WERAM Information

Tag Content
WERAM ID WERAM-Orb-0024
Ensembl Protein ID OBART02G20890.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
OBART02G20890 OBART02G20890.1 OBART02G20890.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.40e-11 44.6 214 263
Organism Oryza barthii
Domain Profile
  Me_Reader PHD
          PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                      +C +Cg+++++ +++++Cd C++wfH+kCv ++  +++  k++ Cp C  
  OBART02G20890.1 214 MCGACGETYANGEFWICCDVCEKWFHGKCVRITPAKAEHIKQYKCPGCSS 263
                      7**********99********************555554479******75 PP
Protein Sequence
(Fasta)		MDEGGGAGAA AAAAGNAAGA AAVHHNARSA EDVFRDFRAR RAGIVKALTT DVEKFYRQCD 60
PEKENLCLYG LPNETWDVTL PAEEVPPELP EPALGINFAR DGMIEKDWLS LVAVHSDAWL 120
LSVAFYFGAR FGFDKEARRR LFTMINGLPT VYEVVTGIAK KQTKVSNGSS KSNKSNPKPS 180
KQSNSNSKPA KPPQPKDEED SGPEGAEDED QAYMCGACGE TYANGEFWIC CDVCEKWFHG 240
KCVRITPAKA EHIKQYKCPG CSSKRSRE 268
Nucleotide Sequence
(Fasta)		ATCCTCTCTC GCTCTCCACT ACGAGGCCAC CACCACCACC ACTCTCGCTC GCTCCCCCCA 60
CTCCCACTCG CCTGAAACCC TAGCAAGGAG CTCCCGGCGG ATGGACGAGG GAGGCGGCGC 120
TGGTGCTGCG GCTGCCGCCG CCGGGAACGC GGCGGGGGCG GCGGCGGTGC ACCACAACGC 180
GCGGTCCGCG GAGGACGTCT TCCGCGACTT CCGCGCGCGC CGCGCGGGCA TCGTCAAGGC 240
GCTCACCACC GATGTGGAGA AGTTCTACCG GCAGTGCGAC CCCGAGAAAG AGAACCTGTG 300
CCTTTATGGA TTGCCCAATG AGACCTGGGA CGTGACCCTT CCAGCTGAGG AAGTACCTCC 360
TGAACTTCCA GAACCAGCAC TGGGCATAAA CTTTGCTCGT GATGGAATGA TCGAAAAAGA 420
TTGGTTGTCG CTGGTTGCAG TTCATAGCGA TGCATGGCTA CTGTCTGTAG CATTTTACTT 480
TGGGGCTCGC TTTGGATTTG ATAAGGAAGC CAGGAGACGG CTCTTCACCA TGATTAATGG 540
TCTTCCCACT GTATATGAAG TTGTGACGGG AATCGCCAAG AAGCAAACAA AAGTCTCCAA 600
TGGCAGCAGC AAAAGCAACA AGTCCAACCC TAAACCATCG AAGCAATCCA ATTCTAACAG 660
CAAGCCTGCA AAGCCACCTC AGCCGAAAGA TGAGGAAGAC AGCGGCCCAG AAGGCGCGGA 720
GGATGAGGAC CAGGCTTACA TGTGTGGCGC TTGCGGAGAG ACTTACGCGA ACGGTGAGTT 780
CTGGATCTGC TGCGACGTCT GCGAGAAGTG GTTCCATGGC AAATGCGTTC GGATCACCCC 840
TGCGAAGGCA GAGCACATCA AGCAGTACAA GTGCCCTGGC TGCAGCAGCA AGAGGAGCCG 900
AGAATGACCA CGGGAGGCTC CCGGTTGACA TGTTTTAGAA TCGTTAGGAA TTGGTGAAGA 960
GGCGGAGAAC CGCTTCACCC GCAACCTGCT GCCGTGCAGC AGCAGACCCG GCGTGCAGGC 1020
CGGTTGTTGT ATTAGTTTCA GTCATTGTGT TGTACCCGAC ATGGTAAGTA GCTATTGTAT 1080
TTAGCAGGCA GGCAGGCTAA CTGCTGTGGT CGTAGTGTGA TGTGAACCTC TATGAGAGAG 1140
TTGGATACTC TCGGTGTTCA GTAGTGATTT AGTTATGGGT TAGTGTGTAT GATTCTATGA 1200
TAACTGCTTC CCCTTTCCTG AGGTTTCTAC CCTGTCTTGG CTCCTTTATT TGTTTTTTTT 1260
TTTTTGTGGG ACTTTTGGTT GCTGATGTTC AACAGTTCAA GACTTGACAA CACCAGCTTC 1320
