Tag |
Content |
WERAM ID |
WERAM-Sob-0125 |
Ensembl Protein ID |
Sb09g021720.1 |
Gene Name |
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Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HDAC |
Class-I |
3.50e-37 |
129.5 |
52 |
339 |
|
Organism |
Sorghum bicolor |
Domain Profile |
HDAC Class-I
class-1.txt 18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqlitGasleaa 113 ++hp r++ + +++ + + l+ + + a+a+el +fhs eyie l + +++ a++l + + + g + l +G++l+a+ Sb09g021720.1 52 DQHPENADRVRNMVSILRRGPIAHFLSWHSGRPAHASELRSFHSSEYIEELVQANATGAKKLCE---------GTFLNPGSWGAVLLAAGTTLSAV 138 689999999999999999999999999999*********************9999988888773.........334455667777799******** PP class-1.txt 114 kkLnkkeadiainw.aGGlhhakkseasGfcyvnDivlail.ellkkhkrvlyididlhhGDgveeafyttdrvmtvsfhkygeef...fPgtGdl 204 k++ +++ ++a hha+ +a G+c++n+ la++ l +v +did+h+G+g e fy td v+t+s+h + ++ P +G++ Sb09g021720.1 139 KHILDGHGNLAYALvRPPGHHAQPGHADGYCFLNNAGLAVQlALDSGRAKVAVVDIDVHYGNGTAEGFYRTDNVLTMSLHMRHGSWgpsHPQSGSV 234 *******999987624567********************9715556899*******************************8666662336789*** PP class-1.txt 205 sdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksf.....nlpllvlGGGG 295 +++g++kg y +n+Pl +g D ye +++++ + i+ f+P+ +vl +G Ds a D+ g l+++g+ ++ ++++s n ++lv+ GG Sb09g021720.1 235 DEIGEGKGLGYNLNIPLPNGSGDAGYEYAMNELVVPAIDKFQPQLLVLVIGQDSSAFDPNGRQCLTMEGYRKIGQIMRSLanrhsNGQILVVQEGG 330 *****************************************************************************997643345679******* PP class-1.txt 296 YtlrnvaRc 304 Y ++ a c Sb09g021720.1 331 YHITYSAYC 339 **9988877 PP
|
Protein Sequence (Fasta) | MASESSPPPA EAPPPVPGNK LAVFWHEGML AHDAGRGVFD SGRDPGFLDV LDQHPENADR 60 VRNMVSILRR GPIAHFLSWH SGRPAHASEL RSFHSSEYIE ELVQANATGA KKLCEGTFLN 120 PGSWGAVLLA AGTTLSAVKH ILDGHGNLAY ALVRPPGHHA QPGHADGYCF LNNAGLAVQL 180 ALDSGRAKVA VVDIDVHYGN GTAEGFYRTD NVLTMSLHMR HGSWGPSHPQ SGSVDEIGEG 240 KGLGYNLNIP LPNGSGDAGY EYAMNELVVP AIDKFQPQLL VLVIGQDSSA FDPNGRQCLT 300 MEGYRKIGQI MRSLANRHSN GQILVVQEGG YHITYSAYCL HATLEGVLDL EAPLLDDPIA 360 YYPEDEEYTM KVVDMVRSCW KESVPFLKDI Protein Fasta Sequence
>Sb09g021720.1|Class-I|Sorghum bicolor MASESSPPPAEAPPPVPGNKLAVFWHEGMLAHDAGRGVFDSGRDPGFLDVLDQHPENADRVRNMVSILRRGPIAHFLSWHSGRPAHASELRSFHSSEYIEELVQANATGAKKLCEGTFLNPGSWGAVLLAAGTTLSAVKHILDGHGNLAYALVRPPGHHAQPGHADGYCFLNNAGLAVQLALDSGRAKVAVVDIDVHYGNGTAEGFYRTDNVLTMSLHMRHGSWGPSHPQSGSVDEIGEGKGLGYNLNIPLPNGSGDAGYEYAMNELVVPAIDKFQPQLLVLVIGQDSSAFDPNGRQCLTMEGYRKIGQIMRSLANRHSNGQILVVQEGGYHITYSAYCLHATLEGVLDLEAPLLDDPIAYYPEDEEYTMKVVDMVRSCWKESVPFLKDI
|
