| Tag |
Content |
| WERAM ID |
WERAM-Bro-0056 |
| Ensembl Protein ID |
Bo3g104750.1 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.50e-162 |
542 |
19 |
331 |
|
| Organism |
Brassica oleracea |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeels.kelkkfnvgedcPvfd 96
++v+y+y++++g+y+ygq+hpmkp+r++++h+L+++y+l+++lei +p a+a+++ +fhs ey++fl++v+pe+ + s ++l++fnvgedcPvfd
Bo3g104750.1 19 RRVSYFYEPTIGNYYYGQGHPMKPHRIRMAHSLIVHYNLHRRLEISRPYLADAADIGRFHSPEYVDFLRSVSPESVGDSSaRNLRRFNVGEDCPVFD 115
589***********************************************************************99866548*************** PP
class-1.txt 97 glfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhky 193
glfe+c++++G+s+ aa kLn+++adiainw GGlhhakkseasGfcyvnDivl+ilellk+++rvlyidid+hhGDgveeafyttdrvmtvsfhk+
Bo3g104750.1 116 GLFEFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKF 212
************************************************************************************************* PP
class-1.txt 194 geeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfnlpllv 290
g+ ffPgtG+++dvgaekgkyya+nvPl+dg+dDes++++f+++i+kv+e+++PeavvlqcGaDsl+gDrlg+fnls+kgha+c++f++s+n+pl+v
Bo3g104750.1 213 GD-FFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYRPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMV 308
**.********************************************************************************************** PP
class-1.txt 291 lGGGGYtlrnvaRcwtyetavvl 313
lGGGGYt+rnvaRcw+yetav++
Bo3g104750.1 309 LGGGGYTIRNVARCWCYETAVAV 331
********************986 PP
|
Protein Sequence
(Fasta) | METDESGVSL ASGPDGRKRR VSYFYEPTIG NYYYGQGHPM KPHRIRMAHS LIVHYNLHRR 60
LEISRPYLAD AADIGRFHSP EYVDFLRSVS PESVGDSSAR NLRRFNVGED CPVFDGLFEF 120
CRASAGGSIG AAVKLNRQDA DIAINWGGGL HHAKKSEASG FCYVNDIVLG ILELLKMFRR 180
VLYIDIDVHH GDGVEEAFYT TDRVMTVSFH KFGDFFPGTG HIRDVGAEKG KYYALNVPLN 240
DGMDDESFRS LFRPLIQKVM EVYRPEAVVL QCGADSLSGD RLGCFNLSVK GHADCLRFLR 300
SYNVPLMVLG GGGYTIRNVA RCWCYETAVA VGVEPDNKLP YNEYFEYFGP DYTLHVEPGP 360
MENLNTPKDM ERIRNTLLEQ LSGLIHAPSV PFQHTPPVNR VLDEPEEDLE KRPKPRIWSG 420
TANYESDSDD DEKPLGGFSG INGPTMDRDS TGEDEMEDDS AEPEVDPPSS Protein Fasta Sequence
>Bo3g104750.1|Class-I|Brassica oleracea
METDESGVSLASGPDGRKRRVSYFYEPTIGNYYYGQGHPMKPHRIRMAHSLIVHYNLHRRLEISRPYLADAADIGRFHSPEYVDFLRSVSPESVGDSSARNLRRFNVGEDCPVFDGLFEFCRASAGGSIGAAVKLNRQDADIAINWGGGLHHAKKSEASGFCYVNDIVLGILELLKMFRRVLYIDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHIRDVGAEKGKYYALNVPLNDGMDDESFRSLFRPLIQKVMEVYRPEAVVLQCGADSLSGDRLGCFNLSVKGHADCLRFLRSYNVPLMVLGGGGYTIRNVARCWCYETAVAVGVEPDNKLPYNEYFEYFGPDYTLHVEPGPMENLNTPKDMERIRNTLLEQLSGLIHAPSVPFQHTPPVNRVLDEPEEDLEKRPKPRIWSGTANYESDSDDDEKPLGGFSGINGPTMDRDSTGEDEMEDDSAEPEVDPPSS |
Nucleotide Sequence
(Fasta) | ATGGAGACAG ACGAGAGCGG CGTCTCTTTA GCGTCAGGGC CCGACGGTCG TAAGCGACGA 60
GTCAGCTACT TCTACGAGCC AACGATCGGT AACTACTACT ACGGTCAAGG CCACCCCATG 120
AAGCCTCACC GGATCCGTAT GGCTCATAGT CTAATCGTCC ACTACAACCT CCACCGCCGC 180
CTCGAGATCA GCCGCCCTTA CCTCGCCGAC GCTGCCGACA TCGGTCGCTT CCACTCTCCC 240
