WERAM Information

Tag Content
WERAM ID WERAM-Aim-0076
Ensembl Protein ID ENSAMEP00000006662.1
Gene Name MSH6
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSAMEG00000006324.1 ENSAMET00000006943.1 ENSAMEP00000006662.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PWWP 2.00e-23 82.4 95 156
Organism Ailuropoda melanoleuca
Domain Profile
  Me_Reader PWWP
              PWWP.txt   1 agdLVwaKlkgYpwWPalvisppleakklktqeaeenkylVlFFgnkherawvkrkklvpyse 63 
                           +gdLVwaK++gYpwWP+lv+++p++++ + +++ ++ +++V+FF+++++r wv+r+ l+py++
  ENSAMEP00000006662.1  95 PGDLVWAKMEGYPWWPCLVYNHPFDGTFI-REKGKSVRVHVQFFDDSPTRGWVSRRLLKPYTG 156
                           69***************************.*******************************86 PP
Protein Sequence
(Fasta)		MSRQSTLYSF FPKSPALTNA NKASVRAPGG GGGAAAATGA SRSPGGDAAW SEAEPGPGPL 60
AGSASPPESR NINGGLRRSA APAVPASNSS CDFSPGDLVW AKMEGYPWWP CLVYNHPFDG 120
TFIREKGKSV RVHVQFFDDS PTRGWVSRRL LKPYTGSQSK EVQKGGHFYS SKPEILRAMQ 180
RADEALKKDK IERLKLAVCD EPSEPEEEEE MEVGATYSSD KSEEDNEIES EEEVQPKVQG 240
SRRSSRQIKK RRVISDSESD IGGSDVEFKP DAKEEGSSDE LSSGVGDSDS EGLESPVKVA 300
SKRKKMVTGN GSLKRKSSRK EMPLATKRST GISSETKSAL NAFSAPQNSE SQAHISGGCD 360
DSSRPTVWYH ETLEWLKEEK RRDLHRRRPD HPDFDASTLY VPEDFLNSCT PGMRKWWQIK 420
SQNFDLVIFY KVGKFYELYH MDALIGVNKL GLVFMKGNWA HSGFPEIAFG RYSDSLVQKG 480
YKVARVEQTE TPEMMEARCR KMAHISKYDR VVRREICRVI TKGTQTYSVL EGDPSENYSK 540
YLLSLKEKEE DSSGHTRVYG VCFVDTSLGK FLIGQFSDDR HCSRFRTLVA HYPPVQVLFE 600
KGNLSTETKM ILKGSLSSSL QEGLIPGSQF WDAAKTLRTL LEEGYFKEKL NEDSGVMLPQ 660
VLKGMTSESD SLGLTPGEKS ELALSALGGC VFYLKKCLID QELLSMANFE EYIPLDSDMV 720
SAAGPGAFFA KANQRMVLDA VTLSNLEIFM NGTNGSTEGT LLEKIDTCHT PFGKRLLKQW 780
LCAPLCSPYA INDRLDAIED LMVVPDKISD VVDLLKKLPD LERLLSKIHN VGSPLKSQNH 840
PDSRAIMYEE TTYSKKKIID FLSALEGFKV ICKIIEIMEE VVDNFKSKIL KQVVTLQTKT 900
PEGRFPDLTL ELNRWDTAFD HEKARKTGLI TPKAGFDSDY DQALADIKEN EQSLLEYLEK 960
QRSRIGCRTI VYWGIGRNRY QLEIPENFIT RNLPEEYELK STKKGCKRYW TKTIEKKLAN 1020
LINAEERRDT SLKDCMRRLF YNFDKNYKDW QSAVECIAVL DVLLCLANYS RGGDGPMCRP 1080
VILLPEEGTP PFLDLRGSRH PCITKTFFGD DFIPNDILIG CEEEEEENGK AYCVLVTGPN 1140
MGGKSTLMRQ AGLLAVMAQT GCYIPAEVCR LTPIDRVFTR LGASDRIMSG ESTFFVELSE 1200
TASILTHATA HSLVLVDELG RGTATFDGTA IANAVVKELA ENIKCRTLFS THYHSLVEDY 1260
SQNVAVRLGH MACMVENECE DPSQETITFL YKFIKGACPK SYGFNAARLA NLPEEVIQKG 1320