Nucleotide Sequence (Fasta) | AGCGCCGTCA CTGGAAGCGA AATCCCCCGC GCCGAGCCGC CGATGGCGTC CGAATCCTCA 60 CCGCCGCCGG CGGAGGCGCC ACCGCCGGTT CCGGGAAACA AGCTGGCGGT ATTCTGGCAC 120 GAGGGCATGC TGGCCCACGA CGCCGGCCGC GGCGTGTTCG ACTCGGGCCG CGATCCGGGA 180 TTCCTGGATG TGCTCGACCA GCACCCGGAG AACGCCGACC GCGTCCGCAA CATGGTCTCC 240 ATCCTCCGCC GCGGGCCCAT CGCGCACTTC CTCTCCTGGC ACTCGGGCCG CCCCGCCCAC 300 GCCTCCGAGC TTCGCTCCTT CCACTCCTCA GAATACATAG AGGAGCTTGT GCAGGCGAAC 360 GCCACCGGAG CCAAGAAGCT CTGCGAGGGC ACATTCTTGA ACCCGGGCTC CTGGGGCGCG 420 GTGCTTCTAG CGGCCGGAAC CACGCTCTCT GCTGTGAAGC ACATACTAGA TGGGCACGGG 480 AACCTGGCCT ACGCGTTGGT TCGGCCCCCT GGCCACCACG CGCAGCCCGG CCATGCAGAT 540 GGTTACTGCT TTCTGAACAA TGCCGGACTT GCTGTGCAGC TGGCTCTGGA TTCCGGGCGT 600 GCAAAGGTTG CTGTTGTGGA TATTGATGTA CACTACGGGA ATGGTACTGC AGAGGGCTTC 660 TATCGCACAG ACAATGTGTT GACAATGTCT CTTCACATGA GGCATGGTTC TTGGGGGCCA 720 TCGCATCCGC AAAGTGGCTC CGTCGATGAG ATTGGTGAAG GCAAGGGGCT TGGGTACAAT 780 CTCAATATAC CTTTGCCTAA TGGAAGTGGA GATGCTGGGT ATGAATATGC GATGAACGAG 840 TTGGTTGTTC CAGCGATTGA TAAGTTTCAG CCTCAGCTTT TAGTTTTGGT GATTGGCCAA 900 GATTCTAGTG CGTTTGATCC CAATGGAAGA CAGTGCTTGA CCATGGAAGG CTACAGGAAA 960 ATTGGACAAA TAATGAGGAG CCTGGCTAAT CGACATAGCA ACGGGCAAAT ATTGGTTGTC 1020 CAGGAAGGGG GTTACCACAT CACTTATTCA GCATACTGTC TGCATGCTAC ACTGGAAGGA 1080 GTTTTGGATC TGGAAGCCCC GCTCCTTGAT GACCCGATCG CTTACTACCC CGAGGATGAG 1140 GAGTACACTA TGAAAGTTGT CGACATGGTA AGGAGTTGCT GGAAGGAATC GGTTCCTTTC 1200 CTGAAGGACA TTTAGAGGAA ATCATGTTTT AGACGCCCCG ATTGAATTAG GAAGATCACA 1260 CGTTGGAGTA CGTTTTTAGG CCTTGTATTT AAGATTCCCT GGTCACAAAC AATATTGCAC 1320 AGGATAGGTT AAGAACATTG TTTGCTGCTG CTGTTGAGTT TCTGAAAATC AGGATCTCGT 1380 CAGCCTATTT TGGATAAACA GCTGATCTTT TCC
1414Nucleotide Fasta Sequence
>Sb09g021720.1|Class-I|Sorghum bicolor AGCGCCGTCACTGGAAGCGAAATCCCCCGCGCCGAGCCGCCGATGGCGTCCGAATCCTCACCGCCGCCGGCGGAGGCGCCACCGCCGGTTCCGGGAAACAAGCTGGCGGTATTCTGGCACGAGGGCATGCTGGCCCACGACGCCGGCCGCGGCGTGTTCGACTCGGGCCGCGATCCGGGATTCCTGGATGTGCTCGACCAGCACCCGGAGAACGCCGACCGCGTCCGCAACATGGTCTCCATCCTCCGCCGCGGGCCCATCGCGCACTTCCTCTCCTGGCACTCGGGCCGCCCCGCCCACGCCTCCGAGCTTCGCTCCTTCCACTCCTCAGAATACATAGAGGAGCTTGTGCAGGCGAACGCCACCGGAGCCAAGAAGCTCTGCGAGGGCACATTCTTGAACCCGGGCTCCTGGGGCGCGGTGCTTCTAGCGGCCGGAACCACGCTCTCTGCTGTGAAGCACATACTAGATGGGCACGGGAACCTGGCCTACGCGTTGGTTCGGCCCCCTGGCCACCACGCGCAGCCCGGCCATGCAGATGGTTACTGCTTTCTGAACAATGCCGGACTTGCTGTGCAGCTGGCTCTGGATTCCGGGCGTGCAAAGGTTGCTGTTGTGGATATTGATGTACACTACGGGAATGGTACTGCAGAGGGCTTCTATCGCACAGACAATGTGTTGACAATGTCTCTTCACATGAGGCATGGTTCTTGGGGGCCATCGCATCCGCAAAGTGGCTCCGTCGATGAGATTGGTGAAGGCAAGGGGCTTGGGTACAATCTCAATATACCTTTGCCTAATGGAAGTGGAGATGCTGGGTATGAATATGCGATGAACGAGTTGGTTGTTCCAGCGATTGATAAGTTTCAGCCTCAGCTTTTAGTTTTGGTGATTGGCCAAGATTCTAGTGCGTTTGATCCCAATGGAAGACAGTGCTTGACCATGGAAGGCTACAGGAAAATTGGACAAATAATGAGGAGCCTGGCTAATCGACATAGCAACGGGCAAATATTGGTTGTCCAGGAAGGGGGTTACCACATCACTTATTCAGCATACTGTCTGCATGCTACACTGGAAGGAGTTTTGGATCTGGAAGCCCCGCTCCTTGATGACCCGATCGCTTACTACCCCGAGGATGAGGAGTACACTATGAAAGTTGTCGACATGGTAAGGAGTTGCTGGAAGGAATCGGTTCCTTTCCTGAAGGACATTTAGAGGAAATCATGTTTTAGACGCCCCGATTGAATTAGGAAGATCACACGTTGGAGTACGTTTTTAGGCCTTGTATTTAAGATTCCCTGGTCACAAACAATATTGCACAGGATAGGTTAAGAACATTGTTTGCTGCTGCTGTTGAGTTTCTGAAAATCAGGATCTCGTCAGCCTATTTTGGATAAACAGCTGATCTTTTCC
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Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |