WERAM Information

Tag Content
WERAM ID WERAM-Sot-0084
Ensembl Protein ID PGSC0003DMT400069418
Gene Name PGSC0003DMG400026989
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PGSC0003DMG400026989 PGSC0003DMT400069418 PGSC0003DMT400069418
PGSC0003DMG400026989 PGSC0003DMT400069419 PGSC0003DMT400069419
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 8.80e-161 536.1 22 335
Organism Solanum tuberosum
Domain Profile
  HDAC Class-I
           class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae..elskelkkfn 87 
                           ++v+y+y++++g+y+ygq+hpmkp+r++++h+L+++y l++++ei +p  a a+++ +fhs +y++fl +v+pe+ +  ++s++lk+fn
  PGSC0003DMT400069418  22 RRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYYLHRRMEISRPFPAGADDIRRFHSPDYVDFLASVSPETLHdhTHSRHLKRFN 110
                           589************************************************************************983345589***** PP
           class-1.txt  88 vgedcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgve 176
                           vgedcPvfdglf +cq+++G+s+ aa kLn+++adi+inwaGGlhhakkseasGfcyvnDivl+ilellk hkrvlyidid+hhGDgve
  PGSC0003DMT400069418 111 VGEDCPVFDGLFGFCQASAGGSIGAAVKLNRQDADITINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHKRVLYIDIDIHHGDGVE 199
                           ***************************************************************************************** PP
           class-1.txt 177 eafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlg 265
                           eaf ttdrvmtvsfhk+g+ ffPgtG+++d+ga++gkyya+nvPl+dg+dD+s+ ++f++ i+kv+e+++P+avvlqcGaDslagDrlg
  PGSC0003DMT400069418 200 EAFFTTDRVMTVSFHKFGD-FFPGTGHIKDIGANQGKYYALNVPLHDGMDDDSFGRLFRPTIQKVMEVYQPDAVVLQCGADSLAGDRLG 287
                           *******************.********************************************************************* PP
           class-1.txt 266 efnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
                           +fnls+kgha c+++++sfn+pl+vlGGGGYt+rnvaRcw+yetav++
  PGSC0003DMT400069418 288 CFNLSVKGHAACLRYLRSFNVPLMVLGGGGYTIRNVARCWCYETAVAV 335
                           *********************************************986 PP
Protein Sequence
(Fasta)		MDSSTVDGGA SLPSTGTDAR KRRVSYFYEP TIGDYYYGQG HPMKPHRIRM AHNLIVHYYL 60
HRRMEISRPF PAGADDIRRF HSPDYVDFLA SVSPETLHDH THSRHLKRFN VGEDCPVFDG 120
LFGFCQASAG GSIGAAVKLN RQDADITINW AGGLHHAKKS EASGFCYVND IVLGILELLK 180
VHKRVLYIDI DIHHGDGVEE AFFTTDRVMT VSFHKFGDFF PGTGHIKDIG ANQGKYYALN 240
VPLHDGMDDD SFGRLFRPTI QKVMEVYQPD AVVLQCGADS LAGDRLGCFN LSVKGHAACL 300
RYLRSFNVPL MVLGGGGYTI RNVARCWCYE TAVAVGVEPE NKLPYNEYYE YFGPDYTLHV 360
EPNPMENLNS PRDLEKMR 378
Nucleotide Sequence
(Fasta)		CTGGACTCAA TACAGACTGC CGAGTCTCAC GCAAAAATCC CAAATTTCAT CATCACTATC 60
ACTCCGAACC CAAAAATCAG TGGCCAATGG ACTCCTCCAC CGTAGACGGC GGCGCATCGC 120
TTCCATCCAC CGGTACCGAC GCTAGGAAGC GTCGTGTCTC TTACTTTTAT GAGCCAACCA 180
TCGGCGATTA TTACTACGGC CAAGGTCATC CGATGAAGCC GCACCGTATC AGAATGGCCC 240
ACAATCTCAT CGTACACTAC TACCTACACA GGCGTATGGA AATCAGTCGT CCTTTTCCGG 300
CGGGAGCGGA TGATATCCGC CGTTTTCACT CGCCGGATTA TGTTGACTTC CTTGCTTCCG 360
TTTCACCGGA GACTCTTCAT GACCATACCC ATTCGCGTCA TCTCAAAAGA TTTAATGTTG 420
GTGAGGATTG CCCTGTTTTC GATGGGCTTT TTGGGTTTTG TCAAGCTTCT GCTGGTGGAT 480
CTATTGGGGC TGCGGTTAAG CTTAATCGGC AGGATGCTGA TATAACGATC AACTGGGCTG 540
GTGGTCTGCA CCATGCAAAG AAAAGTGAAG CTTCTGGTTT TTGCTATGTG AATGATATTG 600
TTCTTGGTAT TCTTGAGCTC CTCAAAGTCC ACAAGCGTGT GTTGTACATA GACATTGATA 660
TTCACCATGG TGATGGTGTT GAGGAGGCTT TTTTCACCAC AGATAGAGTC ATGACAGTAT 720
CTTTCCATAA GTTTGGGGAC TTCTTTCCTG GTACGGGGCA CATCAAAGAC ATTGGTGCAA 780
ATCAGGGGAA GTACTATGCC CTAAATGTCC CATTGCATGA TGGGATGGAT GACGATAGTT 840
TCGGTAGACT ATTTCGTCCC ACAATACAAA AAGTCATGGA GGTCTACCAA CCTGATGCTG 900
TTGTTCTTCA ATGTGGGGCT GATTCATTGG CTGGAGACAG GTTGGGTTGC TTCAACCTGT 960
CTGTCAAGGG CCATGCCGCT TGCCTTAGGT ACCTCAGATC CTTCAATGTC CCTCTGATGG 1020
TTTTGGGTGG TGGAGGTTAT ACTATAAGAA ATGTCGCTAG GTGCTGGTGC TATGAGACAG 1080
CAGTTGCAGT TGGGGTAGAA CCTGAAAACA AGTTGCCTTA CAACGAGTAT TATGAATATT 1140
TTGGCCCAGA TTATACTCTT CATGTTGAAC CAAACCCCAT GGAGAATCTA AATTCACCTA 1200
GGGATCTGGA GAAGATGAGG TAATTTTACT ATTGTACTAC TTCCTGTAGT TTGAGGGCTT 1260
TCGCCATCAG ATTATCCCTC ATCCCTCATC TGGAGAAGAC AGAGTTGATA GTAGATTATC 1320
CCTGATACTG GTCCATCAAA TTGATGCCTC AGTGGACCCT TAGGGGTGGC CTAGTGGTTT 1380
GGGCTTGAGA CTTCCATGTT ACTCAAGTTC GAAACACCTT GTCAGCGAAA GCAGGGGTTT 1440
GTCTTCTGGG TTGAGCTGGT TGCACCAGGC TTGCCTAGTG CAGATTACCT CTCCTGTGTG 1500
GTTTGCGAGC TATTGCATAG GATCGGAGGT TTTACCCTAT GCGCACCCAA AGGGCAGCGG 1560
CTGTGGGTTT CCCTGGTTAT CAAAAAAAAA TGATGCCTCA GTGGTGTATA TGAGACAAAT 1620
TCTGTTATTC TGTCTGTAAC TAGATTATAC CTAAGTTGCA CGGACTCTTC ACTTTCGATG 1680
CCGCACCCGT GTCGGATTCT CCAA 1705
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sol-0082 Solyc06g071680.2.1 Solanum lycopersicum 99 0.0 781
WERAM-Viv-0108 VIT_17s0000g09070.t01 Vitis vinifera 89 0.0 695
WERAM-Glm-0046 GLYMA05G02540.1 Glycine max 86 0.0 694
WERAM-Thc-0029 EOY20838 Theobroma cacao 88 0.0 689
WERAM-Prp-0060 EMJ10303 Prunus persica 88 0.0 688
WERAM-Pot-0149 POPTR_0015s09400.1 Populus trichocarpa 86 0.0 686
WERAM-Met-0068 AES71453 Medicago truncatula 85 0.0 676
WERAM-Arl-0113 fgenesh2_kg.8__ 2309__ AT5G63110.1 Arabidopsis lyrata 85 0.0 673
WERAM-Brr-0180 Bra035858.1-P Brassica rapa 85 0.0 671
WERAM-Art-0148 AT5G63110.1 Arabidopsis thaliana 85 0.0 671
WERAM-Bro-0169 Bo9g017510.1 Brassica oleracea 84 0.0 670
WERAM-Amt-0082 ERN02510 Amborella trichopoda 83 0.0 644
WERAM-Orbr-0098 OB08G20020.1 Oryza brachyantha 80 2e-179 625
WERAM-Orr-0094 ORUFI08G12880.1 Oryza rufipogon 80 3e-179 624
WERAM-Ors-0081 OS08T0344100-01 Oryza sativa 79 7e-179 623
WERAM-Orp-0087 OPUNC08G10650.1 Oryza punctata 79 7e-179 623
WERAM-Orm-0085 OMERI08G09730.1 Oryza meridionalis 79 7e-179 623
WERAM-Ori-0098 BGIOSGA028498-PA Oryza indica 79 7e-179 623
WERAM-Orgl-0088 OGLUM08G12440.1 Oryza glumaepatula 79 7e-179 623
WERAM-Org-0090 ORGLA08G0103000.1 Oryza glaberrima 79 7e-179 623
WERAM-Zem-0077 GRMZM2G136067_P01 Zea mays 80 7e-179 623
WERAM-Sob-0102 Sb07g018230.1 Sorghum bicolor 79 6e-178 620
WERAM-Brd-0077 BRADI3G22370.1 Brachypodium distachyon 79 8e-178 620
WERAM-Tra-0274 Traes_6DS_08E9A4EDB.1 Triticum aestivum 78 2e-177 619
WERAM-Sei-0051 Si013709m Setaria italica 79 2e-177 619
WERAM-Hov-0020 MLOC_17056.1 Hordeum vulgare 79 3e-177 618