HRKAREFEKM TQSLRLFREV CLASERSTLD AEAVPKLLTL IKEL 1364
Nucleotide Sequence
(Fasta)		ATGTCGCGAC AGAGCACGCT GTACAGCTTC TTCCCCAAGT CTCCAGCGCT GACTAATGCT 60
AATAAGGCCT CGGTCAGGGC GCCAGGTGGA GGCGGCGGCG CCGCTGCTGC CACCGGGGCC 120
TCCCGTTCTC CCGGCGGGGA TGCGGCCTGG AGCGAGGCCG AGCCTGGGCC TGGGCCCTTG 180
GCAGGCTCCG CGTCGCCGCC GGAGTCGAGG AACATCAACG GAGGGCTGCG GAGATCTGCC 240
GCCCCTGCGG TCCCCGCCAG CAACAGTTCT TGTGACTTCT CACCAGGTGA TTTGGTTTGG 300
GCCAAGATGG AGGGTTACCC CTGGTGGCCT TGCCTGGTTT ACAACCACCC TTTTGATGGA 360
ACATTCATCC GTGAGAAAGG GAAGTCTGTT CGAGTTCATG TACAGTTTTT TGATGACAGC 420
CCAACAAGGG GCTGGGTTAG CAGAAGGCTA TTAAAGCCAT ATACAGGTTC ACAATCGAAG 480
GAAGTGCAAA AAGGAGGTCA TTTTTACAGT TCAAAGCCTG AAATACTCAG AGCAATGCAA 540
CGTGCAGATG AAGCCTTGAA AAAAGACAAG ATTGAGAGGC TAAAATTGGC GGTGTGTGAT 600
GAGCCCTCAG AACCAGAGGA AGAAGAAGAG ATGGAGGTAG GTGCAACTTA CTCATCAGAT 660
AAGAGTGAAG AAGATAATGA AATTGAAAGT GAAGAGGAAG TACAGCCTAA GGTCCAAGGA 720
TCTAGGCGAA GTAGCCGCCA AATAAAAAAA CGAAGGGTCA TATCAGACTC TGAGAGTGAC 780
ATTGGTGGCT CTGATGTGGA ATTCAAGCCA GATGCTAAGG AGGAAGGAAG TAGTGATGAA 840
CTAAGCAGTG GGGTGGGGGA TAGTGACAGT GAAGGCCTGG AGAGTCCTGT CAAAGTTGCT 900
TCAAAGCGGA AGAAAATGGT GACTGGAAAT GGCTCTCTCA AAAGGAAAAG TTCAAGGAAG 960
GAAATGCCCT TGGCCACCAA ACGATCAACT GGCATTTCAT CAGAAACCAA GAGTGCTTTG 1020
AATGCTTTCT CTGCCCCTCA AAATTCTGAA TCTCAAGCCC ACATTAGTGG AGGATGCGAT 1080
GATAGTAGTC GCCCCACTGT CTGGTATCAT GAAACTTTAG AGTGGCTCAA GGAGGAAAAG 1140
AGAAGAGATC TACACAGGAG GCGACCTGAT CACCCTGATT TTGATGCATC CACACTCTAT 1200
GTTCCTGAGG ATTTCCTTAA CTCCTGTACT CCTGGCATGA GGAAGTGGTG GCAGATTAAG 1260
TCTCAGAACT TTGATCTTGT TATATTTTAT AAGGTGGGGA AGTTTTATGA GCTGTACCAC 1320
ATGGATGCTC TTATTGGAGT CAACAAACTA GGTCTGGTAT TCATGAAAGG CAACTGGGCT 1380
CATTCTGGTT TCCCTGAAAT TGCATTTGGC CGATATTCCG ATTCTCTGGT TCAGAAAGGT 1440
TATAAAGTAG CACGAGTGGA ACAGACTGAG ACCCCTGAAA TGATGGAGGC ACGATGCCGG 1500
AAGATGGCAC ATATATCTAA GTATGACAGA GTGGTGAGGA GGGAGATCTG TAGAGTTATT 1560
ACCAAGGGTA CACAGACCTA CAGTGTTTTG GAAGGTGACC CCTCTGAGAA CTACAGTAAG 1620
TATCTCCTTA GCCTCAAAGA AAAAGAGGAG GATTCTTCTG GCCACACTCG GGTGTATGGA 1680
GTATGCTTTG TTGATACCTC ACTGGGAAAG TTTCTCATAG GTCAGTTTTC AGATGATCGC 1740
CATTGTTCCA GATTTAGGAC TCTGGTGGCA CACTATCCTC CAGTACAAGT CTTATTTGAG 1800
AAAGGAAATC TCTCAACAGA AACGAAGATG ATTCTGAAGG GTTCATTATC CTCCTCTCTT 1860
CAGGAAGGTC TGATACCAGG CTCCCAGTTT TGGGATGCAG CCAAAACTTT GAGAACTCTC 1920
