WERAM Information

Tag Content
WERAM ID WERAM-Brr-0193
Ensembl Protein ID Bra038607.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra038607 Bra038607.1 Bra038607.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 1.70e-162 541.3 19 331
Organism Brassica rapa
Domain Profile
  HDAC Class-I
    class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels.kelkkfnvgedcPvf 95 
                    ++v+y+y++++g+y+ygq+hpmkp+r++++h+L+++y+l+++lei +p  a+a+++ +fhs ey++fl++v+pe+  + s ++l++fnvgedcPvf
  Bra038607.1-P  19 RRVSYFYEPTIGNYYYGQGHPMKPHRIRMAHSLIVHYNLHRRLEISRPYLADAADIGRFHSPEYVDFLRSVSPESVGDSSaRNLRRFNVGEDCPVF 114
                    589***********************************************************************99866548************** PP
    class-1.txt  96 dglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfh 191
                    dglfe+c++++G+s+ aa kLn+++adiainw GGlhhakkseasGfcyvnDivl+ilellk+++rvlyidid+hhGDgveeafyttdrvmtvsfh
  Bra038607.1-P 115 DGLFEFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFH 210
                    ************************************************************************************************ PP
    class-1.txt 192 kygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlp 287
                    k+g+ ffPgtG+++dvgaekgkyya+nvPl+dg+dDes++++f+++i+kv+e+++PeavvlqcGaDsl+gDrlg+fnls+kgha+c++f++s+n+p
  Bra038607.1-P 211 KFGD-FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYRPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVP 305
                    ****.******************************************************************************************* PP
    class-1.txt 288 llvlGGGGYtlrnvaRcwtyetavvl 313
                    l+vlGGGGYt+rnvaRcw+yetav++
  Bra038607.1-P 306 LMVLGGGGYTIRNVARCWCYETAVAV 331
                    ***********************986 PP
Protein Sequence
(Fasta)		METDESGVSL ASGPDGRKRR VSYFYEPTIG NYYYGQGHPM KPHRIRMAHS LIVHYNLHRR 60
LEISRPYLAD AADIGRFHSP EYVDFLRSVS PESVGDSSAR NLRRFNVGED CPVFDGLFEF 120
CRASAGGSIG AAVKLNRQDA DIAINWGGGL HHAKKSEASG FCYVNDIVLG ILELLKMFRR 180
VLYIDIDVHH GDGVEEAFYT TDRVMTVSFH KFGDFFPGTG HIRDVGAEKG KYYALNVPLN 240
DGMDDESFRS LFRPLIQKVM EVYRPEAVVL QCGADSLSGD RLGCFNLSVK GHADCLRFLR 300
SYNVPLMVLG GGGYTIRNVA RCWCYETAVA VGGEPGNKRP YNEYFEYFGP DYTLHVEPGP 360
MENLNTPKDM ERIRNTLLEQ LSGLIHAPSV PFQHTPPVNR VLDEPEEDLE KRPKPRIWSG 420
TANYESDSDD DEKPLGGFSG INGATMDRDS TGEDEMEDDS AEPEKPFCFG LKSHYLRAAI 480
AEDALNTSVK TGFSGSLVDL FSEGRVMKEL QRSKCIGKIE EYVEEEREED VWKLRIQRER 540
WRFGYGGNIE PGEPIFDDKL AICSNTWIWE
Nucleotide Sequence
(Fasta)		ATGGAGACAG ACGAGAGCGG CGTGTCTTTA GCGTCAGGAC CCGACGGTCG TAAGCGACGA 60
GTCAGCTACT TCTACGAGCC AACGATCGGT AACTACTACT ACGGTCAAGG CCACCCCATG 120
AAACCTCACC GGATCCGTAT GGCTCATAGT CTTATCGTCC ACTACAACCT CCACCGCCGC 180
CTCGAGATCA GCCGCCCTTA CCTCGCCGAC GCCGCCGACA TCGGTCGCTT CCACTCTCCC 240
GAGTACGTCG ATTTCCTCCG CTCCGTTTCG CCGGAGTCCG TCGGCGACTC GTCCGCGCGT 300
AACCTGAGGC GATTCAACGT CGGCGAGGAT TGTCCTGTCT TCGACGGGCT TTTCGAGTTT 360
TGCCGCGCTT CCGCCGGAGG TTCGATCGGC GCCGCCGTTA AATTGAACCG GCAGGACGCG 420
GATATCGCCA TCAATTGGGG CGGTGGGCTT CACCACGCTA AGAAGAGCGA GGCGTCTGGG 480
TTTTGCTACG TAAACGACAT CGTTTTGGGG ATTCTCGAGT TGCTTAAGAT GTTTAGGCGG 540
GTTCTCTACA TTGATATCGA TGTTCACCAT GGAGATGGAG TAGAGGAAGC GTTTTACACC 600
ACTGATAGAG TTATGACCGT TTCTTTTCAC AAGTTTGGGG ACTTCTTCCC AGGAACTGGT 660
CACATCAGAG ACGTTGGCGC AGAGAAAGGG AAGTACTATG CTCTTAATGT CCCGTTGAAC 720
GATGGTATGG ATGATGAGAG TTTCCGCAGC TTGTTTAGAC CTCTTATCCA GAAGGTTATG 780
GAGGTTTATC GTCCGGAAGC TGTTGTTCTT CAGTGTGGGG CTGACTCCTT GAGCGGTGAT 840
CGGCTGGGTT GCTTCAACTT GTCAGTCAAG GGTCATGCTG ATTGCCTCCG GTTCTTGAGA 900
TCTTATAATG TTCCTCTCAT GGTCTTGGGT GGTGGAGGGT ATACTATTCG GAATGTTGCT 960
CGTTGCTGGT GTTATGAGAC TGCAGTTGCG GTTGGAGGAG AGCCGGGCAA TAAGCGCCCG 1020
TACAATGAGT ACTTTGAGTA TTTCGGTCCA GACTATACGC TTCATGTCGA GCCAGGCCCA 1080
ATGGAGAATT TGAACACACC AAAAGATATG GAGAGGATAA GGAACACATT GCTAGAACAA 1140
CTTTCTGGAC TAATACACGC ACCTAGTGTG CCGTTTCAGC ACACACCTCC AGTTAATCGA 1200
GTCTTAGATG AGCCGGAAGA AGACTTGGAG AAGAGACCAA AGCCTCGCAT TTGGAGTGGA 1260
ACTGCGAATT ATGAATCAGA CAGTGACGAT GATGAGAAAC CTCTTGGTGG TTTCTCAGGT 1320
