| Tag |
Content |
| WERAM ID |
WERAM-Sot-0054 |
| Ensembl Protein ID |
PGSC0003DMT400046818 |
| Gene Name |
PGSC0003DMG400018178 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
3.90e-156 |
520.8 |
22 |
340 |
|
| Organism |
Solanum tuberosum |
| Domain Profile |
HDAC Class-I
class-1.txt 1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae.elsk.elkkfn 87
++v+y++d+++gey+ygq+h mkp+r++++h+L+lny+l++k+ei++p a++ee+ fhs +y+efl++v+pe + ++ + + ++fn
PGSC0003DMT400046818 22 RRVSYFFDSSIGEYYYGQGHLMKPHRIRVAHNLILNYNLHRKMEIIQPFPATKEEIGWFHSSDYVEFLSSVSPEIVNdKYDSyQRRRFN 110
589***********************************************************************8873454348899** PP
class-1.txt 88 vge.....dcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhh 171
vg+ dcP+f glf++cq+++G+s+ aa+kLn++eadiainwaGGlhhakkseasGfcyvnDivl+ilellk hkrvly+did+hh
PGSC0003DMT400046818 111 VGSdsesfDCPLFYGLFDFCQTSAGGSIGAAAKLNRNEADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHKRVLYVDIDVHH 199
*98666778******************************************************************************** PP
class-1.txt 172 GDgveeafyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDsla 260
GDgveeafyttdrvmtvsfhk+g+ ffPgtG+++d+ga +gkyya+n Pl++gidDes++++f++vi+kv+e+++PeavvlqcGaDsla
PGSC0003DMT400046818 200 GDGVEEAFYTTDRVMTVSFHKFGD-FFPGTGHVKDIGASTGKYYALNAPLNNGIDDESFRSLFRPVIQKVMEVYQPEAVVLQCGADSLA 287
************************.**************************************************************** PP
class-1.txt 261 gDrlgefnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
gDrlg+fnls+kgha+c++f++sfn+pl++lGGGGYt++nvaRcw+yetav++
PGSC0003DMT400046818 288 GDRLGVFNLSVKGHADCIRFLRSFNVPLMMLGGGGYTVKNVARCWCYETAVAV 340
**************************************************986 PP
|
Protein Sequence
(Fasta) | MDSSVVEGGA SLRSPGTDAT NRRVSYFFDS SIGEYYYGQG HLMKPHRIRV AHNLILNYNL 60
HRKMEIIQPF PATKEEIGWF HSSDYVEFLS SVSPEIVNDK YDSYQRRRFN VGSDSESFDC 120
PLFYGLFDFC QTSAGGSIGA AAKLNRNEAD IAINWAGGLH HAKKSEASGF CYVNDIVLGI 180
LELLKVHKRV LYVDIDVHHG DGVEEAFYTT DRVMTVSFHK FGDFFPGTGH VKDIGASTGK 240
YYALNAPLNN GIDDESFRSL FRPVIQKVME VYQPEAVVLQ CGADSLAGDR LGVFNLSVKG 300
HADCIRFLRS FNVPLMMLGG GGYTVKNVAR CWCYETAVAV GVEPDNDLPY SEFYEYFAPD 360
YILYHESLPM KNENSPSELE RIRNTLLEQL SHLPHVPSVP FQVTPSVTEV PEKEDENMDQ 420