CTTGAAGAAG GATATTTTAA GGAAAAGTTA AATGAGGACA GTGGGGTGAT GTTACCCCAG 1980
GTGCTTAAAG GTATGACCTC AGAGTCTGAT TCTCTTGGGT TGACACCAGG AGAGAAGAGT 2040
GAATTGGCCC TGTCTGCTCT AGGTGGTTGT GTCTTCTACC TCAAAAAATG TCTTATTGAT 2100
CAAGAGCTTT TATCAATGGC TAATTTTGAA GAATACATTC CCTTGGATTC TGACATGGTC 2160
AGTGCTGCAG GACCTGGTGC TTTTTTTGCT AAAGCCAATC AACGAATGGT GCTAGATGCT 2220
GTGACATTAA GCAACTTGGA GATTTTCATG AATGGAACAA ATGGTTCTAC TGAAGGGACC 2280
CTGCTAGAAA AGATTGATAC TTGCCATACT CCCTTTGGTA AACGGCTTCT AAAGCAGTGG 2340
CTTTGTGCCC CACTCTGTAG CCCTTATGCT ATCAATGATC GTCTAGATGC TATAGAAGAT 2400
CTAATGGTTG TGCCTGACAA AATCTCTGAT GTGGTAGACC TTCTAAAGAA GCTTCCAGAC 2460
CTTGAGAGGC TGCTGAGTAA AATTCATAAT GTTGGGTCTC CCCTCAAGAG CCAAAACCAC 2520
CCAGATAGCA GGGCTATCAT GTATGAAGAA ACTACATACA GCAAAAAAAA GATTATTGAT 2580
TTTCTTTCTG CTCTAGAAGG ATTCAAAGTA ATATGTAAAA TTATAGAGAT TATGGAAGAA 2640
GTCGTTGACA ACTTTAAGTC TAAAATCCTT AAGCAGGTTG TTACTCTACA GACAAAAACT 2700
CCTGAGGGCC GTTTTCCAGA TTTGACTCTA GAGCTGAACC GATGGGATAC AGCCTTTGAT 2760
CATGAAAAGG CTCGAAAGAC TGGACTAATT ACTCCCAAAG CAGGATTTGA CTCTGATTAT 2820
GACCAAGCTC TTGCTGACAT AAAAGAAAAT GAACAGAGCC TCCTGGAATA CTTGGAGAAA 2880
CAGCGTAGTC GAATAGGCTG TAGGACCATT GTCTACTGGG GGATCGGTAG GAACCGTTAT 2940
CAGTTGGAAA TTCCAGAGAA TTTTATCACT CGTAATTTGC CCGAAGAATA TGAGTTGAAA 3000
TCTACCAAGA AGGGCTGTAA GCGGTACTGG ACCAAAACTA TTGAGAAGAA GTTGGCTAAT 3060
CTGATAAATG CTGAAGAACG GAGAGACACA TCATTGAAGG ACTGCATGCG GCGACTGTTC 3120
TATAACTTTG ATAAAAATTA CAAGGACTGG CAGTCTGCTG TTGAGTGCAT CGCAGTATTG 3180
GATGTGTTAT TGTGCCTGGC TAACTACAGT CGAGGGGGTG ATGGCCCTAT GTGTCGTCCA 3240
GTAATTCTGT TGCCAGAAGA AGGCACTCCT CCCTTCTTAG ACCTTAGAGG ATCACGTCAT 3300
CCCTGCATTA CGAAGACTTT TTTTGGAGAT GACTTTATAC CAAATGACAT TCTGATAGGC 3360
TGTGAGGAAG AGGAAGAGGA AAATGGCAAA GCTTACTGTG TGCTTGTTAC TGGACCTAAC 3420
ATGGGGGGCA AGTCTACGCT CATGAGACAG GCTGGCCTGT TAGCTGTAAT GGCTCAGACA 3480
GGTTGTTACA TACCTGCTGA AGTGTGTAGG CTCACACCAA TTGATAGAGT ATTTACTAGA 3540
CTTGGTGCCT CAGACAGAAT AATGTCAGGT GAAAGTACAT TTTTTGTGGA GTTGAGTGAA 3600
ACTGCCAGTA TACTTACGCA TGCAACAGCA CATTCTCTGG TGCTTGTGGA TGAATTAGGA 3660
AGAGGTACTG CAACATTTGA TGGAACAGCA ATAGCAAATG CGGTTGTTAA AGAACTTGCT 3720
GAGAACATAA AGTGTCGTAC ACTGTTTTCT ACCCACTACC ATTCATTAGT AGAAGATTAT 3780
TCTCAAAATG TTGCAGTTCG CCTGGGCCAC ATGGCATGCA TGGTAGAAAA TGAATGTGAG 3840
GATCCCAGCC AGGAGACTAT TACCTTCCTC TATAAATTCA TTAAGGGAGC TTGTCCTAAA 3900
