WERAM Information


Tag Content
WERAM ID WERAM-Pes-0126
Ensembl Protein ID ENSPSIP00000015149.1
Gene Name HDAC5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPSIG00000013308.1 ENSPSIT00000015220.1 ENSPSIP00000015149.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 8.40e-150 498.4 33 968
HDAC Class-I 2.00e-30 106.5 647 937
Organism Pelodiscus sinensis
Domain Profile
  HDAC Class-II

           class-2.txt 30 iqailsrlqeagllekleelkarkatkeelqlvHseehvel 70
+ ++ +++e++l ++l+ l+ + + +++l+ Hs + ++
ENSPSIP00000015149.1 33 VPSVDPAVREQQLQQELLVLQHEVQLQKHLKFKHSLTSRRE 73
55666678899999999999999999999999998665554 PP
class-2.txt 2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84
+g+vyd+ mlkhq++++n++ hpE+++Riq+i+srlqe+gll+k+e++++rkat++e+q+vHse+h+ l++t+ +l++++l+s
ENSPSIP00000015149.1 627 TGVVYDTFMLKHQCMCGNTNIHPEHAGRIQSIWSRLQETGLLNKCERIRGRKATLDEIQTVHSEHHTLLYGTS-PLNRQKLDSkkllgp 714
79**********************************************************************9.*************** PP
class-2.txt 85 .............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqkl 160
++vdsd++++e++s++a+r+avG+++el++kv++gelkngfav+RPPGHHaeestamGFC+fn+va++a+llqqkl
ENSPSIP00000015149.1 715 isqkmyavlpcggIGVDSDTVWNEMHSSSAVRMAVGCLVELAFKVASGELKNGFAVIRPPGHHAEESTAMGFCFFNSVAITARLLQQKL 803
***************************************************************************************** PP
class-2.txt 161 kvkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvl 246
++ kilivDwD+HhGnGtq++fy+dp+vly+SlHRyd+g+ffp gsga++evg+g g+g+nvN+aw+gg+ +gd eylaafr+vv+
ENSPSIP00000015149.1 804 SIGKILIVDWDIHHGNGTQQAFYTDPSVLYISLHRYDNGNFFP--GSGAPEEVGSGIGVGYNVNIAWTGGVeppVGDVEYLAAFRTVVM 890
*******************************************..******************************************** PP
class-2.txt 247 piakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
pia+eF+Pd+vlvsaGfDa+eg +plgg+svtakc+++ltkql+klaggrvvl+lEGG++l+ai++a+ea+v+aLlg
ENSPSIP00000015149.1 891 PIANEFSPDVVLVSAGFDAVEGhlSPLGGYSVTAKCFGHLTKQLMKLAGGRVVLALEGGHDLTAICDASEACVSALLG 968
**********************99****************************************************96 PP

  HDAC Class-I

           class-1.txt  19 khpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyief.....lkkvepenae.......elskelkkfnvgedc.Pv 94 
hp r++ + + + + gl +k e+++ +ka+ +e++++hse++ + l++ + ++++ ++ l ++g d+ v
ENSPSIP00000015149.1 647 IHPEHAGRIQSIWSRLQETGLLNKCERIRGRKATLDEIQTVHSEHHTLLygtspLNRQKLDSKKllgpisqKMYAVLPCGGIGVDSdTV 735
57777778888888888899999999999999999999999987764321111144444444445443332222222223456565246 PP
class-1.txt 95 fdglfeyc..qlitGasleaakkLnkkead..iainwaGGlhhakkseasGfcyvnDivlailellk..khkrvlyididlhhGDgvee 177
