WERAM Information


Tag Content
WERAM ID WERAM-Sus-0129
Ensembl Protein ID ENSSSCP00000018401.2
Gene Name HDAC5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSSSCG00000017366.2 ENSSSCT00000018905.2 ENSSSCP00000018401.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.10e-148 495.1 223 563
HDAC Class-I 2.00e-30 106.8 242 533
Organism Sus scrofa
Domain Profile
  HDAC Class-II

           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
+g+vyd+ mlkhq++++n++ hpE+++Riq+i+srlqe+gll+k+e++++rkat++e+q+vHse h+ l++t+ +l++++l+s
ENSSSCP00000018401.2 223 TGVVYDTFMLKHQCMCGNTHVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSEYHTLLYGTS-PLNRQKLDSkkllgp 310
79**********************************************************************9.*************** PP
class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160
++vdsd++++e++s++a+r+avG+++el++kv++gelkngfa++RPPGHHaeestamGFC+fn+va+++kllqqkl
ENSSSCP00000018401.2 311 isqkmyavlpcggIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVAAGELKNGFAIIRPPGHHAEESTAMGFCFFNSVAITTKLLQQKL 399
***************************************************************************************** PP
class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246
+v k+livDwD+HhGnGtq++fy+dp+vly+SlHRyd+g+ffp gsga++evg g+g+g+nvNvaw+gg+ +gd eyl+afr+vv+
ENSSSCP00000018401.2 400 NVGKVLIVDWDIHHGNGTQQAFYNDPSVLYISLHRYDNGNFFP--GSGAPEEVGGGPGVGYNVNVAWTGGVdppIGDVEYLTAFRTVVM 486
*******************************************..******************************************** PP
class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLl 321
pia+eF+Pd+vlvsaGfDa+eg +plgg+svta+c+++lt+ql++laggrvvl+lEGG++l+ai++a+ea+v+aLl
ENSSSCP00000018401.2 487 PIAHEFSPDVVLVSAGFDAVEGhlSPLGGYSVTARCFGHLTRQLMTLAGGRVVLALEGGHDLTAICDASEACVSALL 563
**********************99***************************************************98 PP

  HDAC Class-I

           class-1.txt  18 qkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenae.............elskelkkfnvgedc. 92 
+ hp r++ + + + + gl k e+++ +ka+ +e++++hse y ++l +p n + ++ l ++g d+
ENSSSCP00000018401.2 242 HVHPEHAGRIQSIWSRLQETGLLSKCERIRGRKATLDEIQTVHSE-YHTLLYGTSPLNRQkldskkllgpisqKMYAVLPCGGIGVDSd 329
456777778888888888999999999999999999999998875.5566666665555534444344433222222222224555652 PP
class-1.txt 93 Pvfdglfeyc..qlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellkkhk..rvlyididlhhGDgv 175
v +++++ + ++ G +e a k+ +e + ai G hha s a Gfc+ n + ++ l++k++ +vl +d d+hhG+g
ENSSSCP00000018401.2 330 TVWNEMHSSSavRMAVGCLVELAFKVAAGELKngFAIIRPPG-HHAEESTAMGFCFFNSVAITTKLLQQKLNvgKVLIVDWDIHHGNGT 417
467777765511456788899999998877652256665555.9******************9988888654449************** PP
class-1.txt 176 eeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDsl 259
++afy+ v+ +s+h+y++ +ffPg+G ++vg + g y vnv + g+d D +y + f++v+ ++ + f+P++v++ G D++
ENSSSCP00000018401.2 418 QQAFYNDPSVLYISLHRYDNgNFFPGSGAPEEVGGGPGVGYNVNVAWTGGVDppigDVEYLTAFRTVVMPIAHEFSPDVVLVSAGFDAV 506