AGCTATGGCT TTAATGCAGC AAGGCTTGCC AATCTTCCAG AGGAGGTTAT TCAAAAGGGA 3960
CATAGAAAAG CAAGAGAATT TGAAAAGATG ACTCAATCAC TGCGATTATT TCGGGAAGTT 4020
TGCCTGGCTA GTGAAAGGTC GACTCTAGAT GCTGAAGCTG TCCCTAAGTT GCTGACTTTG 4080
ATTAAGGAAT TATAG 4096
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mup-0123 ENSMPUP00000010923.1 Mustela putorius furo 95 0.0 2418
WERAM-Bot-0012 ENSBTAP00000001867.5 Bos taurus 92 0.0 2346
WERAM-Ptv-0116 ENSPVAP00000010278.1 Pteropus vampyrus 92 0.0 2328
WERAM-Caf-0034 ENSCAFP00000003882.3 Canis familiaris 97 0.0 2325
WERAM-Sus-0141 ENSSSCP00000023698.1 Sus scrofa 91 0.0 2323
WERAM-Chs-0168 ENSCSAP00000009745.1 Chlorocebus sabaeus 92 0.0 2321
WERAM-Mam-0208 ENSMMUP00000030085.2 Macaca mulatta 92 0.0 2321
WERAM-Hos-0089 ENSP00000234420.4 Homo sapiens 92 0.0 2321
WERAM-Ova-0042 ENSOARP00000005406.1 Ovis aries 92 0.0 2319
WERAM-Dan-0137 ENSDNOP00000026714.1 Dasypus novemcinctus 90 0.0 2313
WERAM-Paa-0131 ENSPANP00000007626.1 Papio anubis 92 0.0 2310
WERAM-Otg-0214 ENSOGAP00000021215.1 Otolemur garnettii 91 0.0 2306
WERAM-Myl-0101 ENSMLUP00000008006.2 Myotis lucifugus 90 0.0 2305
WERAM-Tut-0091 ENSTTRP00000007640.1 Tursiops truncatus 92 0.0 2301
WERAM-Poa-0108 ENSPPYP00000013873.2 Pongo abelii 91 0.0 2294
WERAM-Ict-0166 ENSSTOP00000016600.1 Ictidomys tridecemlineatus 91 0.0 2285
WERAM-Nol-0087 ENSNLEP00000010403.1 Nomascus leucogenys 93 0.0 2276
WERAM-Pat-0096 ENSPTRP00000020434.4 Pan troglodytes 92 0.0 2272
WERAM-Loa-0023 ENSLAFP00000001328.3 Loxodonta africana 93 0.0 2264
WERAM-Orc-0143 ENSOCUP00000012569.2 Oryctolagus cuniculus 91 0.0 2255
WERAM-Prc-0145 ENSPCAP00000013528.1 Procavia capensis 88 0.0 2243
WERAM-Gog-0195 ENSGGOP00000018924.1 Gorilla gorilla 90 0.0 2235
WERAM-Cap-0004 ENSCPOP00000000836.2 Cavia porcellus 87 0.0 2222
WERAM-Fec-0079 ENSFCAP00000006578.2 Felis catus 95 0.0 2212
WERAM-Ran-0105 ENSRNOP00000021923.6 Rattus norvegicus 84 0.0 2152
WERAM-Mum-0014 ENSMUSP00000005503.3 Mus musculus 84 0.0 2149
WERAM-Sah-0081 ENSSHAP00000009277.1 Sarcophilus harrisii 80 0.0 1981
WERAM-Mod-0012 ENSMODP00000001344.2 Monodelphis domestica 80 0.0 1975
WERAM-Pes-0030 ENSPSIP00000005328.1 Pelodiscus sinensis 71 0.0 1752
WERAM-Gaga-0092 ENSGALP00000038835.2 Gallus gallus 69 0.0 1744
WERAM-Anp-0154 ENSAPLP00000015904.1 Anas platyrhynchos 73 0.0 1630