ATTAATGGCG CAACTATGGA CAGGGACTCT ACAGGGGAAG ATGAAATGGA AGATGATAGC 1380
GCAGAGCCGG AGAAACCTTT TTGTTTTGGC CTCAAGAGCC ATTATTTGAG AGCAGCCATC 1440
GCCGAGGATG CCTTGAACAC TAGCGTTAAA ACCGGGTTCT CTGGTAGTCT TGTGGATTTG 1500
TTTAGTGAAG GGAGAGTGAT GAAAGAGCTT CAAAGATCAA AATGCATAGG GAAAATTGAA 1560
GAGTATGTTG AGGAAGAAAG GGAGGAAGAT GTGTGGAAGC TGAGGATTCA GAGAGAGAGA 1620
TGGAGATTTG GTTATGGAGG AAACATTGAA CCCGGTGAGC CGATTTTTGA TGATAAGCTA 1680
GCTATCTGTT CTAACACTTG GATATGGGAA TGA 1714
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0056 Bo3g104750.1 Brassica oleracea 99 0.0 949
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 93 0.0 898
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 92 0.0 890
WERAM-Thc-0029 EOY20838 Theobroma cacao 80 0.0 757
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 78 0.0 739
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 80 0.0 736
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 76 0.0 729
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 76 0.0 729
WERAM-Prp-0060 EMJ10303 Prunus persica 76 0.0 721
WERAM-Met-0068 AES71453 Medicago truncatula 74 0.0 710
WERAM-Amt-0082 ERN02510 Amborella trichopoda 77 0.0 676
WERAM-Sot-0084 PGSC0003DMT400069418 Solanum tuberosum 83 0.0 655
WERAM-Zem-0077 GRMZM2G136067_P01 Zea mays 73 0.0 654
WERAM-Sei-0051 Si013709m Setaria italica 73 0.0 652
WERAM-Sob-0102 Sb07g018230.1 Sorghum bicolor 69 0.0 651
WERAM-Ors-0081 OS08T0344100-01 Oryza sativa 68 0.0 650
WERAM-Orp-0087 OPUNC08G10650.1 Oryza punctata 68 0.0 650
WERAM-Orm-0085 OMERI08G09730.1 Oryza meridionalis 68 0.0 650
WERAM-Ori-0098 BGIOSGA028498-PA Oryza indica 68 0.0 650
WERAM-Orgl-0088 OGLUM08G12440.1 Oryza glumaepatula 68 0.0 650
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 68 0.0 650
WERAM-Orr-0094 ORUFI08G12880.1 Oryza rufipogon 68 0.0 649
WERAM-Tra-0274 Traes_6DS_08E9A4EDB.1 Triticum aestivum 68 0.0 649
WERAM-Brd-0077 BRADI3G22370.1 Brachypodium distachyon 72 0.0 648
WERAM-Hov-0020 MLOC_17056.1 Hordeum vulgare 68 0.0 647
WERAM-Orbr-0098 OB08G20020.1 Oryza brachyantha 68 0.0 642
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 70 0.0 640
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 64 3e-172 602
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 64 8e-166 581
WERAM-Mua-0044 GSMUA_Achr2P06520_001 Musa acuminata 74 8e-164 574
WERAM-Aet-0051 EMT16627 Aegilops tauschii 70 2e-162 569
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 62 3e-162 569
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 66 5e-162 568
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 66 8e-162 567
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 66 9e-162 567
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 66 1e-161 567
WERAM-Orni-0020 ONIVA02G09910.1 Oryza nivara 64 1e-161 566
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 66 2e-161 566
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 66 2e-161 566
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 66 2e-161 566
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 66 2e-161 566
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 66 3e-161 565
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 65 3e-161 565
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 66 3e-161 565
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 65 3e-161 565
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 66 4e-161 565
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 65 4e-161 565
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 65 4e-161 565
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 65 5e-161 565
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 65 5e-161 565
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 65 6e-161 565
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 66 4e-160 561
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 65 1e-159 560
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 65 2e-159 560
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 65 2e-159 560
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 58 4e-159 558
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 64 4e-158 555
