WERAM Information

Tag Content
WERAM ID WERAM-Eqc-0026
Ensembl Protein ID ENSECAP00000004388.1
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSECAG00000005949.1 ENSECAT00000006218.1 ENSECAP00000004388.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 3.30e-23 81.8 7 68
Organism Equus caballus
Domain Profile
  Me_Reader PWWP
              PWWP.txt  1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63
                          +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ +++V+FF+++++r wv+++ l+py++
  ENSECAP00000004388.1  7 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTG 68
                          69***************************.*******************************86 PP
Protein Sequence
(Fasta)		SSCDFSPGDL VWAKMEGYPW WPCLVYNHPF DGTFIREKGK SVRVHVQFFD DSPTRGWVSK 60
RLLKPYTGSK SKEAQKGGHF YSAKPEILRA MQRADEALNK DKIKRLELAV CDEPSEPEEE 120
EMEVGATYAS DKSEEDNEID SEEEVPPKVQ GSRRSSRQIK KRRVISDSES DIGGSDVEFK 180
PDAKEEGSSD EISSGVGDSD SEGLDSPVKV VPKRKRMVTG NGSLKKKTSR KEMPSATKRA 240
TSISSETKST LSAFSAPQNS ESQAHVSGGC DDGSRPTIWY HETLEWLKEE KRRDLHRRRR 300
DHPDFDASTL YVPEDFLNSC TPGMRKWWQI KSQNFDLVIF YKVGKFYELY HMDALIGVSE 360
LGLVFMKGNW AHSGFPEIAF GRYSDSLVQK GYKVARVEQT ETPEMMEARC RKMAHISKHD 420
RVVSYKQIKL FTGNLIISSP LAFLQFCLRS NFLFSIEFLV FDKYLSVLYF SESLYVYTSK 480
DFHLFSLSPN RHTCLALIYV SSQFVFLCFK NTATVNRIAS FCSSVPSSNN KESNLKSSPQ 540
LRCSKLVILF LIKIVLYQCA YHGLAPGLYQ VREINQYSIF LLYLLACPSI LLGAKSLRGE 600
ILGLKLKVIS PFTTSAIMKT CHSDDLFSVM NALKHFMYCA VGYDDSLIRV PTVRKRLLCL 660
KSKLSVEVVL RNLKNDELTL IFSLTDVLLC LANYSRGGDG PMCRPLILLP EEDTPPFLYL 720
KGSRHPCITK TFFGDDFIPT AFTRIGWIME EVVDDFKSKI LKQVITLQTK NPEGRFPDLT 780
IELNRWDTAF DHEKARRTGL ITPKAGFDSD YDQALADIRE NEQSLLEYLE KQRSRIGCRT 840
IVYWGIGRNR YQLEIPENFI TRNLPEEYEL KSTKKGCKRY WTKTIEKKLA NLINAEERRD 900
VSLKDCMRRL FYNFDKNYKD WQAAVECIAV LDVLLCLANY SRGGDGPMCR PLILLPEEDT 960
PPFLYLKGSR HPCITKTFFG DDFIPNDILI GCEEEEEENG KAYCVLVTGP NMGGKSTLMR 1020
QAGLLAVMAQ MGCYVPAEVC RLTPIDRVFT RLGASDRIMS GESTFFVELS ETASILTHAT 1080
AHSLVLVDEL GRGTATFDGT AIANAVVKEL AENIKCRTLF STHYHSLVED YSQNVAVRLG 1140
HMACMVENEC EDPSQETITF LYKFIKGACP KSYGFNAARL ANIPEEVIQK GHRKAREFEK 1200
MTQSLRLFRE VCLASERSSV DAEGVHKLLT LIQEL 1235
Nucleotide Sequence
(Fasta)		AGTTCTTGTG ACTTCTCACC AGGTGATTTG GTTTGGGCCA AGATGGAGGG TTACCCCTGG 60
TGGCCTTGCT TGGTTTACAA CCACCCTTTT GATGGAACAT TCATCCGTGA GAAAGGGAAG 120
TCCGTCCGAG TTCATGTACA GTTTTTTGAT GACAGCCCAA CAAGGGGCTG GGTTAGCAAA 180
AGGCTATTAA AACCATATAC AGGTTCAAAA TCAAAGGAAG CCCAGAAAGG AGGTCACTTT 240
TACAGTGCAA AGCCTGAAAT ACTCAGAGCA ATGCAACGTG CAGATGAAGC CTTGAATAAA 300
GACAAGATTA AGAGGCTTGA ATTGGCGGTG TGTGATGAGC CCTCAGAACC AGAGGAGGAG 360
GAGATGGAGG TAGGTGCAAC TTACGCATCT GATAAGAGTG AAGAAGATAA TGAAATTGAT 420
AGTGAAGAGG AAGTACCACC TAAAGTGCAA GGATCTAGGC GAAGTAGCCG CCAAATAAAG 480
AAACGAAGAG TAATATCAGA CTCTGAAAGC GACATTGGTG GCTCCGATGT GGAATTCAAG 540
CCAGATGCTA AGGAGGAAGG AAGCAGTGAT GAAATAAGCA GTGGAGTAGG GGATAGTGAC 600
AGTGAAGGCC TGGACAGCCC TGTCAAAGTT GTTCCAAAGC GGAAGAGAAT GGTTACCGGA 660
AATGGCTCTC TGAAAAAGAA AACTTCAAGG AAGGAAATGC CTTCAGCCAC CAAACGAGCA 720
ACTAGCATTT CATCAGAAAC CAAGAGTACT TTGAGTGCTT TCTCTGCCCC TCAAAATTCT 780
GAATCTCAAG CCCACGTTAG TGGAGGATGT GATGATGGTA GTCGCCCCAC TATCTGGTAT 840
CATGAAACAT TAGAATGGCT TAAGGAGGAA AAGAGAAGAG ATCTGCACAG GAGGCGACGT 900
GATCATCCTG ACTTTGATGC ATCCACACTC TATGTGCCTG AGGATTTTCT TAATTCTTGT 960
ACTCCTGGGA TGAGGAAGTG GTGGCAGATT AAGTCTCAGA ACTTTGATCT TGTCATATTT 1020
TATAAGGTGG GGAAGTTCTA TGAGCTGTAC CATATGGATG CCCTTATTGG AGTCAGTGAA 1080
CTAGGTCTGG TATTCATGAA AGGCAACTGG GCTCATTCTG GTTTCCCTGA AATTGCATTT 1140
GGCCGATATT CAGATTCCCT GGTCCAGAAG GGTTATAAAG TAGCACGTGT GGAACAGACC 1200
GAGACCCCAG AAATGATGGA GGCAAGATGC CGAAAGATGG CACATATATC TAAGCATGAT 1260
