WERAM Information

Tag Content
WERAM ID WERAM-Chh-0108
Ensembl Protein ID ENSCHOP00000011885.1
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCHOG00000013424.1 ENSCHOT00000013462.1 ENSCHOP00000011885.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 3.10e-23 81 89 150
Organism Choloepus hoffmanni
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ +++V+FF+++++r wv+++ l+py++
  ENSCHOP00000011885.1  89 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKSVRVHVQFFDDSPTRGWVSKRLLKPYTG 150
                           69***************************.*******************************86 PP
Protein Sequence
(Fasta)		MSRQSTQYSF FPKSPELNNA NKAPVRASSK GSAAITGASP SSSRDAAWSD SRPGPLAGSA 60
SPPETKNLNG GLRRPAALAV PTSFCDFSPG DLVWAKMEGY PWWPCLVYNH PFDGTFIREK 120
GKSVRVHVQF FDDSPTRGWV SKRLLKPYTG SKSKEAQKGG HFYSSKPEIL RAMQRADEAL 180
NKDKIKRLEL AVCDEPSEPE EEEIEXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 240
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 300
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 360
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 420
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 480
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 540
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 600
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 660
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXGT 720
LAKANQRMVL DAVTLNNLEI FLNGTNGSTE GTLERIDTCH TPFGKRLLKQ WLCTPLCSPY 780
PINDRLDAIE DLMVVPDKIS EVVDLLKKLP DLERLLSKIH NVGSPLKSQN HPDSRAIMYE 840
ETTYSKKKII DFLSALEGFK VMCKIIGVME EVVDDFESKI LKQVITLQTK NPEGRFPDLT 900
LELNRWDTAF DHEKARKTGL ITPKAGFDSD YDQALADIRE NEQSLLEYLE KQRTRIGCRT 960
IVYWGIGRNR YQLEIPESFT TRNLPEEYEL KSTKKGCKRY WTKTIEKKLA SLINAEERRD 1020
VSLKDCMRRL FYNFDKNYRD WQSAVECIAV LXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 1080
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 1140
AGLLAVMAQM GCYVPAEVCR LTPIDRVFTR LGASDRIMSG ESTFFVELNE TASILMHATA 1200
HSLVLVDELG RGTATFDGTA IASAVVKELA ETIRCRTLFS THYHSLVEDY SQDVAVRLGH 1260
MACMVENECE DPSQETITFL YKFIKGACPK SYGFNAARLA NLPQEVIQKG HRKAREFEKM 1320
TQSLRLFREV CLISVKSTVD AEAVHKLLAL IKEL 1354
Nucleotide Sequence
(Fasta)		ATGTCGCGAC AGAGCACCCA GTACAGCTTC TTCCCCAAGT CTCCTGAGCT GAATAATGCC 60
AACAAGGCCC CGGTGAGGGC CTCAAGCAAA GGCAGCGCCG CCATCACCGG GGCCTCTCCT 120
TCCTCCAGTA GGGATGCGGC CTGGAGTGAC TCTAGGCCTG GGCCCTTGGC GGGCTCCGCT 180
TCGCCGCCTG AGACGAAGAA CCTCAACGGA GGGCTTCGAA GGCCGGCAGC GCTTGCGGTC 240
CCCACCAGTT TTTGTGACTT CTCACCAGGT GATTTGGTTT GGGCCAAGAT GGAGGGTTAC 300
CCTTGGTGGC CTTGCCTGGT TTACAATCAT CCGTTTGATG GAACATTCAT TCGTGAAAAA 360
GGAAAATCAG TCCGTGTTCA TGTACAGTTT TTCGATGACA GCCCAACAAG GGGCTGGGTT 420
AGCAAAAGGC TATTAAAACC ATATACAGGT TCCAAATCAA AGGAAGCCCA GAAGGGAGGT 480
CATTTTTATA GTTCAAAGCC TGAAATACTC AGGGCAATGC AACGTGCAGA TGAAGCCTTG 540
AATAAAGACA AGATTAAGAG GCTTGAATTA GCAGTGTGTG ATGAGCCCTC AGAACCAGAA 600
GAAGAGGAGA TTGAGNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 660
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 720
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 780
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 840
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 900
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 960
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1020
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1080
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1140
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1200
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1260
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1320
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1380
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1440
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1500
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1560
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1620
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1680
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1740
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1800
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1860
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1920
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 1980
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2040
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2100
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNCTGGTACT 2160
CTTGCGAAAG CTAACCAACG AATGGTGCTA GATGCAGTGA CATTGAACAA CTTGGAGATT 2220
TTTCTGAATG GGACAAATGG TTCTACTGAA GGGACCCTAG AGAGGATTGA CACTTGCCAT 2280
ACACCCTTTG GTAAGCGGCT TTTAAAGCAA TGGCTTTGTA CCCCACTCTG TAGCCCTTAC 2340
CCTATCAATG ATCGCCTAGA TGCCATAGAA GACCTCATGG TTGTGCCTGA CAAAATCTCT 2400
GAGGTTGTCG ATCTTCTAAA GAAACTTCCA GACCTTGAGA GGCTGCTGAG CAAAATTCAT 2460
AATGTGGGGT CTCCCCTGAA GAGCCAGAAC CACCCAGATA GCAGGGCCAT AATGTATGAA 2520
GAAACTACAT ACAGCAAAAA AAAGATCATT GATTTTCTTT CTGCTCTGGA AGGATTCAAA 2580
GTAATGTGTA AAATTATAGG GGTTATGGAA GAAGTTGTTG ATGACTTTGA GTCTAAAATT 2640
CTTAAGCAGG TCATTACTCT CCAGACAAAA AATCCTGAAG GCCGTTTTCC TGATTTGACT 2700
CTTGAATTGA ACCGATGGGA CACAGCCTTT GACCATGAAA AGGCTCGAAA GACTGGACTG 2760
ATTACTCCCA AAGCAGGATT TGACTCTGAT TACGACCAAG CCCTTGCTGA CATAAGAGAA 2820
AATGAACAGA GCCTCCTGGA GTACTTAGAG AAGCAGCGCA CTCGAATTGG CTGCAGAACC 2880
ATAGTCTACT GGGGGATTGG TCGGAACCGT TACCAGCTGG AAATTCCAGA GAGTTTTACT 2940
ACCCGTAATT TGCCAGAAGA ATACGAGTTG AAATCTACCA AGAAAGGCTG TAAACGATAC 3000
TGGACCAAAA CTATTGAGAA GAAGTTGGCT AGTCTGATAA ATGCTGAAGA AAGGCGAGAT 3060
GTGTCACTGA AGGACTGCAT GCGGCGACTG TTCTATAACT TTGACAAAAA TTACAGGGAC 3120