WERAM-Anc-0146 ENSACAP00000013849.3 Anolis carolinensis 65 0.0 1622
WERAM-Caj-0115 ENSCJAP00000020345.2 Callithrix jacchus 84 0.0 1605
WERAM-Meg-0053 ENSMGAP00000005001.2 Meleagris gallopavo 72 0.0 1595
WERAM-Xet-0147 ENSXETP00000049000.3 Xenopus tropicalis 70 0.0 1584
WERAM-Ocp-0051 ENSOPRP00000004458.1 Ochotona princeps 89 0.0 1580
WERAM-Tag-0082 ENSTGUP00000005725.1 Taeniopygia guttata 73 0.0 1563
WERAM-Lac-0149 ENSLACP00000017187.1 Latimeria chalumnae 70 0.0 1561
WERAM-Leo-0169 ENSLOCP00000020114.1 Lepisosteus oculatus 71 0.0 1484
WERAM-Orn-0123 ENSONIP00000012391.1 Oreochromis niloticus 69 0.0 1480
WERAM-Orla-0115 ENSORLP00000013893.1 Oryzias latipes 68 0.0 1476
WERAM-Tar-0161 ENSTRUP00000034377.1 Takifugu rubripes 67 0.0 1468
WERAM-Pof-0182 ENSPFOP00000015502.2 Poecilia formosa 68 0.0 1457
WERAM-Xim-0134 ENSXMAP00000011014.1 Xiphophorus maculatus 67 0.0 1448
WERAM-Gaa-0054 ENSGACP00000007160.1 Gasterosteus aculeatus 67 0.0 1442
WERAM-Asm-0007 ENSAMXP00000001159.1 Astyanax mexicanus 62 0.0 1435
WERAM-Ten-0197 ENSTNIP00000019708.1 Tetraodon nigroviridis 68 0.0 1431
WERAM-Gam-0173 ENSGMOP00000017118.1 Gadus morhua 69 0.0 1410
WERAM-Tub-0139 ENSTBEP00000014916.1 Tupaia belangeri 90 0.0 1367
WERAM-Dio-0122 ENSDORP00000011809.1 Dipodomys ordii 90 0.0 1249
WERAM-Pem-0088 ENSPMAP00000009336.1 Petromyzon marinus 58 0.0 1245
WERAM-Cis-0032 ENSCSAVP00000006844.1 Ciona savignyi 51 0.0 1029
WERAM-Ere-0070 ENSEEUP00000005594.1 Erinaceus europaeus 91 0.0 1013
WERAM-Eqc-0026 ENSECAP00000004388.1 Equus caballus 96 0.0 972
WERAM-Tas-0125 ENSTSYP00000013319.1 Tarsius syrichta 91 0.0 831
WERAM-Ect-0048 ENSETEP00000005096.1 Echinops telfairi 90 0.0 793
WERAM-Mim-0103 ENSMICP00000009629.1 Microcebus murinus 82 0.0 708
WERAM-Met-0160 AES82183 Medicago truncatula 41 0.0 664
WERAM-Chh-0108 ENSCHOP00000011885.1 Choloepus hoffmanni 93 2e-176 618
WERAM-Vip-0079 ENSVPAP00000007177.1 Vicugna pacos 95 7e-167 585
WERAM-Dar-0233 ENSDARP00000130154.1 Danio rerio 50 2e-22 106
WERAM-Soa-0010 ENSSARP00000001031.1 Sorex araneus 46 7e-12 71.2
WERAM-Fia-0121 ENSFALP00000010353.1 Ficedula albicollis 46 1e-11 70.5
WERAM-Mae-0114 ENSMEUP00000010800.1 Macropus eugenii 31 9e-11 67.4
WERAM-Ora-0032 ENSOANP00000005155.1 Ornithorhynchus anatinus 31 2e-10 66.2
WERAM-Sei-0090 Si024584m Setaria italica 36 4e-06 52.0
Created Date 25-Jun-2016