AGAGTGGTTT CCTATAAGCA AATTAAGTTG TTTACTGGAA ACTTAATTAT TAGTAGCCCT 1320
CTGGCCTTTC TTCAATTTTG TTTGAGATCA AATTTCCTTT TTTCAATTGA ATTTTTAGTA 1380
TTTGATAAAT ACTTATCAGT GCTGTATTTC AGTGAATCTC TTTACGTGTA TACTTCAAAA 1440
GATTTTCATC TTTTTTCTCT TAGCCCAAAT CGTCACACTT GCCTAGCCCT AATTTATGTC 1500
TCCTCTCAGT TTGTTTTTTT GTGTTTTAAA AATACAGCGA CTGTAAATAG AATAGCATCC 1560
TTCTGTTCGA GTGTGCCATC TTCAAACAAT AAGGAGAGTA ATTTAAAATC CTCCCCTCAG 1620
CTTAGGTGTT CAAAATTGGT GATTTTATTT CTTATTAAGA TTGTATTATA TCAGTGTGCC 1680
TATCATGGGT TAGCTCCAGG ATTATACCAA GTAAGAGAGA TTAATCAATA CAGCATCTTT 1740
CTGCTGTATC TTTTAGCTTG CCCAAGCATT CTTCTGGGGG CTAAGTCTTT GAGGGGAGAG 1800
ATTCTTGGGC TGAAATTGAA AGTTATTTCT CCTTTCACTA CAAGTGCTAT AATGAAAACA 1860
TGTCACTCTG ATGACTTATT TTCAGTAATG AATGCATTAA AGCATTTTAT GTATTGTGCA 1920
GTTGGTTATG ATGATTCACT AATAAGAGTG CCTACTGTTA GGAAAAGGCT GCTATGTCTA 1980
AAAAGCAAAC TTTCTGTAGA AGTTGTGCTT AGAAACCTCA AAAATGATGA GCTCACTTTA 2040
ATCTTCTCTT TAACAGATGT CTTATTGTGC CTCGCTAACT ATAGTCGAGG GGGTGATGGA 2100
CCTATGTGTC GTCCACTGAT TCTGCTGCCA GAAGAAGACA CTCCTCCCTT CTTATACCTT 2160
AAAGGATCAC GCCATCCCTG CATTACGAAG ACTTTTTTTG GAGATGACTT TATTCCTACC 2220
GCCTTTACTA GGATAGGCTG GATTATGGAA GAAGTTGTTG ATGACTTTAA GTCTAAAATT 2280
CTTAAGCAGG TCATAACTCT GCAGACAAAA AATCCTGAAG GCCGTTTTCC TGATTTGACT 2340
ATAGAACTGA ATCGATGGGA CACAGCCTTT GACCATGAAA AGGCTCGAAG GACTGGACTG 2400
ATTACTCCCA AAGCAGGATT TGACTCTGAT TATGACCAAG CTCTTGCTGA CATAAGAGAA 2460
AATGAACAGA GCCTCCTGGA ATACTTGGAG AAACAGCGCA GTAGAATTGG CTGTAGGACC 2520
ATAGTCTACT GGGGGATTGG GAGGAACCGT TACCAGTTGG AAATTCCAGA GAATTTCATC 2580
ACTCGTAATT TGCCAGAAGA GTATGAGTTG AAATCCACGA AGAAGGGCTG TAAACGATAC 2640
TGGACTAAAA CTATTGAGAA AAAGTTGGCT AATCTGATAA ACGCTGAAGA ACGGAGAGAC 2700
GTATCATTGA AAGACTGCAT GCGGCGACTA TTCTATAACT TTGATAAAAA TTACAAGGAC 2760
TGGCAGGCTG CTGTAGAGTG CATCGCAGTG TTAGATGTCT TATTGTGCCT CGCTAACTAT 2820
AGTCGAGGGG GTGATGGACC TATGTGTCGT CCACTGATTC TGCTGCCAGA AGAAGACACT 2880
CCTCCCTTCT TATACCTTAA AGGATCACGC CATCCCTGCA TTACGAAGAC TTTTTTTGGA 2940
GATGACTTTA TTCCTAATGA CATTCTAATA GGCTGTGAGG AAGAAGAGGA GGAAAATGGC 3000
AAAGCTTACT GTGTGCTTGT TACTGGACCA AATATGGGGG GCAAGTCTAC ACTCATGAGA 3060
CAGGCTGGCC TATTAGCTGT AATGGCCCAG ATGGGTTGTT ATGTACCTGC TGAAGTGTGT 3120
AGGCTCACAC CAATTGATAG AGTCTTTACT AGACTTGGTG CCTCAGACAG AATAATGTCA 3180
GGTGAAAGTA CATTTTTTGT TGAATTGAGT GAAACTGCTA GTATACTTAC ACATGCAACA 3240
GCACATTCTC TGGTGCTTGT GGATGAATTA GGAAGAGGTA CTGCAACATT TGATGGGACA 3300
GCAATAGCAA ATGCAGTTGT TAAAGAACTT GCTGAGAATA TAAAGTGTCG TACACTGTTT 3360
TCTACCCACT ACCATTCATT GGTTGAAGAT TATTCTCAAA ATGTTGCAGT GCGCCTAGGA 3420
CACATGGCAT GTATGGTAGA AAATGAATGT GAAGATCCCA GCCAGGAGAC TATTACCTTC 3480
CTCTATAAAT TCATTAAGGG AGCTTGTCCT AAAAGTTATG GCTTTAATGC AGCAAGGCTT 3540
GCGAATATTC CAGAGGAGGT TATTCAAAAA GGACATAGAA AAGCAAGAGA ATTTGAGAAG 3600
ATGACTCAGT CACTGCGATT ATTTCGGGAA GTTTGCCTGG CTAGTGAGAG GTCATCTGTA 3660
GATGCTGAAG GTGTCCATAA GTTGCTGACT TTGATTCAGG AATTGTAGAC TACATTGGAA 3720
GCTTTGCATT GACTTGACAA AGGTGGTAAA TTCAGACAAC ATTATGATCT AATAAACTTT 3780
ATTTTTTAAA A 3792
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 97 0.0 984
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 96 0.0 979
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 96 0.0 978
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 96 0.0 972
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 95 0.0 972
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 96 0.0 972
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 95 0.0 971
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 95 0.0 971
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 96 0.0 971
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 95 0.0 970
