WERAM Information

Tag Content
WERAM ID WERAM-Art-0121
Ensembl Protein ID AT5G10550.1
Uniprot Accession Q9LXA7; GTE2_ARATH; F4KI72; Q8GXZ1
Genbank Protein ID NP_196617.1
Protein Name Transcription factor GTE2
Genbank Nucleotide ID NM_121093.1
Gene Name GTE2;At5g10550;F12B17_100
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT5G10550 AT5G10550.1 AT5G10550.1
Details
Type Family Domain Substrates AA References (PMIDs)
Ac_Reader Bromodomain Bromodomain K 12466527
Status Reviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.70e-24 85 262 333
Organism Arabidopsis thaliana
NCBI Taxa ID 3702
Functional Description
(View)
Domain Profile
  Ac_Reader Bromodomain
    BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssvq 72 
                  +h+ s++F +pvd   l ++dY+ i+++PmdL t+k +le+g Y+sp +f+ Dvrl f+Na+ yn+++++v+
  AT5G10550.1 262 KHKWSWVFLNPVDVVgLGLHDYHRIVDKPMDLGTVKMNLEKGLYRSPIDFASDVRLTFTNAMSYNPKGQDVY 333
                  89******************************************************************9997 PP
Protein Sequence
(Fasta)		MDRATSLNRS EPSDLESTVR RSTKRFNGQI SMSFKKRRCL TLFFLVLLSK QQSLSFLPIA 60
GIVFPVALIS HFNFCMAPAV LANLNEPLFL GQCGAVFMRK YTNQPLSGDI NNPLFNPNPN 120
PNSISAYGNN SSKHFDDSSA YGDYVSFDLD GYTSNQLREL KKRLNSELEE VRFLRERIES 180
GTFVSGSVYT TQARSFAGET NDVGVKKTKT KKKKIGHGQK RSNPFATDEP SLKRHVALDL 240
MSEKVLKSMM TTCGQILVKL MKHKWSWVFL NPVDVVGLGL HDYHRIVDKP MDLGTVKMNL 300
EKGLYRSPID FASDVRLTFT NAMSYNPKGQ DVYLMAEKLL SQFDVWFNPT LKRFEAQEVK 360
VMGSSSRPGP EDNQRVWNQN NVAENARKGP EQISIAKKLD SVKPLLPTLP PPPVIEITRD 420
PSPPPSPVQP PPPPSPPPQP VNQVEASLEV RETNKGRKGK LPKPKAKDPN KREMTMDEKG 480
KLGVNLQELP PEKLGQLIQI LRKRTRDLPQ DGDEIELDIE ALDNETLWEL DRFVTNYRKM 540
ASKIKRQGFI QNVSTPPRNM PPVTEMGSAE KRGRKGGEAG EEDVDIGEDI PVEDYPSVEI 600
ERDGTAAAAS GGSSSSGSFS SSGSSSSSDS ESGSSSGSDS DADSVQSPFV EAKEAPWNLC 660
VNGRERKEGK LERKDFEC 678
Nucleotide Sequence
(Fasta)		ATGGATCGGG CAACGTCATT AAACAGATCT GAACCGTCAG ATCTCGAATC AACGGTGAGG 60
AGAAGCACTA AGCGTTTTAA CGGGCAGATT TCAATGTCCT TTAAGAAGAG ACGATGCCTC 120
ACCTTGTTTT TCCTCGTCCT CCTCTCCAAA CAACAATCCC TTTCTTTTCT TCCGATCGCC 180
GGAATTGTTT TTCCGGTGGC GTTAATTTCT CACTTCAACT TTTGTATGGC ACCTGCGGTT 240
TTGGCTAACC TAAACGAACC GTTGTTTCTG GGACAATGTG GCGCCGTTTT TATGAGGAAA 300
TACACAAACC AACCTCTTTC CGGTGATATC AATAATCCTC TTTTCAACCC TAACCCTAAC 360
CCTAACTCAA TCTCCGCTTA CGGGAACAAT TCGAGCAAGC ATTTCGATGA TTCGTCAGCT 420
TATGGAGACT ACGTTTCCTT TGATCTTGAT GGGTACACCT CGAATCAGCT CAGGGAGCTG 480
AAGAAGCGTC TCAATTCGGA GCTCGAGGAA GTTCGGTTCC TGAGAGAACG GATCGAATCG 540
GGTACGTTCG TGAGCGGCTC TGTTTATACT ACTCAAGCTC GTAGCTTCGC TGGTGAAACG 600
AATGACGTTG GAGTGAAGAA GACGAAGACG AAGAAGAAGA AAATTGGGCA TGGGCAGAAG 660
CGAAGCAATC CGTTTGCTAC GGACGAGCCT AGCCTTAAGC GTCATGTGGC TTTGGATCTG 720
ATGTCTGAGA AGGTGTTGAA GAGTATGATG ACGACATGTG GTCAGATCTT GGTGAAGCTG 780
ATGAAGCATA AATGGTCATG GGTCTTTTTA AATCCTGTTG ATGTGGTAGG TTTAGGGCTT 840
CATGACTATC ATCGGATTGT GGACAAGCCT ATGGATCTGG GTACGGTGAA GATGAATCTG 900
GAAAAAGGTT TATATAGATC GCCGATTGAT TTCGCTTCTG ATGTTAGGTT GACTTTCACC 960
AATGCGATGT CGTATAATCC AAAGGGTCAA GATGTTTATT TGATGGCTGA GAAGCTTCTG 1020
AGTCAATTTG ACGTTTGGTT CAACCCTACA TTGAAGAGAT TCGAGGCTCA AGAGGTGAAA 1080
GTTATGGGAT CATCGTCTCG TCCTGGACCT GAGGATAATC AAAGAGTGTG GAATCAGAAT 1140
AATGTGGCGG AGAATGCAAG GAAAGGACCT GAACAGATTT CTATAGCTAA AAAGCTAGAT 1200
TCAGTGAAGC CGCTACTACC TACATTGCCT CCTCCTCCAG TAATTGAGAT AACACGTGAC 1260
CCATCTCCTC CTCCTTCACC GGTTCAGCCA CCACCACCAC CATCACCACC TCCCCAGCCG 1320
GTTAACCAAG TGGAAGCATC ACTTGAAGTG CGTGAAACGA ATAAGGGAAG GAAAGGGAAG 1380
TTACCGAAAC CGAAGGCTAA GGATCCAAAC AAGCGGGAAA TGACAATGGA TGAAAAGGGA 1440
AAGCTTGGCG TGAATCTACA AGAATTGCCT CCTGAGAAGC TTGGACAGTT GATTCAGATT 1500
CTTAGGAAGA GGACAAGAGA TTTGCCTCAA GACGGTGACG AAATAGAGTT GGATATTGAA 1560
GCTTTAGATA ATGAGACTTT GTGGGAGCTT GATCGTTTTG TTACCAACTA CAGAAAGATG 1620
GCAAGCAAGA TCAAGCGACA AGGGTTTATC CAGAATGTGT CAACTCCACC AAGAAACATG 1680
CCTCCGGTGA CAGAAATGGG AAGTGCTGAG AAGAGAGGGA GGAAAGGAGG GGAAGCAGGA 1740
GAAGAGGATG TAGACATTGG AGAAGATATA CCAGTTGAGG ATTATCCATC AGTGGAGATT 1800
GAAAGGGATG GTACAGCTGC CGCTGCTAGT GGTGGCTCTA GTTCTTCTGG CAGCTTCAGT 1860
TCGAGTGGCA GTTCTTCTTC TAGTGATTCA GAGTCAGGGA GTTCATCAGG AAGTGATTCG 1920
GATGCGGATA GTGTGCAGTC TCCATTTGTG GAAGCAAAAG AAGCCCCGTG GAACCTTTGT 1980
GTAAATGGAA GGGAAAGGAA GGAAGGGAAA CTCGAAAGAA AAGATTTTGA GTGTTAG 2038
Sequence Source Ensembl
Keyword