+++++ + ++ G +e a k+ ++e + a+ hha s a Gfc+ n + ++ l++ + ++l +d d+hhG+g ++
ENSPSIP00000015149.1 736 WNEMHSSSavRMAVGCLVELAFKVASGELKngFAVIRPP-GHHAEESTAMGFCFFNSVAITARLLQQklSIGKILIVDWDIHHGNGTQQ 823
777776551145678889999999988766114444444.4*******************988887734567***************** PP
class-1.txt 178 afyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavvlqcGaDslag 261
afyt v+ +s+h+y++ +ffPg+G ++vg + g y vn+ + g++ D +y + f++v+ ++ + f+P++v++ G D++ g
ENSPSIP00000015149.1 824 AFYTDPSVLYISLHRYDNgNFFPGSGAPEEVGSGIGVGYNVNIAWTGGVEppvgDVEYLAAFRTVVMPIANEFSPDVVLVSAGFDAVEG 912
****************8746***********************99988754444*********************************97 PP
class-1.txt 262 ..Drlgefnlsikghaecvkfvksf 284
+lg ++++ k +++ k + +
ENSPSIP00000015149.1 913 hlSPLGGYSVTAKCFGHLTKQLMKL 937
3359************977765554 PP

Protein Sequence
(Fasta)
AVDVKPVLPA AMQNCSSSSS SPVELRPDGR GSVPSVDPAV REQQLQQELL VLQHEVQLQK 60
HLKFKHSLTS RREMQPPSGM KAGVQASAMT SSPTSNAPSL WEGPRELKQA PLHQPILILR 120
NKEKSKESAI ASTEVKLKLQ EFLLSKSKEL AAGGFNHSLP QHPTCWGAHH TSLDQSSPPQ 180
TGSPGTPPSY KLPLLGTYDS RDDFPLRKTA SEPNLKVRSR LKQKVAERRS SPLLRRKDGT 240
VISTFKKRAI EITEPGPSPF SSVCNSAPGS GPSSPNSSSC TIAENGFTGS TPNIHTEQML 300
PPRRALAMDG SASQLNLYTS PSLPNISLGL QATVTVTKSH LNASPKLPTQ PEAERQAIPP 360
LRQGGALTGK FMRTSAPCPW LSFLSHREQG VTCPTSSHWP RAVTRHSSAS RLTRCSLLSV 420
PLHGQSPLVT GERVSANMRT VSKLPRHRPL SRTQSSPLPQ SPQALQQLVM QQQHQQFLEK 480
QKQQQIQLSK IITKAGELPR QPTTHPEETE EELTEQQEAP LVAGSPESES TQEDLEEEEG 540
CGPERDEGGE SGAEEEPIDS PEVVELGVAY KQVFPDAQQL RPIQLFPASL SIATLPHQAL 600
SRTQSSPASA GMKSPAAEPP VKHLFTTGVV YDTFMLKHQC MCGNTNIHPE HAGRIQSIWS 660
RLQETGLLNK CERIRGRKAT LDEIQTVHSE HHTLLYGTSP LNRQKLDSKK LLGPISQKMY 720
AVLPCGGIGV DSDTVWNEMH SSSAVRMAVG CLVELAFKVA SGELKNGFAV IRPPGHHAEE 780
STAMGFCFFN SVAITARLLQ QKLSIGKILI VDWDIHHGNG TQQAFYTDPS VLYISLHRYD 840
NGNFFPGSGA PEEVGSGIGV GYNVNIAWTG GVEPPVGDVE YLAAFRTVVM PIANEFSPDV 900
VLVSAGFDAV EGHLSPLGGY SVTAKCFGHL TKQLMKLAGG RVVLALEGGH DLTAICDASE 960
ACVSALLGVE LDPLDQALLQ QKPNVNAVTT LEKVIEIQSK HWSSVKRCAS VVSCSLREAQ 1020
EGEAVEAETV SAMALLSVDT EQGSTDCSPR YGSSSRVTRG ISTLTPALAS SCVSPQDVSV 1080
GCPQLAH 1087
Nucleotide Sequence
(Fasta)
GCGGTAGACG TGAAGCCAGT GCTGCCTGCA GCCATGCAGA ACTGCAGCAG CAGCAGCAGC 60
AGCCCGGTGG AGCTGCGGCC AGACGGGCGG GGGAGCGTGC CCAGCGTGGA CCCAGCAGTG 120
CGGGAGCAGC AGCTGCAGCA GGAGCTTTTG GTCCTGCAGC ACGAAGTCCA GCTGCAGAAG 180
CACCTCAAGT TCAAACATTC ATTAACATCC CGACGTGAAA TGCAGCCACC TTCGGGCATG 240
AAGGCAGGGG TGCAGGCAAG TGCCATGACT TCCTCTCCCA CCTCAAATGC CCCCAGCCTG 300
TGGGAGGGGC CCCGTGAGCT CAAGCAAGCC CCACTGCACC AGCCAATTCT CATCCTCCGG 360
AATAAGGAGA AGAGCAAAGA AAGTGCAATC GCCAGCACAG AAGTGAAGCT GAAACTCCAG 420