RPKPGIQMSQ DYDTDDEEKS NNGKFSNYYN YFNNEN 456Protein Fasta Sequence
>PGSC0003DMT400046818|Class-I|Solanum tuberosum
MDSSVVEGGASLRSPGTDATNRRVSYFFDSSIGEYYYGQGHLMKPHRIRVAHNLILNYNLHRKMEIIQPFPATKEEIGWFHSSDYVEFLSSVSPEIVNDKYDSYQRRRFNVGSDSESFDCPLFYGLFDFCQTSAGGSIGAAAKLNRNEADIAINWAGGLHHAKKSEASGFCYVNDIVLGILELLKVHKRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGTGHVKDIGASTGKYYALNAPLNNGIDDESFRSLFRPVIQKVMEVYQPEAVVLQCGADSLAGDRLGVFNLSVKGHADCIRFLRSFNVPLMMLGGGGYTVKNVARCWCYETAVAVGVEPDNDLPYSEFYEYFAPDYILYHESLPMKNENSPSELERIRNTLLEQLSHLPHVPSVPFQVTPSVTEVPEKEDENMDQRPKPGIQMSQDYDTDDEEKSNNGKFSNYYNYFNNEN |
Nucleotide Sequence
(Fasta) | GTTTCCGACT ATAACAAGGA TTTGGAGCTT TTTTCCTATA AAAAGCGACT CCCTCTATTC 60
TCTCTTTTGT ATTTCTAAAA TTTACGAAAG ATTTCTATAA GTTAACAAAC TTTACCAGTT 120
TACAGCAATC GCAATGGATT CTTCAGTCGT GGAGGGCGGC GCGTCGCTCC GTTCGCCAGG 180
TACCGACGCT ACAAACCGCC GTGTTTCTTA TTTCTTCGAC TCTTCCATCG GCGAGTATTA 240
TTACGGCCAG GGTCATCTAA TGAAGCCTCA CCGTATTCGT GTTGCCCACA ATCTTATTTT 300
AAACTATAAT CTTCACCGTA AGATGGAGAT AATTCAACCG TTTCCGGCGA CTAAGGAGGA 360
AATCGGATGG TTCCACTCGT CGGACTATGT GGAGTTTCTC TCTTCAGTTT CTCCGGAGAT 420
TGTTAATGAT AAGTACGATT CCTACCAACG TAGACGCTTC AATGTCGGTT CGGACTCGGA 480
AAGCTTTGAC TGCCCTCTTT TTTATGGTCT TTTTGATTTT TGTCAAACTT CAGCTGGTGG 540
CTCAATTGGC GCCGCCGCTA AGCTTAATCG GAATGAAGCT GATATAGCTA TCAATTGGGC 600
TGGTGGGTTG CATCATGCAA AGAAAAGTGA AGCTTCTGGA TTTTGCTATG TCAATGATAT 660
TGTTCTTGGA ATTCTAGAAC TTCTCAAGGT CCACAAGCGT GTATTGTATG TAGACATTGA 720
TGTTCATCAT GGGGATGGAG TTGAGGAGGC TTTTTACACC ACTGATCGGG TTATGACAGT 780
GTCTTTTCAT AAGTTTGGAG ACTTCTTTCC TGGTACAGGG CATGTCAAAG ACATTGGTGC 840
AAGTACCGGG AAGTACTATG CCTTAAATGC ACCATTGAAT AATGGTATTG ATGATGAAAG 900
TTTCCGTAGT CTATTCCGTC CTGTAATCCA AAAAGTGATG GAGGTTTATC AACCTGAAGC 960
TGTTGTTCTT CAATGTGGTG CTGATTCACT AGCCGGAGAC AGGCTGGGTG TCTTTAACTT 1020
GTCTGTCAAA GGCCATGCAG ATTGCATTCG ATTCCTCAGG TCTTTCAATG TCCCTTTAAT 1080
GATGTTGGGT GGTGGAGGTT ATACTGTTAA AAATGTTGCT CGGTGCTGGT GCTATGAGAC 1140
AGCAGTTGCA GTTGGAGTAG AGCCTGATAA TGATTTGCCT TACAGTGAGT TTTACGAGTA 1200
TTTTGCCCCT GATTATATTC TATATCATGA ATCATTACCC ATGAAGAATG AGAATTCTCC 1260
CTCGGAACTA GAGAGGATCA GGAACACTTT GCTGGAGCAA CTCTCGCATT TACCCCATGT 1320
ACCTAGTGTT CCATTTCAAG TGACACCTTC CGTAACAGAA GTTCCAGAAA AGGAAGACGA 1380
AAATATGGAT CAAAGGCCTA AGCCAGGGAT ACAGATGAGC CAGGATTACG ATACTGATGA 1440
