WERAM Information

Tag Content
WERAM ID WERAM-Dio-0020
Ensembl Protein ID ENSDORP00000002354.1
Gene Name Hdac9
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSDORG00000002506.1 ENSDORT00000002508.1 ENSDORP00000002354.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 1.50e-100 336.2 47 969
HDAC Class-I 1.10e-19 70.7 815 938
Organism Dipodomys ordii
Domain Profile
  HDAC Class-II
           class-2.txt 31 qailsrlqeagllekleelkarkatkeelqlvHseehvelle 72
                          q+ l  +q+++ ++k + +++ ++++e+l+  H++++ e+++
  ENSDORP00000002354.1 47 QQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIK 88
                          333334455555555555555555556666666555555544 PP
           class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletaeklekeeles...... 84 
                           +g+ yd+ mlkhq++++++++hpE+++Riq+i+srlqe+gll+k+e                                           
  ENSDORP00000002354.1 631 TGIAYDPLMLKHQCICGSSTTHPEHAGRIQSIWSRLQETGLLNKCEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXxxxxed 719
                           789********************************************999887777766666333333333332221111111344555 PP
           class-2.txt  85 ............ltvdsdsiylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk 161
                                       l+vdsd+i++e +s+ aar+avG+v+el++kv   elkngfa v+PPGHHae+++                      
  ENSDORP00000002354.1 720 sqkyfsslpcggLGVDSDTIWNELHSSGAARMAVGCVIELASKVT-SELKNGFA-VKPPGHHAESAAXXXXXXXXXXXXXXXXX-XXXX 805
                           667788999999*******************************96.688****8.7********99988877666665555544.4455 PP
           class-2.txt 162 vkkilivDwDvHhGnGtqeifykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawnggl...mgdaeylaafrevvlp 247
                                    DvHhGnGtq++fy dp++ly+SlHRyd+g+ffp  gsga++evg+g geg+n+Nvaw+ggl   mgd eyl afr+vv+p
  ENSDORP00000002354.1 806 XXXXXXXXXDVHHGNGTQQAFYADPSILYISLHRYDEGNFFP--GSGAPNEVGTGLGEGYNINVAWTGGLdppMGDVEYLEAFRTVVMP 892
                           57778899**********************************..********************************************* PP
           class-2.txt 248 iakeFkPdlvlvsaGfDaaeg..dplgglsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
                           +akeF+Pd+vlvsaGfDa eg  +plgg++vtakc+++ltkql++la+grv l+lEGG++l+ai++a+ea+v+aLlg
  ENSDORP00000002354.1 893 VAKEFDPDVVLVSAGFDALEGhtSPLGGYKVTAKCFGHLTKQLMTLADGRVALALEGGHDLTAICDASEACVNALLG 969
                           *********************999***************************************************96 PP
  HDAC Class-I