GAGTTCCTCC TCAGCAAGTC TAAAGAGCTG GCAGCAGGTG GCTTCAACCA TTCCCTCCCG 480
CAGCACCCCA CATGCTGGGG AGCCCATCAT ACCTCATTGG ACCAGAGTTC CCCTCCCCAG 540
ACAGGCAGCC CAGGAACACC GCCCTCCTAT AAACTACCCC TCCTCGGCAC GTACGACAGC 600
AGAGACGACT TTCCGCTCCG GAAAACTGCC TCGGAACCCA ACCTGAAAGT GCGCTCGCGG 660
TTAAAGCAGA AAGTGGCTGA GCGCAGGAGC AGCCCCCTGC TGCGGAGGAA AGACGGAACC 720
GTCATCAGCA CGTTCAAAAA GAGAGCTATC GAGATCACAG AGCCCGGTCC AAGTCCATTC 780
TCCTCCGTGT GTAACAGTGC CCCCGGGTCC GGCCCCAGCT CCCCCAACAG CTCCAGCTGC 840
ACCATCGCTG AGAACGGCTT CACCGGCTCC ACCCCCAACA TCCACACTGA GCAGATGCTC 900
CCTCCACGCA GAGCCCTGGC AATGGACGGG TCCGCTAGCC AGCTCAACCT CTACACCTCC 960
CCATCCCTGC CCAACATCTC CCTGGGACTG CAGGCAACGG TCACCGTCAC CAAGTCGCAC 1020
CTCAACGCGT CCCCGAAGCT CCCCACCCAG CCGGAGGCGG AGCGCCAGGC CATCCCGCCA 1080
CTGCGCCAAG GTGGGGCCCT GACGGGCAAG TTCATGAGGA CCTCGGCACC CTGTCCCTGG 1140
CTGTCATTCC TGAGTCACAG AGAGCAGGGA GTGACTTGCC CAACCTCCTC GCACTGGCCT 1200
AGGGCAGTCA CCCGGCACAG CTCCGCATCC CGCCTCACCC GCTGCTCTCT CCTGTCAGTG 1260
CCGCTCCATG GCCAGTCCCC GCTGGTGACG GGCGAGCGGG TCTCCGCCAA CATGAGGACG 1320
GTCAGCAAGC TGCCGCGCCA CCGCCCACTG AGCCGCACCC AGTCGTCCCC GCTGCCCCAG 1380
AGCCCCCAGG CCCTGCAGCA GCTAGTCATG CAGCAGCAGC ACCAGCAGTT CCTTGAGAAG 1440
CAGAAGCAGC AGCAGATTCA GCTCAGCAAG ATCATCACCA AGGCGGGCGA GCTGCCCCGC 1500
CAGCCCACCA CGCACCCCGA GGAGACGGAG GAGGAGCTGA CGGAGCAGCA GGAGGCCCCG 1560
CTGGTGGCCG GCTCGCCGGA GAGCGAGAGC ACGCAGGAGG ACCTGGAGGA GGAGGAGGGC 1620
TGCGGGCCGG AGAGGGACGA GGGGGGCGAA AGCGGGGCCG AAGAGGAGCC CATCGACTCG 1680
CCGGAGGTGG TGGAGCTGGG TGTGGCTTAC AAGCAGGTGT TCCCAGATGC TCAGCAGCTG 1740
CGGCCCATCC AGCTCTTCCC AGCGTCTTTG AGCATTGCCA CCCTGCCTCA CCAAGCGCTG 1800
AGCCGGACCC AGTCCTCGCC TGCCTCCGCG GGCATGAAGA GCCCTGCGGC TGAGCCCCCG 1860
GTCAAACACC TCTTCACTAC TGGCGTGGTC TACGACACTT TTATGCTAAA GCACCAGTGC 1920
ATGTGCGGGA ACACTAACAT TCACCCAGAG CATGCTGGGA GAATCCAGAG CATCTGGTCC 1980
CGGCTCCAGG AGACTGGCTT GCTGAACAAG TGTGAGCGGA TCCGGGGCAG GAAAGCCACG 2040
CTGGATGAAA TCCAGACAGT CCATTCAGAG CATCACACGT TGCTGTATGG AACCAGCCCC 2100
CTCAACCGGC AGAAACTCGA CAGCAAGAAG CTGCTAGGTC CCATCAGCCA GAAGATGTAC 2160
GCGGTCCTGC CCTGCGGTGG CATCGGGGTG GACAGTGACA CCGTGTGGAA CGAGATGCAC 2220
TCATCTAGCG CCGTCCGCAT GGCCGTGGGT TGCTTGGTGG AGTTAGCCTT CAAGGTGGCC 2280
TCCGGGGAGC TCAAGAATGG CTTTGCTGTC ATCCGGCCAC CGGGACACCA TGCGGAGGAA 2340
TCCACCGCCA TGGGCTTCTG CTTCTTCAAC TCCGTCGCCA TCACGGCCAG ACTCCTCCAG 2400
CAGAAGCTCA GCATTGGCAA GATCCTCATT GTGGACTGGG ACATTCACCA TGGGAACGGC 2460
ACCCAACAGG CCTTCTACAC CGATCCCAGC GTGCTGTACA TCTCTCTGCA CCGCTACGAC 2520
AACGGCAACT TCTTCCCGGG CAGCGGGGCC CCCGAGGAGG TTGGCAGCGG GATAGGGGTG 2580
GGCTACAACG TCAACATAGC CTGGACGGGT GGAGTGGAGC CCCCCGTCGG AGACGTGGAG 2640
TACCTGGCCG CGTTCAGGAC GGTGGTGATG CCAATAGCCA ACGAGTTCTC CCCGGACGTG 2700
