGRNQRIHV HFFDEPPTRG WVSAKYVREY LGSDSSDAKS GGTFFSGRPE IRRAMELADK 180
VMFDSPEKRL QMPLSMDPSD EEEEEEEDME LDKSTLSDRG EDEEMEEEEK SSKPSRRSSR 240
STVDKGSKPK RRRIIVASDT DGSDEEFNPK KAAASKEEEV QEAVSSSEEE EEEESEVDSP 300
IKPVKRKRPD EKASKPKPKP AAAAPAITPK RPPVSTADTK SRLSAFSAAD NGEGQANGTA 360
GGGGGATTWD HEKLEWLQDG KRKDGRRRRQ ADSDYDPTTL YVPDDFLNKC TPGIRRWWQL 420
KADMFDAVLF YKVGKFYELY HMDAVIGVNE VNLTFMKGTW AHSGFPEIGF GRFSDALVQK 480
GYKVARVEQT ETPDMMEARC KTMARPTKFD RVVRREVCRI ITRGTQTYSV LDGAPSECQS 540
KYLLSLKERP EPESSGSART YGVSFVDTSV GFFHVGQFQD DRHCSRLRTL VAHFAPAQVL 600
FERGNPSLET RKILKSSLAS AMQEALTANT QFWDAQKTLK TLAEEDYFNE SVGKDQEAGG 660
SVLPSVLKSM TSESDSLGLT PKEGYELALS ALGGCMFYLK KCFVDHELLS MANFEEYVPV 720
DVEMEKAAGS ASSFFSQTRQ RVVLDGVTLA NLEILQNGTG GTEGTLLERL DTCSTPFGKR 780
LLKQWLCAPL CNPTSIEARL DALEDLMGAR GEASEASELL KKLPDLERLL SKIHSIGTPL 840
KGQDHPDSRA VLYEEVTYSK RKIADFLSAL EGFKTMQEII SGFAKVSGEF RSALLRQVVN 900
LKAGRGGLFP DLSGELRRWE TAFDHQKART TGVITPKAGF DPEFDQALGE IKTCERELQD 960
YLDRQKKRLG CKSMTFWGTG RNRYQMEVPE SVSIPEEYEV KSTKKGWKRY VTTESEALFA 1020
ELQGYEEKRD AALKDCMRRL FYNFDKNYRD WQTGVECMAV LDVLLSLMRY SQGGDGPMCR 1080
PRLVLPEGAA ERSAPFLDLR GSRHPCVTKT FFGDDFIPND IYINCPEEED EEKEGGAAGH 1140
APCVLVTGPN MGGKSTLMRQ CGLVLILAQL GCYVPADSLQ FTPVDRVFTR LGASDRIMAG 1200
ESTFFVELSE TASILHHATE HSLVLLDELG RGTATYDGTA IASAVVKELA EKVGCRTLFS 1260
THYHSLVEDY ANNPAVRLGH MACMVENECE DPSQETITFL YKFIAGACPK SYGFNAARLA 1320
NLPEDVIQAG HQKAREFEKS TMSLRIFRKL CKFAEDATLG KAHFVSLVQT ISSV 1374
Nucleotide Sequence
(Fasta)
GCCAAGCAAA GTTCCCTGTT CAACTTCTTC ACCAAGTCTC CACCGCCTGT CTCCAAGCCT 60
AAGCTCAGTC CTTCTCCGAC CGAGGCAGAC GTCCCGTCCT CCGGCCTGAA GTCGAACTCT 120
TCCCCGAAAG AGCAGGCTAA GCTAGCTACA CCGAATAAGC CCGTCAAAAT ACGAAACCCA 180
AACCAAAACT CAAAGACCTC GAATGGAGGA TTCGGTAAGC TGTTTGGGGA TAAAGCGCCT 240
GCGGCCAACA GCGCTCCATG CCCGTTCAAC GCTGGCTCCC TGGTCTGGGC TAAGCTGGAG 300
GGGCACCCGT GGTGGCCGTG CATGGTCGTC CCCCAGCCCC TAAGTGGACT GCAGATGAGG 360
GGTCGTGGGC GGAACCAACG CATCCATGTC CATTTCTTTG ACGAGCCTCC TACAAGGGGC 420
TGGGTCAGCG CCAAGTATGT ACGAGAATAC CTAGGCTCCG ACAGCAGTGA TGCTAAAAGC 480
GGTGGCACTT TCTTCAGTGG GAGGCCTGAG ATCCGGCGTG CCATGGAGCT AGCGGACAAA 540
GTCATGTTTG ACAGTCCAGA GAAAAGGCTG CAGATGCCTC TCTCCATGGA CCCATCTGAC 600
GAGGAAGAGG AAGAGGAGGA AGACATGGAG CTTGATAAGT CAACGCTATC TGATAGAGGC 660
GAGGACGAAG AGATGGAGGA AGAGGAGAAG TCATCCAAGC CCAGTCGCCG TTCCTCCAGA 720
TCCACGGTGG ACAAGGGCAG TAAACCCAAG CGCCGGCGCA TCATCGTGGC CTCCGACACC 780
GACGGCTCAG ACGAGGAGTT CAACCCCAAA AAAGCTGCGG CCAGCAAAGA AGAAGAGGTG 840
CAGGAGGCGG TGAGCAGTTC AGAGGAAGAG GAGGAGGAGG AGTCCGAAGT GGACAGCCCG 900
ATTAAACCTG TGAAGCGCAA ACGTCCCGAC GAGAAAGCCT CCAAGCCAAA ACCAAAGCCG 960
GCCGCCGCTG CACCAGCGAT AACCCCGAAA CGCCCGCCGG TATCCACCGC AGACACCAAG 1020