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 65 5e-158 555
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 60 6e-158 555
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 67 7e-158 555
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 60 1e-157 553
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 66 1e-157 553
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 60 2e-157 553
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 60 2e-157 553
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 60 2e-157 553
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 59 2e-157 553
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 66 2e-157 553
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 66 4e-157 552
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 65 5e-157 551
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 65 2e-156 550
WERAM-Xet-0050 ENSXETP00000015978.3 Xenopus tropicalis 59 3e-156 549
WERAM-Xim-0002 ENSXMAP00000000390.1 Xiphophorus maculatus 64 8e-156 548
WERAM-Tar-0085 ENSTRUP00000016627.1 Takifugu rubripes 65 8e-156 547
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 63 1e-155 547
WERAM-Pof-0067 ENSPFOP00000005770.2 Poecilia formosa 64 2e-155 546
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 66 2e-155 546
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 62 4e-155 545
WERAM-Orn-0087 ENSONIP00000009730.1 Oreochromis niloticus 64 5e-155 545
WERAM-Orla-0197 ENSORLP00000022529.1 Oryzias latipes 64 5e-155 545
WERAM-Gaa-0093 ENSGACP00000012045.1 Gasterosteus aculeatus 64 6e-155 545
WERAM-Gam-0033 ENSGMOP00000003469.1 Gadus morhua 64 2e-154 543
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 61 6e-154 541
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 61 6e-154 541
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 60 7e-154 541
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 64 7e-154 541
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 59 9e-154 541
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 57 4e-153 539
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 60 3e-150 529
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 60 3e-150 529
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 61 4e-150 528
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 61 4e-150 528
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 62 1e-149 527
WERAM-Ved-0020 EGY15146 Verticillium dahliae 59 4e-149 525
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 61 9e-149 524
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 61 3e-148 522
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 70 1e-147 520
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 64 1e-146 517
WERAM-Coi-0024 EAS33504 Coccidioides immitis 60 1e-146 517
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 60 1e-146 517
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 60 6e-146 514
WERAM-Trv-0003 EHK19072 Trichoderma virens 60 9e-145 511
WERAM-Kop-0004 CAY67954 Komagataella pastoris 58 1e-144 511
WERAM-Trr-0017 EGR48353 Trichoderma reesei 56 1e-144 510
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 58 3e-144 509
WERAM-Caa-0018 KGT69072 Candida albicans 54 3e-144 509
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 57 6e-144 508
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 58 6e-144 508
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 60 7e-144 508
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 54 5e-143 505
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 57 2e-142 503
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 57 2e-142 503
WERAM-Cag-0003 CAG57932 Candida glabrata 60 3e-142 503
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 57 6e-142 501
WERAM-Cym-0014 CMJ129CT Cyanidioschyzon merolae 59 1e-141 501
WERAM-Ast-0010 CADATEAP00004306 Aspergillus terreus 59 4e-141 499
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 60 4e-141 498
WERAM-Nec-0007 EFNCRP00000000997 Neurospora crassa 59 7e-141 498
WERAM-Scp-0033 SPBC36.05c.1:pep Schizosaccharomyces pombe 60 7e-141 498
Created Date 25-Jun-2016