GTTCTGGTCT CTGCCGGCTT CGATGCAGTG GAGGGACACC TGTCTCCCCT GGGCGGCTAC 2760
TCCGTCACAG CAAAATGTTT TGGACACCTG ACCAAGCAGC TGATGAAACT GGCCGGCGGA 2820
CGTGTGGTGC TGGCTTTGGA GGGCGGTCAC GACCTGACAG CTATCTGCGA CGCCTCAGAA 2880
GCCTGTGTCT CTGCCCTGCT TGGTGTGGAG CTGGACCCCC TGGATCAAGC TCTCCTGCAG 2940
CAAAAGCCAA ATGTAAATGC GGTGACCACG CTGGAGAAGG TCATTGAAAT CCAGAGCAAA 3000
CACTGGAGTT CTGTGAAGCG TTGCGCCTCG GTGGTCAGCT GCTCCTTGCG GGAGGCGCAG 3060
GAGGGCGAGG CGGTGGAGGC AGAGACAGTG AGCGCCATGG CATTGCTCTC GGTCGATACT 3120
GAACAAGGAA GCACGGACTG CAGCCCCAGG TACGGCTCCT CTTCTCGTGT CACCCGGGGC 3180
ATATCGACCC TCACGCCTGC ATTAGCCTCC TCCTGTGTAT CCCCGCAGGA CGTGTCCGTG 3240
GGCTGCCCTC AGCTGGCTCA CTAG 3265
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Anc-0037 ENSACAP00000004435.3 Anolis carolinensis 87 0.0 907
WERAM-Ptv-0156 ENSPVAP00000012934.1 Pteropus vampyrus 86 0.0 872
WERAM-Caf-0149 ENSCAFP00000021172.4 Canis familiaris 86 0.0 872
WERAM-Myl-0072 ENSMLUP00000005848.2 Myotis lucifugus 85 0.0 867
WERAM-Mum-0019 ENSMUSP00000102770.2 Mus musculus 84 0.0 863
WERAM-Ict-0187 ENSSTOP00000016795.1 Ictidomys tridecemlineatus 84 0.0 862
WERAM-Aim-0213 ENSAMEP00000019373.1 Ailuropoda melanoleuca 86 0.0 861
WERAM-Dan-0156 ENSDNOP00000017844.1 Dasypus novemcinctus 85 0.0 856
WERAM-Ran-0140 ENSRNOP00000052059.4 Rattus norvegicus 85 0.0 853
WERAM-Mod-0095 ENSMODP00000032765.2 Monodelphis domestica 85 0.0 852
WERAM-Hos-0075 ENSP00000468004.1 Homo sapiens 86 0.0 851
WERAM-Bot-0149 ENSBTAP00000053450.2 Bos taurus 85 0.0 851
WERAM-Fec-0025 ENSFCAP00000002029.3 Felis catus 86 0.0 850
WERAM-Dio-0163 ENSDORP00000015416.1 Dipodomys ordii 86 0.0 850
WERAM-Tut-0123 ENSTTRP00000009926.1 Tursiops truncatus 86 0.0 850
WERAM-Otg-0108 ENSOGAP00000009396.2 Otolemur garnettii 86 0.0 850
WERAM-Mam-0051 ENSMMUP00000008945.2 Macaca mulatta 86 0.0 849
WERAM-Chs-0039 ENSCSAP00000014557.1 Chlorocebus sabaeus 86 0.0 849
WERAM-Poa-0072 ENSPPYP00000009379.1 Pongo abelii 86 0.0 849
WERAM-Ova-0067 ENSOARP00000007394.1 Ovis aries 85 0.0 848
WERAM-Sus-0129 ENSSSCP00000018401.2 Sus scrofa 85 0.0 848
WERAM-Paa-0157 ENSPANP00000020771.1 Papio anubis 86 0.0 847
WERAM-Prc-0092 ENSPCAP00000008303.1 Procavia capensis 86 0.0 847
WERAM-Caj-0108 ENSCJAP00000018977.1 Callithrix jacchus 85 0.0 847
WERAM-Mup-0103 ENSMPUP00000009452.1 Mustela putorius furo 88 0.0 847
WERAM-Ocp-0087 ENSOPRP00000007869.2 Ochotona princeps 86 0.0 845
WERAM-Orc-0081 ENSOCUP00000007421.3 Oryctolagus cuniculus 86 0.0 844
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 82 0.0 842
WERAM-Eqc-0174 ENSECAP00000019543.1 Equus caballus 86 0.0 841