           class-1.txt 168 dlhhGDgveeafyttdrvmtvsfhkyge.effPgtGdlsdvgaekgkyyavnvPlkdgid....DesyekifksviskvieafePeavv 251
                           d+hhG+g ++afy+   ++ +s+h+y+e +ffPg+G  ++vg++ g  y +nv  + g+d    D +y + f++v+ +v + f+P++v+
  ENSDORP00000002354.1 815 DVHHGNGTQQAFYADPSILYISLHRYDEgNFFPGSGAPNEVGTGLGEGYNINVAWTGGLDppmgDVEYLEAFRTVVMPVAKEFDPDVVL 903
                           9*************************8746***********************998887655559************************ PP
           class-1.txt 252 lqcGaDslag..Drlgefnlsikghaecvkfvksf 284
                           +  G D+l g   +lg ++++ k +++  k + + 
  ENSDORP00000002354.1 904 VSAGFDALEGhtSPLGGYKVTAKCFGHLTKQLMTL 938
                           ********872258*********999977765544 PP
Protein Sequence
(Fasta)		MHSRISSLDV KSEVPVGLEP ISPLDLRTDL RMMMPVVDPV VREKQLQQEL LLIQQQQQIQ 60
KQLLIAEFQK QHENLTRQHQ AQLQEHIKXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 120
XXXXXXXXXX XXXXXXAVAS TEVKQKLQEF LLSKSATKDT PTNGKNHSVS RHPKLWYTAA 180
HHTSLDQSSP PLSGTSPSYK YTLPGAQDAK DDFPLRKTAS EPNLKVRSRL KQKVAERRSS 240
PLLRRKDGNV TSFKKRMFEV TESSVSSSSP GSGPSSPNNG PTGNVTENET SVLPPTPHAE 300
QLVSQQRILI HEDSMNLLSL YTSPSLPNIT LGLPAVPSPL SASNSLKEKQ KCETQTLRQG 360
VPLPGQYGGS IPASSSHAHV ALEGKPNSSH QALLQHLLLK EQMRQQKLLV TGGVPLHPQS 420
PLATKERISP GIRGSHKLPR HRPLNRTQSA PLPQSTLAQL VIQQQHQQFL EKQKQYQQQI 480
HMNKLLSKSI EQLKQPGSHL EEAEEELQVD QAMQEDRAPS SDTSTKSDSS TCVDDTLGQV 540
GAVKVKEEPV DSDEDTQIQE MESGEQAAFM QQPFPEAPHT RALSGRPAQL AVVGMDGLEK 600
HRLLSRTQSS PAASMLPLPA VDHPLQPGSA TGIAYDPLML KHQCICGSST THPEHAGRIQ 660
SIWSRLQETG LLNKCEXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXEDS 720
QKYFSSLPCG GLGVDSDTIW NELHSSGAAR MAVGCVIELA SKVTSELKNG FAVKPPGHHA 780
ESAAXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXDVHHGN GTQQAFYADP SILYISLHRY 840
DEGNFFPGSG APNEVGTGLG EGYNINVAWT GGLDPPMGDV EYLEAFRTVV MPVAKEFDPD 900
VVLVSAGFDA LEGHTSPLGG YKVTAKCFGH LTKQLMTLAD GRVALALEGG HDLTAICDAS 960
EACVNALLGN ELEPLAEDTL HQSPNMNAVA SLQKIIEIQS KYWKSVRMVA VPRGCALPGT 1020
QLQEETETVS ALASLTVDVE QPFAQEDSRA ACEPMEEEPA S 1061
Nucleotide Sequence
(Fasta)		ATGCACAGTA GGATCAGCTC ATTGGATGTG AAGTCAGAGG TCCCTGTGGG CCTGGAGCCC 60
ATCTCACCTT TAGACCTAAG GACGGACCTC AGGATGATGA TGCCAGTGGT GGACCCTGTT 120
GTCCGGGAGA AACAACTGCA GCAGGAATTA CTTCTTATTC AGCAACAGCA GCAAATCCAG 180
AAGCAGCTTC TGATCGCAGA GTTCCAGAAA CAGCATGAGA ACTTGACACG ACAGCATCAG 240
GCTCAGCTTC AGGAGCACAT AAAGNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 300
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 360
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNGAGC TGTGGCAAGC 420
ACAGAAGTAA AGCAGAAGCT TCAAGAATTC CTGTTGAGTA AATCAGCAAC AAAAGACACT 480
