WERAM Information

Tag Content
WERAM ID WERAM-Sol-0141
Ensembl Protein ID Solyc12g014170.1.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc12g014170.1 Solyc12g014170.1.1 Solyc12g014170.1.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 5.50e-26 91.2 376 446
Organism Solanum lycopersicum
Domain Profile
  Ac_Reader Bromodomain
           BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                         +h++ ++F+epv+ + l ++dY+ iik+PmdL tik+rl ++ Y+sp ef++Dvrl+f+Na++yn+++++v
  Solyc12g014170.1.1 376 KHKHGWVFNEPVNVErLGLHDYHAIIKHPMDLGTIKARLSQNWYKSPREFAEDVRLVFHNAMTYNPKGHDV 446
                         799*****************************************************************998 PP
Protein Sequence
(Fasta)		MASYADDLKS RERLRWGSPI KVYTRKRRRI QKKDDSIPIS AAPDVSSNDA NGYVVQAGES 60
ESAEKSERLQ DRQEVEEPQL KACDLELEDG RDRNQDQDLV ELINGGQGQE DTLGSQGDVD 120
GRDVGKFGGS PIVEANTSGD VRGKQAARET DADGLTRDHA ELDSTVKPVI SRFRDRIRIN 180
IGGMTSRAEI KGIRRDLAGE LDQVRSLVTE LEAKQIQLTA HDTNTNGGSN NVGRIPSVPS 240
GAVNSYSQPR YIDNGVMNSR ALVRANSEMD LVGHPRSRPF QRPRVAVVEN NNVAAEFVEK 300
EKRTPKANQY YTNSEFLLAK DRLPPESNKK FKPNGAGRKH NGELEQGYPF GVGFGFDKHR 360
NQVFKRCTTL LQRLMKHKHG WVFNEPVNVE RLGLHDYHAI IKHPMDLGTI KARLSQNWYK 420
SPREFAEDVR LVFHNAMTYN PKGHDVHLMS EQLLKIFEDR WAVIEAEFNP DWRYQMYHDA 480
GLPTPASRKV PQPSPFARAS VTSHPPASQA RALERSELMT EPADFRFKPS RVAHVGRVPV 540
PKKPKANDPN KRDMTYEEKQ RLSTHLQSLP LEKLDAVVQI IKKRNSTFYQ NGDEIEVDID 600
SVDVESLWEL ERFVTNYKKN LSKQKRKTEL AQQARRTART APVMNSAPMV AGAPNSNTEA 660
GRQMDNASRS SSSSSSSSDS GSSSSDSDSD SSSGSGSEGG H 701
Nucleotide Sequence
(Fasta)		ATGGCTTCAT ATGCCGACGA TTTGAAATCT AGAGAAAGGT TAAGGTGGGG AAGCCCTATC 60
AAAGTTTATA CGCGGAAACG TAGAAGGATC CAGAAGAAGG ATGACTCGAT TCCGATTTCC 120
GCCGCGCCGG ATGTGAGCAG CAATGACGCG AATGGTTATG TTGTACAGGC TGGGGAATCG 180
GAATCTGCGG AGAAATCGGA ACGGTTGCAG GACCGTCAGG AGGTGGAAGA ACCTCAACTG 240
AAAGCGTGTG ATTTGGAATT GGAAGATGGG AGGGATAGGA ATCAGGATCA GGATCTGGTA 300
GAATTGATAA ATGGTGGACA AGGGCAGGAA GATACCCTTG GATCACAGGG AGATGTAGAT 360
GGTAGAGATG TGGGTAAGTT TGGTGGTAGC CCAATTGTGG AGGCTAATAC TAGTGGGGAT 420
GTTAGGGGTA AACAGGCTGC TAGGGAGACT GATGCAGATG GATTAACTAG AGACCATGCT 480
GAGCTGGATT CAACAGTTAA ACCTGTAATT TCTAGGTTTC GAGATAGAAT TAGGATTAAT 540
ATAGGGGGAA TGACATCAAG AGCGGAGATT AAAGGTATTA GGAGGGACTT AGCGGGTGAA 600
CTTGATCAGG TTAGGAGTTT AGTTACAGAG CTTGAAGCTA AGCAGATTCA GCTGACCGCA 660
CATGATACAA ATACTAATGG TGGTTCTAAT AATGTTGGTA GGATACCCTC CGTTCCTAGT 720
GGTGCTGTTA ATTCTTATAG TCAACCACGA TATATCGATA ATGGTGTGAT GAATAGTAGG 780
GCTTTAGTGC GAGCGAATTC AGAGATGGAT TTGGTGGGGC ACCCTAGATC GAGACCATTC 840
CAGCGACCAA GGGTTGCAGT TGTGGAAAAC AATAATGTAG CTGCTGAATT TGTGGAGAAG 900
GAGAAGAGGA CCCCGAAGGC CAATCAGTAC TACACTAATT CCGAATTCTT ACTTGCGAAG 960
GATAGATTGC CTCCGGAAAG CAATAAGAAA TTTAAGCCAA ATGGTGCTGG GAGGAAACAC 1020
AATGGTGAGT TGGAGCAGGG GTATCCATTT GGTGTTGGCT TTGGGTTTGA TAAACATAGG 1080
AATCAGGTGT TTAAGAGATG CACCACCCTG CTTCAGAGGT TAATGAAGCA CAAGCATGGG 1140
TGGGTGTTTA ATGAGCCAGT GAATGTGGAG CGTCTGGGGC TGCATGATTA TCATGCTATC 1200
ATCAAGCATC CTATGGATTT GGGCACTATC AAAGCTAGGC TATCTCAAAA TTGGTACAAG 1260
TCCCCCAGGG AGTTTGCTGA GGATGTGAGA CTTGTCTTTC ATAATGCCAT GACTTATAAT 1320
CCCAAAGGAC ATGATGTTCA TCTTATGTCG GAACAGTTGT TAAAGATTTT TGAAGACAGG 1380