TCACGACTGT CCGCCTTCTC TGCGGCAGAC AACGGCGAGG GCCAGGCCAA CGGCACGGCC 1080
GGCGGCGGCG GTGGGGCGAC CACCTGGGAC CACGAGAAGC TGGAGTGGCT GCAGGACGGC 1140
AAACGCAAAG ATGGCCGCCG CCGCCGGCAG GCGGACAGCG ACTACGACCC CACCACCCTC 1200
TACGTGCCCG ACGACTTCCT GAACAAGTGC ACTCCCGGGA TCCGGCGCTG GTGGCAGCTG 1260
AAGGCGGACA TGTTCGACGC GGTGCTCTTC TACAAGGTGG GCAAGTTCTA CGAGCTGTAC 1320
CACATGGACG CCGTGATCGG CGTCAACGAG GTGAACCTCA CCTTCATGAA GGGCACCTGG 1380
GCCCACTCGG GCTTCCCCGA GATCGGGTTC GGCCGCTTCT CGGACGCGCT CGTCCAGAAG 1440
GGCTACAAGG TGGCGCGGGT GGAGCAGACG GAGACGCCGG ACATGATGGA GGCCCGCTGC 1500
AAGACCATGG CGCGCCCCAC CAAGTTCGAC CGCGTGGTGA GGCGCGAGGT GTGCCGGATC 1560
ATCACGCGGG GCACCCAGAC GTACAGCGTG CTGGACGGGG CGCCGTCCGA GTGCCAGAGC 1620
AAGTACCTGC TGAGCCTGAA GGAGCGGCCG GAGCCGGAGA GCTCCGGCTC GGCCCGCACC 1680
TACGGCGTGA GCTTCGTGGA CACCTCCGTG GGCTTCTTCC ACGTGGGGCA GTTCCAGGAC 1740
GACCGCCACT GCTCCCGGCT GCGCACCCTG GTGGCGCACT TTGCCCCCGC GCAGGTGCTC 1800
TTCGAGAGGG GGAACCCGTC ACTGGAGACC CGCAAAATCC TCAAGTCGTC GCTGGCTTCG 1860
GCCATGCAGG AGGCGCTCAC GGCCAACACG CAGTTCTGGG ACGCGCAGAA GACCCTCAAG 1920
ACCCTGGCGG AAGAGGACTA CTTCAACGAG AGCGTCGGGA AGGACCAGGA GGCCGGCGGC 1980
AGCGTTTTAC CGAGCGTCCT GAAGAGCATG ACCTCCGAGA GCGACTCGCT AGGCCTCACC 2040
CCCAAGGAGG GCTACGAGCT GGCCCTCTCC GCCCTGGGCG GATGCATGTT CTACCTGAAG 2100
AAGTGCTTCG TCGACCACGA GCTGCTCTCC ATGGCCAACT TCGAGGAGTA CGTCCCCGTG 2160
GACGTCGAGA TGGAGAAGGC CGCCGGCTCC GCCTCCAGCT TCTTCTCCCA GACGCGTCAG 2220
CGCGTGGTGC TGGACGGGGT GACCCTGGCC AACCTGGAGA TCCTCCAGAA CGGCACGGGG 2280
GGAACGGAGG GCACCCTGTT GGAGCGCCTG GACACCTGCT CCACGCCGTT CGGGAAGAGG 2340
CTCCTCAAGC AGTGGCTCTG CGCGCCGCTC TGCAACCCCA CCTCCATCGA GGCCCGGCTG 2400
GACGCCCTGG AGGACCTGAT GGGAGCCCGG GGCGAAGCCT CGGAGGCCTC GGAGCTGCTG 2460
AAGAAGCTGC CCGACCTGGA GCGCCTCCTC AGCAAGATCC ACAGCATCGG CACGCCGCTC 2520
AAGGGCCAGG ACCACCCCGA CAGCCGGGCC GTGCTCTACG AGGAGGTCAC CTACAGCAAG 2580
CGCAAGATAG CCGACTTCCT CTCGGCCCTG GAGGGCTTCA AAACCATGCA GGAGATCATC 2640
TCCGGCTTCG CCAAGGTCTC CGGGGAGTTT CGGTCAGCGC TGCTCCGCCA GGTGGTGAAC 2700
CTGAAGGCCG GGCGGGGCGG CCTGTTCCCC GACCTCTCCG GGGAGCTCCG GCGGTGGGAG 2760
ACGGCCTTCG ACCACCAGAA GGCCCGGACG ACCGGCGTCA TCACCCCCAA GGCGGGCTTC 2820
GACCCCGAGT TCGACCAGGC GCTCGGCGAG ATCAAGACCT GCGAGAGAGA GCTTCAGGAC 2880
TACCTGGACC GGCAGAAGAA GCGGCTGGGC TGCAAGAGCA TGACCTTCTG GGGCACGGGC 2940
CGCAACCGCT ACCAGATGGA GGTGCCCGAG AGCGTCAGCA TCCCCGAGGA GTACGAGGTG 3000
AAGTCCACCA AGAAGGGCTG GAAGCGCTAC GTGACCACGG AGTCGGAGGC CCTGTTCGCC 3060
GAGCTGCAGG GCTATGAGGA GAAGAGGGAC GCCGCGCTCA AGGACTGCAT GCGGAGGCTC 3120
TTCTACAACT TTGATAAGAA CTACAGAGAC TGGCAGACGG GCGTGGAGTG CATGGCGGTG 3180
CTAGACGTGC TGCTCAGCCT GATGCGCTAC AGCCAGGGGG GCGACGGGCC CATGTGCCGG 3240