CCAACTAATG GAAAAAATCA TTCCGTGAGC CGCCATCCCA AGCTCTGGTA CACGGCTGCC 540
CACCACACAT CTTTGGATCA AAGCTCACCA CCCCTTAGTG GGACCTCTCC ATCCTACAAA 600
TACACCTTGC CAGGAGCACA AGATGCCAAG GATGATTTCC CACTCCGAAA AACTGCCTCT 660
GAGCCCAACT TGAAGGTGCG GTCCAGGTTA AAACAGAAAG TGGCAGAGAG GAGAAGCAGT 720
CCCTTACTCA GGCGGAAGGA TGGAAATGTC ACTTCATTCA AGAAGCGAAT GTTTGAGGTG 780
ACAGAATCCT CAGTCAGTAG CAGTTCTCCT GGGTCTGGTC CCAGTTCACC AAACAATGGG 840
CCAACTGGAA ATGTTACTGA AAATGAAACT TCAGTTTTGC CCCCTACTCC TCATGCTGAG 900
CAACTGGTTT CACAGCAGCG CATCTTAATC CACGAAGATT CCATGAACCT GCTAAGTCTC 960
TATACCTCTC CTTCTTTGCC CAACATCACC TTGGGGCTGC CGGCAGTGCC CTCGCCACTC 1020
AGTGCTTCAA ATTCACTTAA AGAAAAGCAA AAATGTGAGA CACAGACGCT CAGGCAAGGT 1080
GTTCCTCTTC CTGGCCAGTA CGGGGGCAGC ATCCCAGCCT CATCAAGCCA TGCTCATGTC 1140
GCCCTAGAGG GGAAGCCCAA CAGCAGCCAC CAAGCTCTCC TGCAGCATTT ATTACTGAAA 1200
GAACAAATGC GACAACAAAA GCTTCTTGTG ACTGGTGGCG TCCCCTTACA TCCTCAGTCT 1260
CCATTGGCGA CAAAAGAGAG AATTTCACCT GGCATTCGAG GTTCCCACAA ATTGCCCCGT 1320
CACAGACCTC TGAATAGAAC CCAGTCTGCA CCTTTGCCTC AGAGTACATT GGCTCAGCTG 1380
GTCATTCAGC AGCAACACCA GCAGTTCTTG GAGAAGCAGA AACAATACCA GCAGCAGATC 1440
CACATGAACA AACTGCTCTC GAAATCTATT GAACAACTGA AGCAACCAGG CAGTCACCTT 1500
GAGGAGGCAG AGGAAGAGCT TCAGGTCGAC CAGGCGATGC AGGAAGACAG AGCGCCCTCT 1560
AGTGACACCA GCACTAAGAG CGACAGCAGT ACTTGTGTGG ATGATACACT GGGACAAGTT 1620
GGGGCAGTGA AAGTCAAGGA GGAACCCGTG GACAGTGATG AAGATACTCA GATCCAGGAA 1680
ATGGAATCTG GGGAGCAGGC TGCTTTTATG CAACAGCCCT TCCCGGAGGC CCCGCACACA 1740
CGTGCGCTCT CAGGGCGCCC GGCTCAGCTG GCTGTGGTTG GCATGGATGG ATTAGAGAAG 1800
CATCGGCTCC TCTCCAGGAC TCAGTCTTCC CCTGCTGCCT CCATGTTACC TCTCCCTGCA 1860
GTGGACCACC CCCTCCAGCC TGGCTCAGCA ACTGGAATTG CCTATGATCC CCTGATGCTG 1920
AAGCACCAGT GCATTTGTGG CAGTTCCACC ACCCACCCAG AGCACGCTGG AAGAATACAG 1980
AGCATCTGGT CACGGCTACA AGAAACTGGG CTGCTAAATA AATGTGAGNN NNNNNNNNNN 2040
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2100
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNG TGAAGATTCT 2160
CAAAAGTATT TTTCCTCATT ACCTTGTGGT GGACTGGGGG TGGACAGTGA CACCATTTGG 2220
AATGAGCTGC ACTCGTCCGG TGCTGCACGC ATGGCTGTTG GCTGTGTCAT CGAGCTGGCT 2280
TCCAAAGTGA CCTCAGAGCT GAAGAATGGG TTTGCTGTTA AGCCCCCAGG CCATCATGCT 2340
GAATCTGCAG CCATNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 2400
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNGATGTGCA CCATGGAAAC 2460
GGTACACAGC AGGCCTTTTA TGCTGACCCC AGCATCCTGT ACATTTCACT CCATCGCTAT 2520
GATGAAGGGA ACTTTTTCCC TGGCAGTGGA GCCCCAAATG AGGTTGGAAC AGGCCTTGGA 2580
GAAGGGTATA ATATAAATGT TGCCTGGACA GGTGGCCTTG ATCCTCCCAT GGGAGATGTG 2640
