WERAM Information

Tag Content
WERAM ID WERAM-Bot-0012
Ensembl Protein ID ENSBTAP00000001867.5
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSBTAG00000001424.5 ENSBTAT00000001867.5 ENSBTAP00000001867.5
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 2.30e-23 82.2 91 152
Organism Bos taurus
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ +++V+FF+++++r wv+r+ l+py++
  ENSBTAP00000001867.5  91 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKSARVHVQFFDDSPTRGWVSRRLLKPYTG 152
                           69***************************.*******************************86 PP
Protein Sequence
(Fasta)		MSRQSTLFSF FPKSPAVNNA NKAPVRASSG SSAAAAATGA SPSPGGDAAW NEAGPEPLAG 60
TTSRAEARNL NGGLRKSASP AVPASSCDFS PGDLVWAKME GYPWWPCLVY NHPFDGTFIR 120
EKGKSARVHV QFFDDSPTRG WVSRRLLKPY TGSHSKEAQK GGHFYSAKPE ILRAMQRADE 180
ALNKDKIKRL ELAVCDEPSE PEEEEETEVG ATYTSDKSEE ENDIESEEEV RPKVQGSRRS 240
SRQIKKRRVI SDSESDVGGS DVEFKPDTKE EASSDEISSG VGDSDSEGLD TPVKVAPKRK 300
RMVTGNGSLK RKSSRKEMPS ATKRATGISS ETKNTLSAFS VPQNSEPQAH ISGGCDDSNR 360
PTVWYHETLE WLKEEKRRDV HRRRPDHPDF DASTLYVPED FLNSCTPGMR KWWQIKSQNF 420
DLVIFYKVGK FYEMYHMDAL IGVSELGLVF MKGNWAHSGF PEIAFGRYSD SLVQKGYKVA 480
RVEQTETPEM MEARCRKMAH ISKYDRVVRR EICRIITKGT QTYSVLEGDP SENYSKYLLS 540
LKEKEEESSG HTRVYGVCFV DTSLGRFFIG QFSDDRHCSR FRTLVAHYPP VQVLFEKGNL 600
SMDTKMILKS SLSSSLQEGL IPGSQFWDAA KTLRTLLEEG YFIDKLNEDG GVMLPQVLKG 660
MTSESDSIGL TPGEKSELAL SALGGCVFYL KKCLIDQELL SMANFEEYVP LDSDMVHATR 720
PGAVFAKANQ RMVLDAVTLN NLEIFLNGTN GSTEGTLLEK IDTCHTPFGK RLLKQWLCAP 780
LCNPHAINDR LDAIEDLMVV PDKISEVVDL LKKLPDLERL LSKIHNVGSP LKSQNHPDSR 840
AIMYEETTYS KKKIIDFLSA LEGFKVICKI IGIMEEVIDD FKSKILKQVL TLQTKSPEGR 900
FPDLTSELNR WDTAFDHEKA RKTGLITPKA GFDSDYDQAL ADIRENEQSL LEYLEKQRSR 960
IGCRTIVYWG IGRNRYQLEI PENFITRNLP EEYELKSTKK GCKRYWTKTI EKKLGNLINA 1020
EERRDASLKD CMRRLFYNFD KNYKDWQAAV ECIAVLDVLL CLTNYSRGGD GPMCRPIILL 1080
PEEDTPPFLD LKGSRHPCIT KTFFGDDFIP NDILIGCEEE EEENGKAYCV LVTGPNMGGK 1140
STLMRQAGLL AIMAQMGCYV PAEVCRLTPI DRVFTRLGAS DRIMSGESTF FVELSETASI 1200
LTHATAHSLV LVDELGRGTA TFDGTAIANA VVKELAENIK CRTLFSTHYH SLVEDYSQNV 1260
AVRLGHMACM VENECEDPSQ ETITFLYKFI KGACPKSYGF NAARLANLPE EVIQKGHRKA 1320
REFEKMTQSL RLFREVCLAS ERSTVDADAV HKLLTLIEEL
Nucleotide Sequence
(Fasta)		ATGTCGCGAC AGAGCACGCT GTTTAGCTTC TTCCCTAAGT CTCCAGCCGT GAATAATGCC 60
AACAAAGCCC CCGTCAGAGC CTCAAGTGGA AGCAGCGCCG CCGCCGCTGC CACCGGGGCC 120
TCCCCTTCCC CAGGCGGGGA TGCGGCCTGG AACGAGGCCG GGCCTGAGCC CCTAGCGGGT 180
ACCACGTCGC GGGCCGAGGC CAGGAACCTC AACGGAGGGC TGCGGAAGTC GGCATCCCCT 240
GCGGTCCCCG CCAGTTCTTG TGACTTCTCA CCAGGTGATT TGGTTTGGGC CAAGATGGAG 300
GGTTACCCTT GGTGGCCTTG CCTGGTTTAC AACCACCCTT TTGATGGAAC ATTCATCCGT 360
GAGAAAGGAA AGTCTGCCCG AGTTCATGTA CAGTTTTTTG ATGACAGCCC AACACGGGGC 420
TGGGTTAGCA GAAGGCTATT AAAGCCATAT ACAGGTTCAC ATTCAAAGGA AGCCCAGAAA 480
GGAGGTCATT TTTATAGTGC AAAGCCTGAA ATACTCAGAG CAATGCAACG TGCAGATGAA 540