WERAM-Loa-0216 ENSLAFP00000022496.1 Loxodonta africana 83 0.0 837
WERAM-Cap-0214 ENSCPOP00000014276.1 Cavia porcellus 82 0.0 821
WERAM-Nol-0057 ENSNLEP00000006711.1 Nomascus leucogenys 83 0.0 813
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 81 0.0 813
WERAM-Mim-0022 ENSMICP00000002393.1 Microcebus murinus 84 0.0 808
WERAM-Lac-0155 ENSLACP00000018356.1 Latimeria chalumnae 80 0.0 777
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 76 0.0 749
WERAM-Gaga-0107 ENSGALP00000017619.4 Gallus gallus 68 0.0 743
WERAM-Orn-0072 ENSONIP00000007998.1 Oreochromis niloticus 76 0.0 742
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 69 0.0 741
WERAM-Xet-0027 ENSXETP00000007313.3 Xenopus tropicalis 74 0.0 738
WERAM-Tag-0050 ENSTGUP00000003338.1 Taeniopygia guttata 72 0.0 734
WERAM-Anp-0035 ENSAPLP00000004005.1 Anas platyrhynchos 72 0.0 733
WERAM-Meg-0023 ENSMGAP00000001752.2 Meleagris gallopavo 73 0.0 732
WERAM-Xim-0214 ENSXMAP00000017502.1 Xiphophorus maculatus 74 0.0 730
WERAM-Ten-0172 ENSTNIP00000017010.1 Tetraodon nigroviridis 75 0.0 729
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 72 0.0 728
WERAM-Pof-0205 ENSPFOP00000017061.2 Poecilia formosa 75 0.0 725
WERAM-Pat-0104 ENSPTRP00000022412.3 Pan troglodytes 70 0.0 721
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 68 0.0 718
WERAM-Tar-0138 ENSTRUP00000030067.1 Takifugu rubripes 76 0.0 717
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 72 0.0 715
WERAM-Gog-0157 ENSGGOP00000013985.2 Gorilla gorilla 69 0.0 707
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 68 0.0 707
WERAM-Asm-0202 ENSAMXP00000018862.1 Astyanax mexicanus 73 0.0 699
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 73 0.0 688
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 68 0.0 672
WERAM-Sah-0166 ENSSHAP00000017733.1 Sarcophilus harrisii 87 0.0 667
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 63 0.0 646
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 65 9e-178 622
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 75 3e-170 597
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 63 2e-154 544
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 54 2e-152 537
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 53 8e-138 489
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 62 2e-134 478
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 50 3e-129 460
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 50 2e-116 417
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 54 7e-87 320
WERAM-Sem-0022 EFJ08599 Selaginella moellendorffii 41 2e-81 301
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 42 3e-77 288
Created Date 25-Jun-2016