GAGTACCTTG AAGCATTCAG GACTGTCGTA ATGCCTGTGG CCAAAGAGTT TGATCCAGAT 2700
GTGGTCCTGG TTTCCGCTGG ATTTGATGCA TTGGAAGGCC ATACCTCTCC ACTGGGGGGG 2760
TACAAAGTGA CTGCAAAATG CTTTGGTCAC TTGACGAAGC AATTGATGAC ATTGGCGGAT 2820
GGGCGTGTGG CGCTGGCTCT GGAAGGAGGA CACGACCTCA CAGCCATCTG TGATGCATCA 2880
GAAGCCTGCG TAAATGCCCT TCTAGGAAAT GAGCTAGAGC CGCTTGCTGA GGACACTCTC 2940
CATCAATCCC CAAACATGAA TGCTGTCGCT TCTTTACAGA AGATCATTGA AATTCAAAGC 3000
AAGTACTGGA AGTCAGTAAG GATGGTGGCT GTGCCAAGGG GCTGTGCTCT GCCTGGTACT 3060
CAGTTGCAAG AGGAGACAGA GACCGTTTCT GCTCTGGCCT CCCTCACGGT GGATGTGGAA 3120
CAACCCTTTG CTCAGGAAGA CAGCAGAGCT GCTTGTGAGC CCATGGAAGA GGAGCCGGCC 3180
TCATGA 3187
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Mam-0095 ENSMMUP00000014626.2 Macaca mulatta 84 0.0 1526
WERAM-Nol-0183 ENSNLEP00000020216.1 Nomascus leucogenys 84 0.0 1522
WERAM-Pat-0158 ENSPTRP00000032389.5 Pan troglodytes 84 0.0 1519
WERAM-Caf-0031 ENSCAFP00000003650.3 Canis familiaris 84 0.0 1519
WERAM-Mup-0161 ENSMPUP00000013847.1 Mustela putorius furo 83 0.0 1512
WERAM-Aim-0096 ENSAMEP00000008994.1 Ailuropoda melanoleuca 83 0.0 1509
WERAM-Eqc-0153 ENSECAP00000016533.1 Equus caballus 83 0.0 1504
WERAM-Caj-0009 ENSCJAP00000001947.2 Callithrix jacchus 83 0.0 1497
WERAM-Poa-0162 ENSPPYP00000019901.2 Pongo abelii 83 0.0 1491
WERAM-Orc-0142 ENSOCUP00000012429.3 Oryctolagus cuniculus 81 0.0 1479
WERAM-Tut-0166 ENSTTRP00000014151.1 Tursiops truncatus 84 0.0 1465
WERAM-Loa-0142 ENSLAFP00000012719.4 Loxodonta africana 82 0.0 1462
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 81 0.0 1453
WERAM-Hos-0016 ENSP00000410337.2 Homo sapiens 83 0.0 1414
WERAM-Ocp-0153 ENSOPRP00000015747.2 Ochotona princeps 75 0.0 1354
WERAM-Pes-0105 ENSPSIP00000013270.1 Pelodiscus sinensis 74 0.0 1322
WERAM-Gaga-0107 ENSGALP00000017619.4 Gallus gallus 73 0.0 1307
WERAM-Soa-0055 ENSSARP00000005400.1 Sorex araneus 82 0.0 1277
WERAM-Fia-0119 ENSFALP00000010264.1 Ficedula albicollis 72 0.0 1276
WERAM-Anp-0079 ENSAPLP00000009519.1 Anas platyrhynchos 72 0.0 1264
WERAM-Cap-0062 ENSCPOP00000004924.2 Cavia porcellus 78 0.0 1246
WERAM-Mod-0016 ENSMODP00000001749.3 Monodelphis domestica 72 0.0 1239
WERAM-Ran-0028 ENSRNOP00000071341.1 Rattus norvegicus 79 0.0 1217
WERAM-Ere-0042 ENSEEUP00000003697.1 Erinaceus europaeus 79 0.0 1217
WERAM-Ict-0021 ENSSTOP00000001380.2 Ictidomys tridecemlineatus 82 0.0 1188
WERAM-Paa-0166 ENSPANP00000002081.1 Papio anubis 81 0.0 1174
WERAM-Gog-0153 ENSGGOP00000013334.2 Gorilla gorilla 81 0.0 1169
WERAM-Bot-0044 ENSBTAP00000004971.5 Bos taurus 80 0.0 1162
WERAM-Ova-0102 ENSOARP00000010345.1 Ovis aries 80 0.0 1156