GCCTTGAATA AAGACAAGAT TAAGAGGCTT GAGTTGGCAG TATGTGATGA GCCCTCAGAG 600
CCAGAGGAGG AAGAAGAGAC GGAGGTAGGT GCCACTTACA CATCAGATAA GAGTGAAGAG 660
GAAAATGACA TTGAGAGTGA AGAGGAAGTG AGGCCAAAGG TGCAAGGATC CAGACGAAGT 720
AGCCGACAAA TAAAAAAACG AAGGGTCATA TCAGACTCTG AGAGTGACGT TGGTGGCTCT 780
GATGTGGAAT TCAAGCCAGA CACTAAGGAG GAAGCAAGCA GTGATGAAAT AAGCAGTGGC 840
GTGGGGGACA GTGATAGTGA AGGCCTGGAC ACCCCCGTCA AAGTTGCTCC AAAGCGGAAG 900
AGAATGGTAA CTGGGAATGG TTCCCTCAAG AGGAAGAGTT CAAGGAAGGA AATGCCTTCA 960
GCCACCAAAC GAGCAACTGG CATTTCATCA GAAACCAAGA ATACTTTGAG TGCTTTCTCT 1020
GTCCCTCAAA ATTCTGAACC CCAAGCCCAC ATTAGTGGGG GATGTGATGA CAGTAATCGC 1080
CCCACTGTCT GGTATCATGA AACTTTAGAG TGGCTTAAGG AGGAAAAGAG AAGAGATGTG 1140
CACAGGAGGC GGCCTGATCA CCCTGATTTT GATGCATCCA CACTCTATGT GCCCGAGGAT 1200
TTCCTTAATT CCTGTACTCC TGGGATGAGG AAGTGGTGGC AAATTAAGTC TCAGAACTTT 1260
GATCTGGTCA TATTTTATAA AGTGGGGAAG TTTTATGAGA TGTACCACAT GGATGCTCTT 1320
ATTGGGGTCA GTGAACTAGG GCTGGTATTC ATGAAAGGCA ACTGGGCCCA TTCTGGTTTC 1380
CCTGAAATTG CATTTGGCCG ATACTCAGAT TCCCTGGTCC AGAAGGGCTA TAAAGTAGCA 1440
CGAGTAGAAC AGACTGAGAC CCCAGAAATG ATGGAGGCAC GATGCCGAAA AATGGCACAC 1500
ATATCTAAGT ATGACAGAGT GGTGCGGAGG GAGATCTGTA GGATCATTAC GAAGGGTACA 1560
CAGACCTACA GTGTGCTGGA AGGTGACCCC TCGGAGAACT ACAGTAAATA CCTTCTTAGC 1620
CTCAAAGAGA AAGAAGAGGA GTCTTCTGGC CACACTCGCG TGTATGGAGT ATGCTTTGTT 1680
GATACCTCTC TAGGGAGGTT CTTCATAGGT CAGTTTTCAG ATGATCGCCA TTGTTCCAGG 1740
TTTAGGACTT TAGTGGCACA CTATCCTCCA GTACAAGTCT TATTTGAGAA GGGAAATCTC 1800
TCAATGGATA CTAAGATGAT TCTCAAGAGT TCATTATCCT CTTCTCTTCA GGAAGGTCTG 1860
ATACCGGGCT CCCAGTTTTG GGATGCAGCC AAAACTTTGA GAACTCTCCT TGAAGAAGGA 1920
TATTTTATAG ACAAGTTAAA TGAGGACGGT GGGGTGATGC TACCCCAGGT GCTTAAAGGT 1980
ATGACCTCGG AGTCAGATTC TATTGGATTG ACACCAGGAG AGAAGAGTGA ATTAGCCCTC 2040
TCTGCTCTTG GTGGTTGTGT CTTCTACCTC AAAAAATGCC TTATTGATCA GGAGCTTTTA 2100
TCAATGGCTA ATTTTGAAGA ATATGTTCCC TTGGATTCTG ACATGGTCCA TGCTACAAGA 2160
CCTGGTGCTG TCTTTGCTAA AGCCAATCAA CGAATGGTGC TAGATGCTGT GACATTAAAC 2220
AACTTGGAGA TTTTTCTGAA TGGAACAAAC GGTTCTACTG AAGGGACCTT GTTAGAGAAG 2280
ATTGACACCT GCCATACTCC CTTTGGTAAA CGGCTCTTAA AGCAGTGGCT CTGTGCCCCA 2340
CTCTGTAACC CTCATGCGAT CAATGATCGC CTGGATGCCA TAGAAGACCT AATGGTTGTG 2400
CCTGACAAAA TCTCTGAGGT TGTAGACCTT CTTAAGAAGC TTCCAGACCT TGAGAGACTC 2460
CTGAGTAAAA TTCATAATGT TGGGTCTCCC CTCAAGAGCC AGAACCACCC AGATAGCAGG 2520
GCTATAATGT ATGAAGAAAC CACATACAGC AAAAAAAAGA TTATTGATTT TCTTTCTGCT 2580
CTGGAAGGAT TCAAAGTAAT ATGTAAAATT ATAGGGATTA TGGAAGAAGT CATTGATGAC 2640
TTTAAGTCTA AAATCCTCAA GCAGGTCCTT ACTCTGCAGA CAAAAAGTCC TGAAGGGCGC 2700
TTTCCTGATT TGACTTCAGA ACTGAACCGA TGGGATACAG CCTTTGACCA TGAAAAGGCT 2760
CGAAAGACTG GACTGATTAC TCCCAAAGCA GGATTTGACT CTGATTATGA CCAAGCTCTT 2820
GCTGACATAA GAGAAAATGA ACAGAGCCTC CTGGAATACT TGGAGAAACA GCGCAGTCGA 2880
ATTGGCTGTA GAACCATAGT TTACTGGGGA ATTGGTAGGA ATCGTTACCA GTTGGAAATT 2940
CCAGAGAATT TCATCACCCG TAATTTGCCA GAAGAATATG AGTTGAAATC CACCAAAAAG 3000