KW-0103--Bromodomain
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation
--
Interpro

IPR001487--Bromodomain
IPR027353--NET_dom
PROSITE

PS50014--BROMODOMAIN_2
PS51525--NET
Pfam

PF17035--BET
PF00439--Bromodomain
Gene Ontology

GO:0005634--C:nucleus
GO:0006355--P:regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0151 scaffold_803299.1 Arabidopsis lyrata 65 3e-173 606
WERAM-Brr-0122 Bra024402.1-P Brassica rapa 63 2e-162 570
WERAM-Viv-0014 VIT_03s0097g00570.t01 Vitis vinifera 43 1e-83 308
WERAM-Sot-0009 PGSC0003DMT400008039 Solanum tuberosum 42 1e-71 268
WERAM-Sol-0021 Solyc01g106280.2.1 Solanum lycopersicum 40 4e-66 250
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 38 4e-60 230
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 39 2e-52 204
WERAM-Glm-0189 GLYMA15G06570.1 Glycine max 40 1e-46 186
WERAM-Mua-0050 GSMUA_Achr3P00480_001 Musa acuminata 44 3e-45 181
WERAM-Amt-0058 ERN18099 Amborella trichopoda 37 9e-44 176
WERAM-Pot-0106 POPTR_0009s08350.1 Populus trichocarpa 39 4e-43 173
WERAM-Thc-0024 EOX98601 Theobroma cacao 43 1e-42 172
WERAM-Met-0109 AES90543 Medicago truncatula 40 5e-40 163
WERAM-Prp-0054 EMJ01899 Prunus persica 42 8e-40 162
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 42 3e-36 150
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 43 5e-36 150
WERAM-Sei-0009 Si001167m Setaria italica 43 6e-36 150
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 44 8e-36 149
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 62 5e-35 147
WERAM-Zem-0093 GRMZM2G167718_P01 Zea mays 63 1e-34 145
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 63 2e-34 145
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 54 2e-34 145
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 54 4e-34 144
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 53 8e-34 142
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 54 1e-33 142
WERAM-Sob-0043 Sb03g001920.1 Sorghum bicolor 62 1e-33 142
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 54 1e-33 142
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 62 2e-33 142
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 48 3e-33 141
WERAM-Bro-0001 Bo00831s130.1 Brassica oleracea 41 9e-31 132
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 49 1e-30 132
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 49 2e-30 131
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 49 3e-30 130
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 55 7e-30 129
WERAM-Aet-0072 EMT26738 Aegilops tauschii 55 1e-29 129
Created Date 25-Jun-2016