******************8746************************99997666669******************************** PP
class-1.txt 260 ag..Drlgefnlsikghaecvkfvksf 284
g +lg ++++ + +++ + + +
ENSSSCP00000018401.2 507 EGhlSPLGGYSVTARCFGHLTRQLMTL 533
8733589*****999999876655544 PP

Protein Sequence
(Fasta)
VPLHGQSPLV TGERVATSMR TVGKLPRHRP LSRTQSSPLP QSPQALQQLV MQQQHQQFLE 60
KQKQQQLQLG KILTKTGELP RQPTTHPEET EEELTEQQEA LLGEGALTIP REGSTESEST 120
QEDLEEEEEE EEEEEEEEED CIQVKDEAGE SGAEEGPDLE ESSAGYKKVF ADAQQLQPLQ 180
VYQAPLSLAT VPHQALGRTQ SSPAAPGGMK SPPDQPTKHL FTTGVVYDTF MLKHQCMCGN 240
THVHPEHAGR IQSIWSRLQE TGLLSKCERI RGRKATLDEI QTVHSEYHTL LYGTSPLNRQ 300
KLDSKKLLGP ISQKMYAVLP CGGIGVDSDT VWNEMHSSSA VRMAVGCLVE LAFKVAAGEL 360
KNGFAIIRPP GHHAEESTAM GFCFFNSVAI TTKLLQQKLN VGKVLIVDWD IHHGNGTQQA 420
FYNDPSVLYI SLHRYDNGNF FPGSGAPEEV GGGPGVGYNV NVAWTGGVDP PIGDVEYLTA 480
FRTVVMPIAH EFSPDVVLVS AGFDAVEGHL SPLGGYSVTA RCFGHLTRQL MTLAGGRVVL 540
ALEGGHDLTA ICDASEACVS ALLSVELQPL DEAVLQQKPN INAVATLEKV IGIQSKHWSC 600
VQRFAAGLGR SLREAQAGET EEAETVSAMA LLSVGAEQAQ AAAAREHSPR PAEEPMEQEP 660
AL 662
Nucleotide Sequence
(Fasta)
AGCACAGCTT TGGACAGTCA GTCTATGAGT AGCTGGTGGT ATGCAAAGAG GTCCTGCTTA 60
AAAGACACGT GATCCTTCCC AGCCAGGCAG AGCCAAGTCC ATGGTCAGGG AGGTGTCTTG 120
CAGTTGGAGA GAGCACTAGT CCTTGTTCAC TCTCACAGAG GGCCTGAGAC TATCTGTGCA 180
GTAGTAACTG AATCAAAAGG AGAGAATGGT GAATCCAGGA AGGCTGGCTG GAGGCAGTGG 240
CTCTGAGCTG TAAGACTGTT TGATTGTGGG GAGGAAGAGG GAGATCCAGG TTTGGGGGCA 300
GCATTCCCCA GGCCCCTCCT AGTTTTCTCC TGAGTATGTA GGTGGATGCG TTCTAGGTGA 360
GGGAGCATCT GGGGGTGGGA GGGGGGAGCC TGATGCCCTG ACAGTGAGGG TTACTCCCCC 420
CCCCACAGTG CCACTCCACG GGCAGTCCCC GCTGGTGACG GGTGAACGCG TGGCCACCAG 480
CATGCGGACG GTGGGCAAGC TCCCAAGGCA CCGGCCCCTG AGCCGCACTC AGTCCTCGCC 540
GCTGCCCCAG AGCCCCCAGG CCCTGCAGCA GCTGGTCATG CAGCAGCAGC ACCAGCAGTT 600
CCTGGAGAAG CAGAAGCAGC AACAGCTGCA GCTGGGCAAG ATCCTCACCA AGACTGGGGA 660
GCTGCCCCGG CAGCCCACCA CCCACCCGGA GGAGACAGAG GAGGAGCTGA CGGAGCAGCA 720
GGAGGCCTTG CTGGGGGAGG GAGCCCTGAC CATCCCCCGA GAAGGCTCCA CGGAGAGCGA 780
GAGCACGCAG GAAGACCTGG AGGAGGAGGA AGAGGAGGAG GAGGAAGAGG AGGAGGAGGA 840
GGAGGATTGT ATCCAGGTCA AGGATGAGGC GGGCGAGAGT GGTGCTGAGG AGGGCCCCGA 900
CTTGGAGGAG TCCAGTGCTG GTTACAAAAA GGTGTTTGCA GATGCCCAGC AGCTGCAGCC 960
GCTGCAGGTG TACCAGGCAC CCCTCAGCCT GGCCACTGTG CCCCACCAGG CCCTGGGCCG 1020
CACCCAGTCC TCACCTGCTG CCCCAGGGGG CATGAAGAGC CCCCCAGACC AGCCCACCAA 1080
GCACCTCTTC ACCACAGGTG TGGTCTACGA CACGTTCATG CTGAAGCACC AGTGCATGTG 1140
CGGGAACACA CACGTGCACC CGGAGCACGC TGGCCGGATT CAGAGCATCT GGTCCCGGCT 1200
GCAGGAAACA GGCCTGCTCA GCAAGTGTGA GCGGATTCGG GGTCGCAAAG CCACGCTGGA 1260
CGAGATCCAG ACGGTGCACT CCGAGTACCA CACCCTGCTC TATGGGACCA GCCCCCTCAA 1320
CCGCCAGAAG CTGGACAGCA AGAAGCTGCT GGGCCCCATC AGCCAGAAGA TGTATGCTGT 1380
GCTGCCCTGC GGGGGCATCG GGGTGGACAG CGACACAGTG TGGAATGAGA TGCACTCCTC 1440
CAGTGCTGTG CGCATGGCGG TGGGCTGCCT GGTGGAGCTG GCATTCAAGG TGGCTGCGGG 1500