GGTTGTAAAC GATACTGGAC CAAAACAATT GAGAAGAAGT TGGGTAATCT GATAAACGCC 3060
GAAGAACGGA GAGACGCATC ATTAAAGGAC TGCATGAGGC GACTGTTCTA TAACTTTGAT 3120
AAAAATTACA AGGACTGGCA GGCTGCTGTG GAGTGCATCG CAGTGTTGGA TGTGTTATTG 3180
TGCCTGACCA ACTACAGTCG AGGGGGTGAT GGTCCTATGT GTCGTCCAAT AATTCTGTTG 3240
CCAGAAGAAG ATACTCCTCC CTTTCTAGAC CTTAAAGGAT CACGCCATCC CTGCATTACG 3300
AAGACTTTTT TTGGTGATGA CTTTATTCCT AATGACATTC TAATAGGCTG TGAGGAAGAG 3360
GAGGAGGAAA ATGGCAAAGC TTATTGTGTG CTTGTTACTG GACCAAATAT GGGAGGCAAG 3420
TCTACACTTA TGAGACAGGC TGGCCTATTA GCTATAATGG CCCAGATGGG CTGTTACGTA 3480
CCAGCTGAAG TGTGTAGGCT CACACCAATT GATAGAGTGT TTACTAGACT TGGTGCCTCA 3540
GACAGAATAA TGTCAGGTGA AAGTACATTT TTTGTTGAAT TGAGTGAAAC TGCCAGTATA 3600
CTTACACATG CAACAGCACA TTCTCTGGTG CTTGTGGATG AATTAGGAAG AGGTACCGCA 3660
ACATTCGATG GGACAGCAAT AGCAAACGCA GTTGTGAAAG AACTTGCTGA GAACATAAAG 3720
TGTCGTACGT TGTTTTCCAC CCACTACCAT TCATTAGTTG AAGATTATTC TCAAAATGTT 3780
GCAGTGCGCC TAGGACACAT GGCATGCATG GTAGAAAATG AATGTGAAGA TCCCAGCCAG 3840
GAGACAATTA CCTTCCTCTA TAAATTCATT AAAGGAGCCT GTCCGAAAAG CTATGGTTTT 3900
AATGCAGCAA GGCTTGCTAA TCTTCCAGAG GAGGTTATTC AAAAGGGACA TAGAAAAGCA 3960
AGAGAATTTG AGAAGATGAC TCAGTCACTG CGGTTATTTC GGGAGGTTTG TTTGGCTAGT 4020
GAAAGGTCTA CTGTGGATGC TGATGCTGTC CATAAGTTGC TGACTTTGAT TGAGGAATTA 4080
TAGACTACAT TGCAAGCTTT GAGTTCACTT TTGACAAAGG TGGTAAATTC AGACAACATT 4140
ATGATCTAAT AAACTTTATT TTTT 4165
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 97 0.0 2425
WERAM-Aim-0076 ENSAMEP00000006662.1 Ailuropoda melanoleuca 93 0.0 2372
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 92 0.0 2363
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 94 0.0 2351
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 92 0.0 2346
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 92 0.0 2345
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 92 0.0 2336
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 92 0.0 2331
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 92 0.0 2330
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 91 0.0 2326
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 91 0.0 2325
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 91 0.0 2321
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 92 0.0 2319
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 90 0.0 2316
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 91 0.0 2315
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 93 0.0 2299
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 94 0.0 2273
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 89 0.0 2269
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 90 0.0 2262
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 89 0.0 2253
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 94 0.0 2247
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 92 0.0 2240
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 86 0.0 2217