TGGGCAGTTA TAGAGGCAGA GTTTAATCCG GATTGGAGGT ATCAAATGTA TCATGATGCA 1440
GGTTTGCCTA CCCCCGCTTC AAGAAAGGTC CCTCAGCCTT CTCCCTTTGC CCGTGCTTCT 1500
GTAACTTCTC ATCCACCTGC TTCTCAAGCA AGGGCTTTGG AAAGGTCTGA GTTAATGACT 1560
GAACCAGCTG ATTTCAGGTT CAAGCCATCA CGCGTTGCTC ATGTCGGTAG GGTACCAGTT 1620
CCTAAGAAAC CTAAAGCAAA TGATCCCAAT AAAAGGGATA TGACCTATGA AGAAAAACAG 1680
AGACTCAGCA CACATCTCCA GAGCTTACCT TTAGAAAAGC TTGATGCTGT TGTTCAGATT 1740
ATTAAGAAGA GGAACTCAAC ATTTTATCAA AATGGTGATG AGATTGAAGT AGATATAGAC 1800
AGTGTTGATG TGGAAAGCCT CTGGGAGCTT GAAAGGTTTG TGACCAATTA CAAAAAGAAC 1860
TTAAGCAAGC AGAAGAGAAA GACTGAACTT GCTCAGCAAG CCAGACGAAC TGCAAGGACT 1920
GCCCCAGTCA TGAATTCTGC TCCGATGGTT GCTGGTGCAC CGAACAGTAA TACTGAAGCG 1980
GGAAGACAGA TGGATAATGC AAGTAGGTCT AGTAGTTCAA GCAGTTCCAG CAGCGATTCA 2040
GGTTCATCCT CAAGTGATTC TGATAGCGAT AGTTCCTCTG GATCCGGATC AGAGGGGGGG 2100
CATTGA 2107
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sot-0042 PGSC0003DMT400039787 Solanum tuberosum 89 0.0 1130
WERAM-Pot-0170 POPTR_0019s12050.1 Populus trichocarpa 53 1e-118 425
WERAM-Viv-0072 VIT_12s0028g02510.t01 Vitis vinifera 50 2e-118 423
WERAM-Thc-0011 EOX94205 Theobroma cacao 53 2e-115 414
WERAM-Prp-0041 EMJ12560 Prunus persica 54 3e-115 413
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 55 1e-111 401
WERAM-Met-0054 KEH39252 Medicago truncatula 52 5e-109 392
WERAM-Amt-0025 ERN13953 Amborella trichopoda 49 8e-105 379
WERAM-Brr-0152 Bra030643.1-P Brassica rapa 47 4e-91 333
WERAM-Bro-0142 Bo8g006010.1 Brassica oleracea 44 1e-90 332
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 48 5e-90 329
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 47 6e-88 322
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 58 5e-81 300
WERAM-Zem-0006 GRMZM2G004741_P01 Zea mays 46 2e-79 295
WERAM-Sob-0069 Sb04g009080.1 Sorghum bicolor 46 5e-79 293
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 45 2e-78 291
WERAM-Sei-0066 Si016549m Setaria italica 46 8e-78 289
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 44 8e-78 289
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 45 1e-77 288
WERAM-Brd-0069 BRADI3G09460.1 Brachypodium distachyon 45 3e-77 287
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 52 1e-75 281
WERAM-Aet-0072 EMT26738 Aegilops tauschii 50 9e-74 275
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 57 2e-71 268
WERAM-Orb-0022 OBART02G10710.1 Oryza barthii 52 2e-71 268
WERAM-Org-0022 ORGLA02G0096900.1 Oryza glaberrima 52 2e-71 268
WERAM-Orni-0021 ONIVA02G11900.1 Oryza nivara 52 2e-71 267
WERAM-Orm-0024 OMERI02G11670.1 Oryza meridionalis 52 3e-71 267
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 52 4e-71 266
WERAM-Orr-0021 ORUFI02G10640.1 Oryza rufipogon 52 4e-71 266
WERAM-Orl-0110 KN542696.1_FGP001 Oryza longistaminata 52 4e-71 266
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 57 5e-71 266
WERAM-Ori-0024 BGIOSGA007894-PA Oryza indica 52 6e-71 266
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 57 3e-70 264
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 45 1e-60 231
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 40 1e-50 198
WERAM-Orn-0042 ENSONIP00000004818.1 Oreochromis niloticus 36 2e-26 118
Created Date 25-Jun-2016