CCCAGGTTGG TGCTCCCGGA GGGGGCCGCA GAGCGCTCGG CTCCCTTCCT GGACCTGCGT 3300
GGCTCGCGCC ATCCCTGCGT CACCAAGACC TTCTTCGGAG ACGACTTCAT CCCCAACGAC 3360
ATCTACATCA ACTGCCCCGA GGAAGAGGAT GAGGAGAAGG AGGGAGGGGC GGCCGGCCAT 3420
GCCCCCTGTG TCCTCGTCAC GGGGCCCAAC ATGGGCGGCA AGTCCACCCT CATGAGACAG 3480
TGTGGCCTGG TGCTGATCCT GGCCCAGCTG GGCTGCTACG TGCCCGCCGA CAGCCTGCAG 3540
TTCACCCCCG TGGACCGGGT CTTCACCCGC CTGGGCGCCT CGGATCGCAT CATGGCCGGC 3600
GAGAGTACGT TCTTCGTGGA GCTGAGTGAG ACGGCCAGTA TCCTGCACCA CGCCACTGAA 3660
CACTCCCTAG TGCTCCTCGA TGAACTGGGC AGGGGCACAG CCACTTATGA CGGCACCGCC 3720
ATCGCCAGTG CCGTGGTGAA GGAGCTGGCG GAGAAGGTCG GCTGCCGCAC CCTCTTCTCC 3780
ACCCACTACC ACTCTCTGGT GGAGGACTAC GCCAACAACC CAGCGGTGCG GCTGGGCCAC 3840
ATGGCCTGCA TGGTGGAGAA CGAATGCGAG GATCCCAGCC AGGAGACCAT CACCTTCCTC 3900
TACAAGTTCA TCGCTGGGGC CTGTCCAAAG AGCTACGGCT TCAACGCAGC CCGCCTGGCC 3960
AACCTGCCCG AAGACGTGAT CCAGGCCGGG CACCAGAAGG CCAGGGAGTT TGAGAAGAGT 4020
ACCATGAGCC TCAGGATCTT CAGGAAGCTC TGCAAATTTG CTGAAGATGC CACTCTGGGA 4080
AAAGCTCACT TTGTTTCGCT GGTTCAAACG ATCAGCAGTG TC 4123
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 76 0.0 1972
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 77 0.0 1943
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 76 0.0 1942
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 76 0.0 1939
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 76 0.0 1919
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 74 0.0 1890
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 74 0.0 1838
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 69 0.0 1744
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 74 0.0 1683
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 64 0.0 1615
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 65 0.0 1577
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 62 0.0 1512
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 61 0.0 1494
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 60 0.0 1490
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 60 0.0 1484
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 60 0.0 1481
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 61 0.0 1478
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 60 0.0 1476
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 59 0.0 1476
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 60 0.0 1475
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 59 0.0 1473
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 60 0.0 1469
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 61 0.0 1469
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 60 0.0 1469
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 62 0.0 1468
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 60 0.0 1467
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 61 0.0 1466
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 60 0.0 1466
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 59 0.0 1464
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 61 0.0 1461
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 61 0.0 1460
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 60 0.0 1459
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 61 0.0 1459
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 59 0.0 1458
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 60 0.0 1456
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 59 0.0 1431
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 67 0.0 1409
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 68 0.0 1402
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 67 0.0 1397
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 69 0.0 1391
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 64 0.0 1368
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 64 0.0 1364
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 64 0.0 1362
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 59 0.0 1353
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 63 0.0 1352
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 58 0.0 1347
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 65 0.0 1300
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 67 0.0 1152
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 51 0.0 982
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 67 0.0 907
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 60 0.0 863
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 69 0.0 737
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 60 0.0 699
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 68 0.0 694
WERAM-Met-0160 AES82183 Medicago truncatula 41 5e-179 626
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 62 2e-152 538
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 61 6e-144 509
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 78 2e-130 465
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 62 2e-110 398
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 58 8e-94 343
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 63 1e-41 170
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 34 6e-12 71.2
WERAM-Fia-0085 ENSFALP00000006989.1 Ficedula albicollis 33 4e-11 68.9
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 33 4e-11 68.6
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 42 4e-10 65.5
Created Date 25-Jun-2016