GGAGCTCAAG AATGGATTTG CCATCATCCG GCCCCCAGGC CACCACGCGG AGGAATCCAC 1560
AGCCATGGGA TTCTGCTTCT TCAACTCTGT AGCCATCACA ACCAAACTTC TGCAGCAGAA 1620
GCTGAACGTG GGCAAGGTTC TCATCGTGGA CTGGGACATA CACCACGGCA ATGGCACCCA 1680
GCAAGCATTC TACAACGACC CCTCCGTGCT CTATATCTCT CTGCATCGCT ATGACAATGG 1740
GAACTTCTTT CCAGGCTCTG GGGCTCCTGA AGAGGTTGGC GGAGGGCCGG GTGTGGGGTA 1800
CAATGTGAAC GTGGCATGGA CGGGAGGTGT GGACCCCCCC ATCGGAGACG TGGAGTACCT 1860
AACGGCCTTC AGGACAGTGG TGATGCCCAT CGCCCACGAG TTCTCACCTG ACGTGGTCCT 1920
GGTTTCCGCC GGGTTTGATG CTGTTGAGGG ACACTTGTCT CCGTTGGGTG GCTACTCTGT 1980
CACCGCCAGA TGTTTTGGCC ACTTGACCAG GCAGCTGATG ACGCTGGCAG GGGGCCGGGT 2040
GGTGCTGGCC CTGGAGGGAG GCCATGACTT GACCGCCATC TGTGATGCCT CTGAGGCCTG 2100
TGTCTCAGCT CTGCTCAGCG TGGAGCTGCA GCCCTTGGAC GAGGCAGTCC TGCAACAAAA 2160
GCCCAACATC AATGCAGTGG CCACGCTAGA GAAAGTCATC GGGATCCAGA GCAAACACTG 2220
GAGCTGTGTG CAGAGGTTCG CTGCTGGTCT AGGCCGTTCC CTGCGGGAGG CCCAGGCAGG 2280
CGAGACAGAG GAGGCCGAGA CTGTGAGCGC CATGGCCTTG CTGTCGGTGG GGGCCGAGCA 2340
GGCGCAGGCT GCTGCAGCCC GGGAGCACAG CCCCAGGCCG GCAGAGGAGC CCATGGAGCA 2400
GGAGCCTGCC CTGTGA 2417
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bot-0149 ENSBTAP00000053450.2 Bos taurus 98 0.0 1052
WERAM-Ova-0067 ENSOARP00000007394.1 Ovis aries 98 0.0 1050
WERAM-Fec-0025 ENSFCAP00000002029.3 Felis catus 99 0.0 1042
WERAM-Ict-0187 ENSSTOP00000016795.1 Ictidomys tridecemlineatus 96 0.0 1040
WERAM-Caf-0149 ENSCAFP00000021172.4 Canis familiaris 99 0.0 1039
WERAM-Tut-0123 ENSTTRP00000009926.1 Tursiops truncatus 98 0.0 1038
WERAM-Mum-0019 ENSMUSP00000102770.2 Mus musculus 96 0.0 1037
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 98 0.0 1035
WERAM-Myl-0072 ENSMLUP00000005848.2 Myotis lucifugus 98 0.0 1026
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 98 0.0 1026
WERAM-Hos-0075 ENSP00000468004.1 Homo sapiens 97 0.0 1024
WERAM-Aim-0213 ENSAMEP00000019373.1 Ailuropoda melanoleuca 98 0.0 1022
WERAM-Dan-0156 ENSDNOP00000017844.1 Dasypus novemcinctus 96 0.0 1022
WERAM-Poa-0072 ENSPPYP00000009379.1 Pongo abelii 97 0.0 1021
WERAM-Chs-0039 ENSCSAP00000014557.1 Chlorocebus sabaeus 97 0.0 1021
WERAM-Mam-0051 ENSMMUP00000008945.2 Macaca mulatta 97 0.0 1021
WERAM-Otg-0108 ENSOGAP00000009396.2 Otolemur garnettii 97 0.0 1019
WERAM-Caj-0108 ENSCJAP00000018977.1 Callithrix jacchus 92 0.0 1019
WERAM-Paa-0157 ENSPANP00000020771.1 Papio anubis 97 0.0 1018
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 93 0.0 1015
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 95 0.0 1014
WERAM-Ran-0140 ENSRNOP00000052059.4 Rattus norvegicus 95 0.0 1014
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 96 0.0 1010
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 96 0.0 1009
WERAM-Mup-0103 ENSMPUP00000009452.1 Mustela putorius furo 97 0.0 995
WERAM-Loa-0216 ENSLAFP00000022496.1 Loxodonta africana 95 0.0 994