GAGTACGTCG ATTTCCTCCG CTCCGTTTCG CCGGAGTCCG TCGGCGATTC GTCCGCGCGT 300
AACCTAAGGC GATTCAATGT CGGCGAGGAT TGTCCCGTCT TCGACGGTCT TTTCGAGTTT 360
TGCCGCGCTT CCGCCGGAGG TTCGATCGGC GCCGCCGTTA AATTGAACCG GCAGGACGCG 420
GATATCGCCA TCAATTGGGG CGGTGGGCTT CACCACGCTA AGAAGAGCGA GGCGTCTGGG 480
TTTTGCTACG TAAACGACAT CGTTTTGGGG ATTCTCGAGT TGCTTAAGAT GTTTAGGCGG 540
GTTCTCTACA TTGATATCGA TGTTCACCAT GGAGATGGAG TAGAGGAAGC GTTTTACACC 600
ACTGATAGAG TTATGACCGT TTCTTTTCAC AAGTTTGGGG ACTTCTTCCC TGGAACTGGT 660
CACATCAGAG ACGTTGGCGC TGAGAAAGGG AAGTACTATG CTCTCAATGT CCCGTTGAAC 720
GATGGTATGG ACGATGAGAG TTTCCGCAGC TTGTTTAGAC CTCTTATCCA GAAGGTTATG 780
GAGGTTTATC GGCCAGAAGC AGTTGTTCTT CAGTGCGGGG CTGACTCCTT GAGCGGTGAT 840
CGGCTGGGTT GCTTCAACTT GTCAGTCAAG GGCCATGCTG ATTGCCTCCG GTTCTTGAGA 900
TCTTATAATG TTCCTCTCAT GGTCTTGGGT GGTGGAGGGT ATACTATTCG GAATGTTGCT 960
CGTTGCTGGT GTTATGAGAC TGCAGTTGCG GTTGGAGTAG AGCCGGACAA CAAGCTACCG 1020
TACAATGAGT ACTTTGAGTA TTTCGGTCCA GACTATACGC TTCATGTCGA GCCAGGCCCA 1080
ATGGAGAATT TGAACACACC AAAAGATATG GAGAGGATAA GGAACACATT GCTAGAACAA 1140
CTTTCTGGAC TAATACACGC ACCTAGTGTG CCGTTTCAGC ACACACCTCC AGTTAATCGA 1200
GTCTTAGATG AGCCGGAAGA AGACTTGGAG AAGAGACCAA AGCCTCGAAT TTGGAGTGGA 1260
ACTGCGAATT ATGAATCAGA CAGTGACGAT GATGAGAAAC CTCTTGGTGG TTTCTCAGGT 1320
ATTAATGGCC CAACTATGGA CAGGGACTCT ACAGGGGAAG ATGAAATGGA AGATGATAGC 1380
GCAGAGCCGG AGGTGGATCC ACCATCGTCT TGA
1414Nucleotide Fasta Sequence
>Bo3g104750.1|Class-I|Brassica oleracea
ATGGAGACAGACGAGAGCGGCGTCTCTTTAGCGTCAGGGCCCGACGGTCGTAAGCGACGAGTCAGCTACTTCTACGAGCCAACGATCGGTAACTACTACTACGGTCAAGGCCACCCCATGAAGCCTCACCGGATCCGTATGGCTCATAGTCTAATCGTCCACTACAACCTCCACCGCCGCCTCGAGATCAGCCGCCCTTACCTCGCCGACGCTGCCGACATCGGTCGCTTCCACTCTCCCGAGTACGTCGATTTCCTCCGCTCCGTTTCGCCGGAGTCCGTCGGCGATTCGTCCGCGCGTAACCTAAGGCGATTCAATGTCGGCGAGGATTGTCCCGTCTTCGACGGTCTTTTCGAGTTTTGCCGCGCTTCCGCCGGAGGTTCGATCGGCGCCGCCGTTAAATTGAACCGGCAGGACGCGGATATCGCCATCAATTGGGGCGGTGGGCTTCACCACGCTAAGAAGAGCGAGGCGTCTGGGTTTTGCTACGTAAACGACATCGTTTTGGGGATTCTCGAGTTGCTTAAGATGTTTAGGCGGGTTCTCTACATTGATATCGATGTTCACCATGGAGATGGAGTAGAGGAAGCGTTTTACACCACTGATAGAGTTATGACCGTTTCTTTTCACAAGTTTGGGGACTTCTTCCCTGGAACTGGTCACATCAGAGACGTTGGCGCTGAGAAAGGGAAGTACTATGCTCTCAATGTCCCGTTGAACGATGGTATGGACGATGAGAGTTTCCGCAGCTTGTTTAGACCTCTTATCCAGAAGGTTATGGAGGTTTATCGGCCAGAAGCAGTTGTTCTTCAGTGCGGGGCTGACTCCTTGAGCGGTGATCGGCTGGGTTGCTTCAACTTGTCAGTCAAGGGCCATGCTGATTGCCTCCGGTTCTTGAGATCTTATAATGTTCCTCTCATGGTCTTGGGTGGTGGAGGGTATACTATTCGGAATGTTGCTCGTTGCTGGTGTTATGAGACTGCAGTTGCGGTTGGAGTAGAGCCGGACAACAAGCTACCGTACAATGAGTACTTTGAGTATTTCGGTCCAGACTATACGCTTCATGTCGAGCCAGGCCCAATGGAGAATTTGAACACACCAAAAGATATGGAGAGGATAAGGAACACATTGCTAGAACAACTTTCTGGACTAATACACGCACCTAGTGTGCCGTTTCAGCACACACCTCCAGTTAATCGAGTCTTAGATGAGCCGGAAGAAGACTTGGAGAAGAGACCAAAGCCTCGAATTTGGAGTGGAACTGCGAATTATGAATCAGACAGTGACGATGATGAGAAACCTCTTGGTGGTTTCTCAGGTATTAATGGCCCAACTATGGACAGGGACTCTACAGGGGAAGATGAAATGGAAGATGATAGCGCAGAGCCGGAGGTGGATCCACCATCGTCTTGA
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