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 92 0.0 2182
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 84 0.0 2167
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 84 0.0 2140
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 77 0.0 1974
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 80 0.0 1972
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 71 0.0 1720
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 69 0.0 1715
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 70 0.0 1705
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 65 0.0 1703
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 71 0.0 1683
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 63 0.0 1662
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 84 0.0 1608
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 62 0.0 1606
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 73 0.0 1589
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 89 0.0 1546
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 60 0.0 1539
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 70 0.0 1435
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 67 0.0 1424
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 66 0.0 1422
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 67 0.0 1412
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 66 0.0 1402
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 59 0.0 1401
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 67 0.0 1384
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 66 0.0 1384
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 66 0.0 1364
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 91 0.0 1357
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 90 0.0 1256
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 59 0.0 1223
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 50 0.0 1004
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 96 0.0 982
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 90 0.0 963
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 91 0.0 834
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 90 0.0 800
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 79 0.0 680
WERAM-Met-0160 AES82183 Medicago truncatula 39 0.0 653
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 93 3e-178 624
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 96 8e-169 592
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 57 5e-21 101
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 48 2e-12 72.8
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 42 2e-11 69.7
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 32 2e-11 69.7
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 32 2e-10 66.6
WERAM-Sei-0090 Si024584m Setaria italica 35 2e-06 53.1
Created Date 25-Jun-2016