WERAM-Prc-0004 ENSPCAP00000000473.1 Procavia capensis 74 0.0 1109
WERAM-Myl-0074 ENSMLUP00000006040.2 Myotis lucifugus 75 0.0 1048
WERAM-Leo-0108 ENSLOCP00000014009.1 Lepisosteus oculatus 61 0.0 1027
WERAM-Meg-0105 ENSMGAP00000010668.1 Meleagris gallopavo 65 0.0 915
WERAM-Tub-0129 ENSTBEP00000014362.1 Tupaia belangeri 69 0.0 813
WERAM-Tag-0040 ENSTGUP00000002713.1 Taeniopygia guttata 62 0.0 798
WERAM-Lac-0155 ENSLACP00000018356.1 Latimeria chalumnae 50 0.0 790
WERAM-Dar-0170 ENSDARP00000100072.2 Danio rerio 50 0.0 768
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 48 0.0 755
WERAM-Mum-0019 ENSMUSP00000102770.2 Mus musculus 52 0.0 749
WERAM-Chs-0068 ENSCSAP00000002314.1 Chlorocebus sabaeus 49 0.0 746
WERAM-Mae-0145 ENSMEUP00000015025.1 Macropus eugenii 57 0.0 744
WERAM-Dan-0037 ENSDNOP00000003826.3 Dasypus novemcinctus 49 0.0 741
WERAM-Fec-0140 ENSFCAP00000013207.3 Felis catus 49 0.0 741
WERAM-Sus-0169 ENSSSCP00000025173.1 Sus scrofa 49 0.0 741
WERAM-Xet-0035 ENSXETP00000010592.2 Xenopus tropicalis 47 0.0 734
WERAM-Mim-0009 ENSMICP00000000769.1 Microcebus murinus 72 0.0 729
WERAM-Anc-0099 ENSACAP00000009498.3 Anolis carolinensis 50 0.0 727
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 46 0.0 694
WERAM-Xim-0214 ENSXMAP00000017502.1 Xiphophorus maculatus 46 0.0 694
WERAM-Otg-0061 ENSOGAP00000004404.2 Otolemur garnettii 46 0.0 684
WERAM-Orn-0049 ENSONIP00000005635.1 Oreochromis niloticus 44 0.0 672
WERAM-Asm-0146 ENSAMXP00000013789.1 Astyanax mexicanus 46 0.0 658
WERAM-Pem-0041 ENSPMAP00000005402.1 Petromyzon marinus 47 0.0 653
WERAM-Ptv-0048 ENSPVAP00000005230.1 Pteropus vampyrus 87 9e-180 628
WERAM-Chh-0086 ENSCHOP00000009630.1 Choloepus hoffmanni 86 3e-176 616
WERAM-Ect-0082 ENSETEP00000009275.1 Echinops telfairi 59 3e-170 597
WERAM-Vip-0084 ENSVPAP00000007862.1 Vicugna pacos 83 6e-168 589
WERAM-Tar-0063 ENSTRUP00000012899.1 Takifugu rubripes 54 3e-144 510
WERAM-Pof-0029 ENSPFOP00000001978.1 Poecilia formosa 53 1e-143 508
WERAM-Orla-0199 ENSORLP00000022663.1 Oryzias latipes 58 8e-143 505
WERAM-Ten-0103 ENSTNIP00000011743.1 Tetraodon nigroviridis 53 8e-143 505
WERAM-Gam-0063 ENSGMOP00000006368.1 Gadus morhua 65 2e-142 504
WERAM-Sah-0025 ENSSHAP00000002837.1 Sarcophilus harrisii 54 8e-135 479
WERAM-Drm-0080 FBpp0290513 Drosophila melanogaster 46 2e-114 411
WERAM-Cii-0046 ENSCINP00000016829.3 Ciona intestinalis 34 1e-108 392
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 42 1e-82 305
WERAM-Cis-0060 ENSCSAVP00000013851.1 Ciona savignyi 46 6e-71 266
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 33 1e-52 206
Created Date 25-Jun-2016