WERAM Information

Tag Content
WERAM ID WERAM-Sob-0089
Ensembl Protein ID Sb06g017810.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb06g017810 Sb06g017810.1 Sb06g017810.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.50e-12 46.5 197 246
Organism Sorghum bicolor
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    +C +Cg ++ +e++++ Cd C++w+H++Cv ++  ++ + k++ Cp C +
  Sb06g017810.1 197 LCGTCGGRYSNEEFWIGCDICEKWYHGDCVRITPARADYIKQYKCPACSN 246
                    7********************************777776689******86 PP
Protein Sequence
(Fasta)		MDGSGSAAIF PNTRTPEDVF TDFRARRAGI LKALTTDVEK FYKLCDPEKE NLCLYGLSNE 60
TWEVTVPAEE VPPELPEPAL GINFARDGMP EKDWLSLVAV HSDAWLIAVA FYFGARFGFD 120
KDARRRLYMM INNHPTVFEV VTGIGKKQPK APSSNGKTKS SSKKKPNSNS KPAKQPLPKQ 180
EQQIIKEDGG DKDQAYLCGT CGGRYSNEEF WIGCDICEKW YHGDCVRITP ARADYIKQYK 240
CPACSNKRSR E 251
Nucleotide Sequence
(Fasta)		GAACTTCTAT CCTCCCGCAA CTCCGCAGTC CGCACCCGCC AGGCCGCCAC CACCACCACC 60
TCCGACGCCG CCTCCTCGTC CTCTTCCGCC TGAACCCTAG CCTCGCATCG ACCGCCGCCA 120
CCGCTCCTCC CCGGAAGCTG CAGTGCGGCT TAGCGGCCGC GATGGACGGG TCCGGTTCGG 180
CCGCCATCTT CCCGAACACG CGCACCCCCG AGGATGTCTT CACGGATTTC CGCGCCCGCC 240
GTGCCGGCAT TCTCAAGGCA CTCACCACCG ATGTGGAGAA GTTCTACAAG TTGTGCGACC 300
CAGAGAAGGA GAACTTGTGC CTCTATGGAC TATCTAATGA AACCTGGGAA GTGACCGTTC 360
CTGCTGAGGA AGTTCCTCCA GAACTACCAG AGCCCGCACT GGGAATAAAC TTTGCTCGTG 420
ATGGAATGCC AGAGAAAGAT TGGCTCTCGC TGGTAGCTGT GCACAGTGAT GCATGGTTGA 480
TTGCTGTGGC ATTTTACTTT GGGGCTCGCT TCGGATTTGA TAAAGATGCC AGGAGACGGC 540
TCTACATGAT GATAAATAAT CATCCCACTG TATTTGAAGT TGTGACAGGA ATTGGGAAGA 600
AGCAACCAAA AGCCCCCAGC TCAAATGGCA AAACCAAGTC GAGTTCTAAG AAGAAACCCA 660
ATTCTAACAG CAAGCCAGCA AAGCAGCCTC TGCCAAAGCA GGAGCAACAG ATCATCAAAG 720
AAGATGGAGG CGACAAGGAT CAAGCTTACC TGTGCGGTAC ATGTGGAGGG AGGTATTCTA 780
ATGAAGAATT CTGGATTGGC TGTGACATTT GCGAGAAGTG GTACCATGGT GACTGTGTCC 840
GCATCACACC TGCGAGGGCA GACTACATCA AGCAGTACAA ATGCCCCGCT TGCAGCAACA 900
AGAGAAGCAG AGAGTGAGCA TGGGTCGCCG ACGCCCCTGG CTGATGTAGT TAGGATAGTA 960
AGCAATTCGA CTGGGGAGGG TTGGCGTTTC CTGCTGTTTC GGCAGCACCT GGGCACACCA 1020
GTGCCACCAG TCGTTTCCAT CTCACTAGTC GTAGTCGTTG TTACTCCTGG GTGTACTTTT 1080
TAGTAGGCTC TTAGCCGCAG CTGCTCTTGT AGTGCACTAG TGTTAATGGA CGCCATTCTT 1140
AAACGTCAAA ACTCTCCCCG AGTAATGTAG TCGTTTCTGG TAAATGGTAA TGAACTGATG 1200
ACCCATTTCT TGCGTGCCGT TATCATTCCT ATGGTCAAAT CATAGAGATG CC 1253
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sei-0038 Si010902m Setaria italica 83 1e-98 356
WERAM-Zem-0087 GRMZM2G156088_P01 Zea mays 75 6e-88 320
WERAM-Brd-0086 BRADI3G46110.1 Brachypodium distachyon 72 1e-84 309
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 72 2e-82 302
WERAM-Orr-0023 ORUFI02G21900.1 Oryza rufipogon 73 2e-81 299
WERAM-Orni-0023 ONIVA02G22970.1 Oryza nivara 73 2e-81 299
WERAM-Ori-0026 BGIOSGA008446-PA Oryza indica 73 2e-81 299
WERAM-Orgl-0025 OGLUM02G21140.1 Oryza glumaepatula 73 2e-81 299
WERAM-Org-0024 ORGLA02G0179500.1 Oryza glaberrima 73 2e-81 299
WERAM-Orb-0024 OBART02G20890.1 Oryza barthii 73 2e-81 299
WERAM-Ors-0022 OS02T0564100-01 Oryza sativa 73 3e-81 298
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 69 7e-81 297
WERAM-Orbr-0027 OB02G28450.1 Oryza brachyantha 69 5e-80 294
WERAM-Orp-0023 OPUNC02G18840.1 Oryza punctata 64 4e-79 291
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 66 8e-78 287
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 64 3e-74 275
WERAM-Amt-0088 ERM99796 Amborella trichopoda 62 4e-72 268
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 60 1e-71 266
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 62 3e-71 265
WERAM-Thc-0077 EOY27191 Theobroma cacao 62 3e-71 265
WERAM-Glm-0075 GLYMA07G04040.1 Glycine max 65 4e-71 265
WERAM-Prp-0081 EMJ24886 Prunus persica 62 4e-71 265
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 60 1e-69 260
WERAM-Arl-0130 scaffold_500181.1 Arabidopsis lyrata 60 4e-69 258
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 62 5e-69 258
WERAM-Aet-0106 EMT19247 Aegilops tauschii 65 5e-69 258
WERAM-Art-0079 AT3G42790.1 Arabidopsis thaliana 63 5e-68 254
WERAM-Met-0117 KEH32736 Medicago truncatula 59 9e-68 253
WERAM-Brr-0124 Bra024817.1-P Brassica rapa 63 1e-67 253
WERAM-Php-0090 PP1S371_53V6.1 Physcomitrella patens 61 1e-66 249
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 64 1e-66 249
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 62 3e-66 248
WERAM-Orl-0043 KN538915.1_FGP008 Oryza longistaminata 65 8e-64 240
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 61 2e-63 239
Created Date 25-Jun-2016