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 95 0.0 967
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 95 0.0 967
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 95 0.0 966
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 94 0.0 959
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 94 0.0 959
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 94 0.0 959
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 93 0.0 957
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 94 0.0 954
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 94 0.0 952
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 93 0.0 951
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 95 0.0 949
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 91 0.0 937
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 97 0.0 937
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 94 0.0 933
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 88 0.0 923
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 88 0.0 922
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 91 0.0 919
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 87 0.0 907
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 84 0.0 874
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 84 0.0 873
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 78 0.0 807
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 78 0.0 801
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 97 0.0 798
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 76 0.0 788
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 76 0.0 788
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 74 0.0 779
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 74 0.0 772
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 73 0.0 761
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 74 0.0 752
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 71 0.0 732
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 70 0.0 720
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 68 0.0 716
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 70 0.0 714
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 69 0.0 713
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 67 0.0 711
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 70 0.0 703
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 68 0.0 697
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 67 0.0 692
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 62 0.0 633
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 88 1e-176 618
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 63 7e-171 599
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 95 2e-166 584
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 81 1e-164 578
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 53 2e-142 504
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 96 4e-118 424
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 88 9e-118 422
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 93 2e-114 412
WERAM-Met-0160 AES82183 Medicago truncatula 43 4e-106 384
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 95 4e-93 340
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 92 3e-69 261
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 57 6e-20 97.8
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 8e-12 70.9
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 2e-11 69.3
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 35 3e-11 68.9
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 35 7e-11 67.8
WERAM-Sei-0090 Si024584m Setaria italica 35 7e-06 51.2
Created Date 25-Jun-2016