WERAM Information

Tag Content
WERAM ID WERAM-Sob-0043
Ensembl Protein ID Sb03g001920.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb03g001920 Sb03g001920.1 Sb03g001920.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 1.60e-25 89.8 150 220
Organism Sorghum bicolor
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                    +h++s++F++pvd+  l ++dY++ii +PmdL t+k++l +g+Y+sp ef+ Dvrl f+Na++yn+++++v
  Sb03g001920.1 150 KHKHSWVFNKPVDASaLGLHDYHTIITKPMDLGTVKSKLGAGQYKSPREFAGDVRLTFQNAMTYNPKGQDV 220
                    89*****************************************************************9987 PP
Protein Sequence
(Fasta)		MAAGPPSPSG KPYSRKSHAS SKAPSVPSFD AHNGPLLPTV TFSLPSTTAS RRELRRRLSS 60
ELSQVRAAAK RLNSLSAPAP SSALSATDPS TPLPPHPPAS KHKSKKGGGA PHPHPHPHPH 120
PHPHLSAEAR RKLYAPVFKT CSVLLQRLMK HKHSWVFNKP VDASALGLHD YHTIITKPMD 180
LGTVKSKLGA GQYKSPREFA GDVRLTFQNA MTYNPKGQDV HFMAEQLLNM FEEKWPEIEA 240
EVAQLSPQPP TPSSAAPRKP KEIDNSRVLE RSDSTVHAAA MEATPKTHTG RPPVLKKPKA 300
REPNKRDMTF WEKQRLSNNL QDLPPEKLDN VVQIIKKRNL SLSQHDDEIE VDIDSFDVET 360
LWELDRFVTN YRKSITKNKR KAELELSAVR PDEADPDQEP EKVEHVRQDE PDQDQIPAVQ 420
EPIPEREAVD VAPPKDNAAD DNERFVGESS PGHLEDQKGE NADTDSDSSS ADGSDAAQSP 480
RT 482
Nucleotide Sequence
(Fasta)		ATGGCCGCCG GGCCGCCCTC GCCGTCCGGT AAACCCTACT CGCGCAAATC TCACGCCAGC 60
TCCAAGGCTC CCAGCGTCCC CTCTTTTGAC GCCCACAACG GCCCCCTCCT CCCCACCGTC 120
ACCTTCTCGC TGCCCTCCAC GACCGCCTCC CGCCGGGAGC TGCGCCGCCG CCTCTCCTCC 180
GAGCTCTCCC AGGTGCGCGC TGCCGCCAAG CGCCTCAACT CCCTCTCGGC TCCCGCCCCC 240
TCCTCGGCGC TCTCCGCCAC CGACCCGTCC ACGCCGCTCC CGCCGCACCC GCCGGCGTCC 300
AAGCACAAGT CCAAGAAGGG CGGGGGAGCC CCGCACCCGC ACCCGCACCC GCACCCGCAC 360
CCGCACCCGC ACCTCTCGGC GGAGGCGCGG CGCAAGCTCT ACGCGCCCGT GTTCAAGACC 420
TGCTCCGTGC TGCTCCAGAG GCTGATGAAG CACAAGCACA GCTGGGTGTT CAACAAGCCG 480
GTAGATGCGA GCGCGCTTGG CCTGCACGAC TACCATACAA TCATCACCAA GCCCATGGAC 540
CTCGGCACAG TCAAGTCAAA GCTAGGGGCC GGACAGTACA AGTCACCACG GGAATTCGCA 600
GGTGATGTGC GTCTGACATT CCAGAATGCC ATGACGTACA ACCCCAAGGG CCAGGACGTG 660
CACTTCATGG CCGAGCAGCT GCTGAACATG TTCGAGGAGA AGTGGCCGGA GATTGAGGCT 720
GAGGTAGCTC AGCTATCACC ACAGCCTCCA ACACCGTCCT CAGCGGCACC CAGGAAGCCA 780
AAGGAGATAG ATAATTCTAG GGTATTAGAG AGGTCTGATT CCACAGTTCA TGCTGCCGCG 840
ATGGAGGCTA CCCCGAAGAC TCACACCGGC AGACCCCCAG TTTTAAAGAA ACCCAAGGCA 900
AGGGAGCCCA ATAAGAGGGA TATGACATTC TGGGAGAAGC AGCGGCTTAG CAATAACCTC 960
CAGGATTTGC CACCGGAGAA GCTAGACAAT GTTGTTCAGA TCATAAAGAA GAGGAACTTG 1020
TCACTCAGCC AGCATGATGA TGAGATTGAG GTTGATATCG ATAGCTTTGA TGTTGAAACA 1080
TTATGGGAGC TTGATAGATT TGTGACAAAC TATAGGAAGA GTATAACTAA GAATAAGCGG 1140
AAGGCTGAGC TTGAGCTTTC TGCGGTAAGG CCGGATGAAG CTGATCCTGA TCAGGAGCCA 1200
GAGAAGGTAG AACATGTGAG GCAGGATGAG CCAGATCAGG ATCAAATTCC TGCAGTACAA 1260
GAGCCGATTC CAGAACGAGA AGCAGTTGAT GTTGCGCCAC CTAAGGATAA TGCGGCAGAT 1320
GACAATGAGA GATTTGTGGG TGAATCATCA CCTGGTCATT TGGAAGATCA GAAGGGAGAG 1380
AATGCTGATA CGGACTCAGA TAGTTCATCA GCAGATGGTT CTGATGCTGC ACAATCACCC 1440
AGAACATAG
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0130 GRMZM2G400907_P01 Zea mays 90 0.0 687
WERAM-Sei-0009 Si001167m Setaria italica 90 0.0 653
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 76 3e-166 582
WERAM-Brd-0040 BRADI2G06910.1 Brachypodium distachyon 76 4e-162 568
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 77 1e-161 566
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 77 1e-158 556
WERAM-Lep-0003 LPERR01G06860.1 Leersia perrieri 85 3e-155 545
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 74 4e-151 531
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 76 6e-151 531
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 76 1e-150 530
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 85 8e-149 524
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 85 3e-148 522
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 85 3e-144 509
WERAM-Tra-0337 TRAES3BF020300080CFD_t1 Triticum aestivum 75 2e-141 500
WERAM-Hov-0050 MLOC_53153.2 Hordeum vulgare 74 2e-139 493
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 85 3e-135 479
WERAM-Aet-0058 EMT09500 Aegilops tauschii 80 1e-117 420
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 59 9e-98 354
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 57 2e-87 320
WERAM-Thc-0011 EOX94205 Theobroma cacao 62 4e-87 319
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 62 5e-87 318
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 63 2e-85 313
WERAM-Prp-0041 EMJ12560 Prunus persica 59 3e-85 313
WERAM-Viv-0072 VIT_12s0028g02510.t01 Vitis vinifera 61 3e-84 309
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 56 4e-84 309
WERAM-Amt-0025 ERN13953 Amborella trichopoda 62 2e-83 306
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 59 5e-83 305
WERAM-Met-0055 KEH39253 Medicago truncatula 52 2e-80 297
WERAM-Sol-0141 Solyc12g014170.1.1 Solanum lycopersicum 56 2e-80 297
WERAM-Brr-0152 Bra030643.1-P Brassica rapa 57 1e-78 291
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 56 7e-78 288
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 57 6e-75 278
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 57 7e-75 278
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 51 2e-67 254
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 42 8e-51 198
Created Date 25-Jun-2016