WERAM-Php-0088 PP1S351_29V6.1 Physcomitrella patens 74 4e-169 591
WERAM-Sem-0128 EFJ38890 Selaginella moellendorffii 70 2e-161 566
WERAM-Aet-0051 EMT16627 Aegilops tauschii 71 1e-156 550
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 67 3e-156 548
WERAM-Orb-0066 OBART06G19560.1 Oryza barthii 70 3e-156 548
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 67 6e-156 547
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 67 7e-156 547
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 66 1e-155 546
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 66 1e-155 546
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 66 2e-155 546
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 66 2e-155 546
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 66 2e-155 546
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 66 2e-155 546
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 66 2e-155 545
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 66 2e-155 545
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 66 3e-155 545
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 66 3e-155 545
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 66 3e-155 545
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 66 3e-155 545
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 66 4e-155 545
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 66 4e-155 545
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 67 2e-154 542
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 66 3e-154 541
WERAM-Mua-0044 GSMUA_Achr2P06520_001 Musa acuminata 83 3e-154 541
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 69 4e-154 541
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 66 7e-154 540
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 66 1e-153 540
WERAM-Poa-0013 ENSPPYP00000001838.2 Pongo abelii 65 1e-153 540
WERAM-Orni-0020 ONIVA02G09910.1 Oryza nivara 70 2e-152 536
WERAM-Meg-0047 ENSMGAP00000004521.2 Meleagris gallopavo 68 2e-152 535
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 66 2e-152 535
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 69 3e-152 535
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 67 4e-152 534
WERAM-Chs-0011 ENSCSAP00000016960.1 Chlorocebus sabaeus 67 7e-152 534
WERAM-Pat-0210 ENSPTRP00000060659.1 Pan troglodytes 67 1e-151 533
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 65 2e-151 533
WERAM-Eqc-0125 ENSECAP00000014039.1 Equus caballus 67 2e-151 532
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 66 3e-151 532
WERAM-Sus-0201 ENSSSCP00000023024.1 Sus scrofa 68 3e-151 531
WERAM-Anp-0136 ENSAPLP00000014652.1 Anas platyrhynchos 66 5e-151 531
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 68 1e-150 530
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 68 2e-150 529
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 68 2e-150 529
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 68 2e-150 529
WERAM-Ict-0111 ENSSTOP00000011457.2 Ictidomys tridecemlineatus 68 2e-150 529
WERAM-Xim-0061 ENSXMAP00000005239.1 Xiphophorus maculatus 67 2e-149 526
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 67 2e-149 525