TGGCAGTCTG CTGTGGAGTG TATCGCAGTG TTGGNNNNNN NNNNNNNNNN NNNNNNNNNN 3180
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3240
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3300
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3360
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 3420
GCTGGCTTAT TAGCTGTAAT GGCCCAAATG GGTTGTTATG TACCTGCTGA AGTATGTAGG 3480
CTCACACCGA TTGATAGAGT GTTTACTAGA CTTGGTGCCT CGGATAGAAT AATGTCAGGT 3540
GAAAGTACAT TTTTTGTTGA GTTGAATGAA ACTGCCAGTA TACTTATGCA TGCAACAGCA 3600
CATTCTCTGG TGCTTGTGGA TGAATTAGGA AGAGGTACTG CAACCTTTGA TGGGACAGCA 3660
ATAGCAAGTG CAGTTGTTAA AGAACTTGCT GAAACTATAA GGTGTCGTAC ATTGTTTTCT 3720
ACTCACTACC ATTCATTAGT AGAAGATTAT TCTCAAGATG TTGCTGTGCG TCTAGGACAC 3780
ATGGCATGCA TGGTAGAAAA TGAATGTGAA GATCCCAGCC AGGAGACTAT TACCTTCCTT 3840
TATAAGTTCA TTAAGGGAGC TTGCCCTAAA AGCTATGGCT TTAATGCTGC AAGGCTTGCT 3900
AATCTTCCAC AGGAAGTTAT TCAAAAGGGA CACAGAAAAG CAAGAGAATT TGAGAAGATG 3960
ACTCAGTCAC TGCGATTATT TCGGGAAGTT TGCCTGATTA GTGTAAAGTC GACTGTAGAT 4020
GCTGAAGCTG TCCATAAGTT GTTGGCTTTG ATTAAGGAGT TA 4063
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 96 0.0 641
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 96 0.0 634
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 95 0.0 632
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 95 1e-180 632
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 94 3e-180 630
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 94 3e-180 630
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 94 3e-180 630
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 94 6e-180 629
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 94 1e-179 628
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 94 4e-179 626
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 93 4e-179 626
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 93 7e-179 625
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 93 1e-178 625
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 93 2e-178 624
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 93 2e-178 624
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 93 3e-178 624
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 93 5e-178 623
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 93 1e-177 621
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 93 2e-177 621
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 92 3e-177 620
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 92 5e-177 619
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 91 6e-177 619
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 91 1e-175 615
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 92 3e-175 613
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 92 3e-174 610
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 91 5e-170 596
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 90 7e-169 592
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 88 1e-168 591
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 89 1e-168 591
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 88 5e-168 589
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 90 1e-167 588
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 94 2e-167 587
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 84 3e-160 563
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 84 8e-159 559
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 73 2e-142 504
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 73 4e-141 500
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 72 1e-138 492
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 72 2e-138 491
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 71 1e-137 488
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 70 9e-136 482
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 69 7e-134 476
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 72 2e-129 461
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 66 5e-128 457
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 67 3e-122 437
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 64 8e-121 433
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 66 8e-121 432
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 64 4e-120 430
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 64 1e-118 426
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 63 2e-118 425
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 63 6e-118 423
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 94 1e-116 419
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 63 5e-116 417
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 93 1e-114 412
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 63 3e-114 411
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 58 4e-111 400
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 91 3e-110 397
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 88 2e-98 358
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 92 3e-96 351
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 45 4e-79 294
WERAM-Met-0160 AES82183 Medicago truncatula 55 1e-50 199
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 36 2e-18 93.2
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 4e-12 72.0
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 9e-12 70.9
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 31 5e-11 68.6
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 34 1e-10 67.4
WERAM-Sei-0090 Si024584m Setaria italica 36 2e-06 53.1
Created Date 25-Jun-2016