CGAGGAGAAG TCAAATAACG GAAAGTTCAG TAATTACTAC AATTACTTCA ACAATGAGAA 1500
CTGACATGAG GTTACTTTCA ATACAAAGTC AAAAATGAGG ACATGATTTG ATTGGAGGCC 1560
TCTGAGACTA AGCTGTTCAA CATGTGTCTA TTAACAAATT TTCTGTTTAG TTTGGATGAG 1620
AAATGATAGA AACTCATAGT AAGATGTTAT TTGTAGTGAT GTAATTATAA TATACATTAT 1680
AACTTTGTTT ATTTGGTGAA TAGAGATATG AGCATATACT TAAGTTATTC GAGAAAATGA 1740
GCAACATACT CG
1753Nucleotide Fasta Sequence
>PGSC0003DMT400046818|Class-I|Solanum tuberosum
GTTTCCGACTATAACAAGGATTTGGAGCTTTTTTCCTATAAAAAGCGACTCCCTCTATTCTCTCTTTTGTATTTCTAAAATTTACGAAAGATTTCTATAAGTTAACAAACTTTACCAGTTTACAGCAATCGCAATGGATTCTTCAGTCGTGGAGGGCGGCGCGTCGCTCCGTTCGCCAGGTACCGACGCTACAAACCGCCGTGTTTCTTATTTCTTCGACTCTTCCATCGGCGAGTATTATTACGGCCAGGGTCATCTAATGAAGCCTCACCGTATTCGTGTTGCCCACAATCTTATTTTAAACTATAATCTTCACCGTAAGATGGAGATAATTCAACCGTTTCCGGCGACTAAGGAGGAAATCGGATGGTTCCACTCGTCGGACTATGTGGAGTTTCTCTCTTCAGTTTCTCCGGAGATTGTTAATGATAAGTACGATTCCTACCAACGTAGACGCTTCAATGTCGGTTCGGACTCGGAAAGCTTTGACTGCCCTCTTTTTTATGGTCTTTTTGATTTTTGTCAAACTTCAGCTGGTGGCTCAATTGGCGCCGCCGCTAAGCTTAATCGGAATGAAGCTGATATAGCTATCAATTGGGCTGGTGGGTTGCATCATGCAAAGAAAAGTGAAGCTTCTGGATTTTGCTATGTCAATGATATTGTTCTTGGAATTCTAGAACTTCTCAAGGTCCACAAGCGTGTATTGTATGTAGACATTGATGTTCATCATGGGGATGGAGTTGAGGAGGCTTTTTACACCACTGATCGGGTTATGACAGTGTCTTTTCATAAGTTTGGAGACTTCTTTCCTGGTACAGGGCATGTCAAAGACATTGGTGCAAGTACCGGGAAGTACTATGCCTTAAATGCACCATTGAATAATGGTATTGATGATGAAAGTTTCCGTAGTCTATTCCGTCCTGTAATCCAAAAAGTGATGGAGGTTTATCAACCTGAAGCTGTTGTTCTTCAATGTGGTGCTGATTCACTAGCCGGAGACAGGCTGGGTGTCTTTAACTTGTCTGTCAAAGGCCATGCAGATTGCATTCGATTCCTCAGGTCTTTCAATGTCCCTTTAATGATGTTGGGTGGTGGAGGTTATACTGTTAAAAATGTTGCTCGGTGCTGGTGCTATGAGACAGCAGTTGCAGTTGGAGTAGAGCCTGATAATGATTTGCCTTACAGTGAGTTTTACGAGTATTTTGCCCCTGATTATATTCTATATCATGAATCATTACCCATGAAGAATGAGAATTCTCCCTCGGAACTAGAGAGGATCAGGAACACTTTGCTGGAGCAACTCTCGCATTTACCCCATGTACCTAGTGTTCCATTTCAAGTGACACCTTCCGTAACAGAAGTTCCAGAAAAGGAAGACGAAAATATGGATCAAAGGCCTAAGCCAGGGATACAGATGAGCCAGGATTACGATACTGATGACGAGGAGAAGTCAAATAACGGAAAGTTCAGTAATTACTACAATTACTTCAACAATGAGAACTGACATGAGGTTACTTTCAATACAAAGTCAAAAATGAGGACATGATTTGATTGGAGGCCTCTGAGACTAAGCTGTTCAACATGTGTCTATTAACAAATTTTCTGTTTAGTTTGGATGAGAAATGATAGAAACTCATAGTAAGATGTTATTTGTAGTGATGTAATTATAATATACATTATAACTTTGTTTATTTGGTGAATAGAGATATGAGCATATACTTAAGTTATTCGAGAAAATGAGCAACATACTCG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