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 67 3e-149 525
WERAM-Orn-0136 ENSONIP00000014285.1 Oreochromis niloticus 66 4e-149 525
WERAM-Xet-0050 ENSXETP00000015978.3 Xenopus tropicalis 67 5e-149 524
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 67 5e-149 524
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 67 6e-149 524
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 67 8e-149 523
WERAM-Pof-0181 ENSPFOP00000015600.1 Poecilia formosa 66 4e-148 521
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 67 4e-148 521
WERAM-Asm-0151 ENSAMXP00000014739.1 Astyanax mexicanus 67 5e-148 521
WERAM-Ten-0109 ENSTNIP00000012136.1 Tetraodon nigroviridis 67 2e-147 519
WERAM-Sah-0134 ENSSHAP00000014467.1 Sarcophilus harrisii 69 2e-147 519
WERAM-Ere-0068 ENSEEUP00000005465.1 Erinaceus europaeus 69 2e-147 519
WERAM-Fec-0156 ENSFCAP00000015379.2 Felis catus 69 3e-147 518
WERAM-Vip-0012 ENSVPAP00000001394.1 Vicugna pacos 69 3e-147 518
WERAM-Cae-0005 C53A5.3 Caenorhabditis elegans 66 5e-146 514
WERAM-Tas-0085 ENSTSYP00000008588.1 Tarsius syrichta 67 2e-143 506
WERAM-Ved-0020 EGY15146 Verticillium dahliae 62 2e-142 503
WERAM-Asf-0020 CADAFLAP00008921 Aspergillus flavus 61 2e-142 502
WERAM-Asn-0024 CADANIAP00005952 Aspergillus nidulans 61 2e-142 502
WERAM-Asni-0020 CADANGAP00005938 Aspergillus niger 61 5e-142 501
WERAM-Scs-0023 EDO03342 Sclerotinia sclerotiorum 62 5e-142 501
WERAM-Prc-0059 ENSPCAP00000005589.1 Procavia capensis 65 3e-141 498
WERAM-Kop-0004 CAY67954 Komagataella pastoris 62 6e-141 497
WERAM-Asfu-0015 CADAFUAP00003503 Aspergillus fumigatus 61 6e-141 497
WERAM-Coi-0024 EAS33504 Coccidioides immitis 60 1e-140 496
WERAM-Caj-0052 ENSCJAP00000008409.2 Callithrix jacchus 68 1e-140 496
WERAM-Ora-0034 ENSOANP00000005760.2 Ornithorhynchus anatinus 68 5e-140 494
WERAM-Asc-0037 CADACLAP00008612 Aspergillus clavatus 60 5e-140 494
WERAM-Trv-0003 EHK19072 Trichoderma virens 61 5e-140 494
WERAM-Sac-0039 YNL330C Saccharomyces cerevisiae 62 1e-139 493
WERAM-Cag-0003 CAG57932 Candida glabrata 61 1e-139 493
WERAM-Spr-0005 CBQ70764 Sporisorium reilianum 63 2e-139 493
WERAM-Trr-0017 EGR48353 Trichoderma reesei 61 3e-139 491
WERAM-Gag-0026 GGTG_08607T0 Gaeumannomyces graminis 60 6e-139 491
WERAM-Kll-0018 CAG99124 Kluyveromyces lactis 61 7e-139 491
WERAM-Caa-0018 KGT69072 Candida albicans 61 1e-138 489
WERAM-Map-0015 MAPG_05105T0 Magnaporthe poae 60 2e-138 489
WERAM-Asg-0034 AAS54885 Ashbya gossypii 61 7e-138 487
WERAM-Mao-0017 MGG_05857T0 Magnaporthe oryzae 61 1e-137 487
WERAM-Pyt-0025 EFQ89270 Pyrenophora teres 59 5e-137 484
WERAM-Yal-0022 CAG79885 Yarrowia lipolytica 61 6e-137 484
WERAM-Mae-0030 ENSMEUP00000002192.1 Macropus eugenii 69 6e-137 484
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 65 1e-136 483
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 61 2e-136 482
WERAM-Pytr-0033 EDU43668 Pyrenophora triticirepentis 59 3e-136 482
WERAM-Chg-0005 EAQ93036 Chaetomium globosum 58 9e-136 480
WERAM-Phn-0005 SNOT_00508 Phaeosphaeria nodorum 60 1e-135 479
WERAM-Lem-0026 CBX91288 Leptosphaeria maculans 60 3e-135 479
Created Date 25-Jun-2016