WERAM-Nol-0057 ENSNLEP00000006711.1 Nomascus leucogenys 95 0.0 985
WERAM-Cap-0214 ENSCPOP00000014276.1 Cavia porcellus 88 0.0 969
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 90 0.0 945
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 97 0.0 883
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 84 0.0 862
WERAM-Pes-0126 ENSPSIP00000015149.1 Pelodiscus sinensis 83 0.0 850
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 78 0.0 825
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 83 0.0 749
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 78 0.0 747
WERAM-Sah-0166 ENSSHAP00000017733.1 Sarcophilus harrisii 91 0.0 747
WERAM-Lac-0155 ENSLACP00000018356.1 Latimeria chalumnae 69 0.0 706
WERAM-Orn-0072 ENSONIP00000007998.1 Oreochromis niloticus 74 0.0 694
WERAM-Xim-0214 ENSXMAP00000017502.1 Xiphophorus maculatus 72 0.0 692
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 73 0.0 685
WERAM-Gaga-0049 ENSGALP00000033098.3 Gallus gallus 67 0.0 680
WERAM-Xet-0027 ENSXETP00000007313.3 Xenopus tropicalis 73 0.0 680
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 67 0.0 678
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 68 0.0 678
WERAM-Ten-0172 ENSTNIP00000017010.1 Tetraodon nigroviridis 72 0.0 677
WERAM-Pof-0205 ENSPFOP00000017061.2 Poecilia formosa 73 0.0 676
WERAM-Fia-0056 ENSFALP00000004005.1 Ficedula albicollis 70 0.0 669
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 69 0.0 669
WERAM-Tar-0138 ENSTRUP00000030067.1 Takifugu rubripes 68 0.0 665
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 68 0.0 657
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 66 0.0 652
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 68 0.0 650
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 67 0.0 649
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 64 7e-180 628
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 70 3e-178 622
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 68 1e-172 603
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 66 3e-172 602
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 60 2e-160 563
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 62 1e-153 540
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 71 3e-150 529
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 61 2e-141 500
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 54 8e-138 488
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 61 1e-119 427
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 52 3e-116 416
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 50 6e-115 412
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 52 1e-107 388
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 57 5e-74 276
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 44 2e-69 260
WERAM-Crn-0010 AAW42071 Cryptococcus neoformans 36 2e-67 254
Created Date 25-Jun-2016