Arabidopsis thaliana      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 28 genes.  Reviewed (27 or Unreviewed (1

No.StatusWERAM IDGene/Alias Name
1
WERAM-Art-0005
At1g05910; BRD8; T20M3.19
2
WERAM-Art-0006
GTE4; At1g06230; F9P14.9
3
WERAM-Art-0014
GTE5; At1g17790; F2H15.2
4
WERAM-Art-0015
At1g20670; BRD1
5
WERAM-Art-0017
TAF1; GTD1; HAC13; HAF1; TAF1A; At1g32750; F6N18.13
6
WERAM-Art-0021
At1g58025; BRD5
7
WERAM-Art-0022
BRD4; At1g61215
8
WERAM-Art-0028
GTE3; At1g73150; F3N23.35; T18K17.19
9
WERAM-Art-0029
At1g76380; BRD2
10
WERAM-Art-0052
GTE1; IMB1; At2g34900; F19I3.13
11
WERAM-Art-0056
At2g42150; BRD9
12
WERAM-Art-0058
At2g44430; BRD3
13
WERAM-Art-0059
"BRM,CHR2; At2g46020; F4I18; T3F17.33"
14
WERAM-Art-0062
GTE11; BET10; At3g01770; F28J7.10; F4P13.32
15
WERAM-Art-0073
TAF1B; HAF2; At3g19040; K13E13.15; K13E13_16
16
WERAM-Art-0078
GTE8; At3g27260; K17E12.8
17
WERAM-Art-0088
GTE6; At3g52280; T25B15.50
18
WERAM-Art-0090
HAG1; BGT; GCN5; HAT1BGT; At3g54610; T14E10.180
19
WERAM-Art-0091
T10K17.190; BRD7; At3g57980
20
WERAM-Art-0093
At3g60110; BRD6
21
WERAM-Art-0121
GTE2; At5g10550; F12B17_100
22
WERAM-Art-0124
GTE9; BET9; At5g14270; F18O22.60
23
WERAM-Art-0138
GTE12; At5g46550; F10E10.2
24
WERAM-Art-0139
At5g49430; BRD11
25
WERAM-Art-0142
At5g55040; BRD13
26
WERAM-Art-0149
GTE10; NPX1; At5g63320/At5g63330; K9H21.2/K9H21.3
27
WERAM-Art-0152
GTE7; At5g65630; K21L13.15
28
WERAM-Art-0060