TTGGACAAGT TCAGGAACCC ATCGTCAAGT GCATGTCTTT CTTCAAGCAG GTTCGAAAGG 1380
AAAAGAAAAA ACAGAGGCAG AAACATTGTA TATTTGTAGA TAGATTATAT GTGTGAGCAG 1440
AACAACAAAG AAATACAGTA TACAATACAA ACCATTACTT TCCATCAGTG CTTTAGGCCC 1500
CCTTTGAATT GAAGGAATTG AAATCCTACA CAATTCATGC ATTTGATCCT GTATACTAGG 1560
GTGTAATTGG CACGGTGTTT TAATCGATAC ATGCGATGTA ATTGGCTCCA TTGATGCTTG 1620
A 1622
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orm-0026 OMERI02G20640.1 Oryza meridionalis 100 1e-114 409
WERAM-Orr-0023 ORUFI02G21900.1 Oryza rufipogon 100 2e-113 405
WERAM-Orni-0023 ONIVA02G22970.1 Oryza nivara 100 2e-113 405
WERAM-Ori-0026 BGIOSGA008446-PA Oryza indica 100 2e-113 405
WERAM-Orgl-0025 OGLUM02G21140.1 Oryza glumaepatula 100 2e-113 405
WERAM-Org-0024 ORGLA02G0179500.1 Oryza glaberrima 100 2e-113 405
WERAM-Ors-0022 OS02T0564100-01 Oryza sativa 100 4e-113 404
WERAM-Orp-0023 OPUNC02G18840.1 Oryza punctata 91 1e-111 399
WERAM-Lep-0029 LPERR02G16910.1 Leersia perrieri 96 1e-110 396
WERAM-Orbr-0027 OB02G28450.1 Oryza brachyantha 96 3e-109 391
WERAM-Brd-0086 BRADI3G46110.1 Brachypodium distachyon 89 6e-105 377
WERAM-Sob-0072 Sb04g023220.1 Sorghum bicolor 90 4e-104 374
WERAM-Zem-0065 GRMZM2G107807_P01 Zea mays 89 3e-102 368
WERAM-Mua-0010 GSMUA_Achr10P16300_001 Musa acuminata 71 7e-91 330
WERAM-Orl-0073 KN539572.1_FGP001 Oryza longistaminata 100 1e-89 326
WERAM-Sei-0038 Si010902m Setaria italica 70 1e-85 313
WERAM-Viv-0077 VIT_12s0035g01980.t01 Vitis vinifera 69 2e-85 312
WERAM-Sot-0014 PGSC0003DMT400012523 Solanum tuberosum 67 1e-81 300
WERAM-Sol-0017 Solyc01g102750.2.1 Solanum lycopersicum 70 9e-81 297
WERAM-Amt-0088 ERM99796 Amborella trichopoda 66 9e-81 297
WERAM-Glm-0179 GLYMA14G11400.1 Glycine max 67 1e-80 296
WERAM-Thc-0077 EOY27191 Theobroma cacao 70 1e-80 296
WERAM-Pot-0079 POPTR_0006s23990.1 Populus trichocarpa 67 3e-80 295
WERAM-Prp-0082 EMJ27202 Prunus persica 64 1e-77 286
WERAM-Arl-0138 scaffold_602145.1 Arabidopsis lyrata 63 6e-77 284
WERAM-Hov-0037 MLOC_37761.1 Hordeum vulgare 62 2e-76 283
WERAM-Art-0125 AT5G20510.1 Arabidopsis thaliana 62 3e-76 282
WERAM-Met-0172 KEH18446 Medicago truncatula 63 4e-76 281
WERAM-Aet-0106 EMT19247 Aegilops tauschii 61 8e-76 280
WERAM-Brr-0124 Bra024817.1-P Brassica rapa 64 5e-75 278
WERAM-Bro-0177 Bo9g072730.1 Brassica oleracea 64 3e-74 275
WERAM-Tra-0353 TRAES3BF138600040CFD_t1 Triticum aestivum 65 2e-73 273
WERAM-Php-0137 PP1S97_167V6.1 Physcomitrella patens 65 1e-69 260
WERAM-Sem-0105 EFJ23237 Selaginella moellendorffii 62 2e-66 249
Created Date 25-Jun-2016