WERAM Information

Tag Content
WERAM ID WERAM-Bro-0142
Ensembl Protein ID Bo8g006010.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo8g006010 Bo8g006010.1 Bo8g006010.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 2.70e-23 83.3 421 491
Organism Brassica oleracea
Domain Profile
  Ac_Reader Bromodomain
     BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssv 71 
                   +h++ ++F+ pvd + l ++dY+ ii++PmdL t+k+ l ++ Y+sp ef++Dvrl f+Na++yn+++++v
  Bo8g006010.1 421 KHKHGWVFNAPVDVKgLGLHDYFAIIEHPMDLGTVKSALANNLYKSPREFAEDVRLTFHNAMTYNPPGQDV 491
                   799****************************************************************9987 PP
Protein Sequence
(Fasta)		MASEPVNGEG TDGAREKQKI KVYTRKGKGQ RKLSPFFAFD GDSREKPEGD SENNRQSPPQ 60
TLAQESQKSP VSSVATEAPS EKVIDKPLVE ALTQAEPQDD ASLAPTDKNV IQPVSDPLGQ 120
EDVNTVTGDK SVEVPSQSNT GQDDVNTVVV YENSIKESLA QEDVTAMIVD KKAIEAPSQT 180
ISAGDANTVV VDKNPIEVSS DEDVHVVDAD NLIKESQRDA PDAQQPAGVT SDSAQSIHAT 240
ATESMPMEKD VDGRIKMHVP SKSKQEKEEI RKKLEDQLNV VRDLVKKIED KEGEIGAYND 300
SRLLASTDIN NGGGRILPGL ASGGLPREVI RTPRHLNQLS ISVLENTQGV NEHVEKEKRT 360
PKANQFYRTS EFLLGDKLPP AESNKKSKSS AKKHGGEAGH GFSAGSKVFK NCSALLERLM 420
KHKHGWVFNA PVDVKGLGLH DYFAIIEHPM DLGTVKSALA NNLYKSPREF AEDVRLTFHN 480
AMTYNPPGQD VHIMAEVLLQ MFEERWAVIE ADYNRQLRFA AGYEMNLPAS TMRSRLGPTM 540
PPPPISVSNT MDWSGLPSDL QHPKPTTTPG RTPTSARTPA LKKPKANEPN KRDMTYEEKQ 600
KLSGQLQNLP PEKLDAIVQI VNKRNTAVKL RDEEIEVDID SVDPETLWEL DRFVTNYKKG 660
LSKKKRRAEL AIQAKAEAER NSQKQMAPAP VAHEFSREGG NTAKKTLPTQ VPSQVDKQNN 720
ETSRSSSSSS SSSSSSSSSG KEMVRMLSHL RPFPTNSLSR SLTVLSFSPT QQHKLWSGLD 780
TWRNSPINDL RLWGPNGPLL PSSNSTSSTS HGLVSAAPSL ADLGALVLST PDPLSKSHIS 840
HLAFSRWRRD NNLPVPTNEV PSPKDSDLPL NAYMLHNLAH IELNAIDLAW DTVARFSPFF 900
DVLGRRFFDD FAHVADDESR HFMWCSQRLA ELGFKYGDIP ANNLLMRECE NTSKNVAARL 960
AVIPLVQEAR GLDAGPRLVK RLMGFGDHRT SNIVAKIAEE EIAHVAVGVD WFLSVCQKMN 1020
RAPCPTFKDL IKEYGAELRG PFNHSAREIA GIPRDWYDPS CGTEVDEGSN KQGDKEQLSA 1080
VYDRLTHIIS MESENSSLER PSRA 1104
Nucleotide Sequence
(Fasta)		ATGGCTTCAG AGCCTGTTAA CGGAGAAGGA ACCGATGGGG CGAGAGAGAA GCAAAAGATT 60
AAAGTTTATA CGAGAAAAGG TAAAGGTCAG AGGAAACTGT CTCCGTTCTT CGCCTTTGAC 120
GGTGATAGCC GCGAGAAACC AGAGGGGGAT TCAGAAAACA ATCGTCAGAG TCCTCCTCAA 180
ACTCTAGCTC AAGAGTCTCA GAAGAGTCCT GTGTCCAGTG TAGCTACTGA AGCACCTTCT 240
GAGAAGGTGA TTGACAAGCC TCTTGTGGAA GCATTGACTC AAGCAGAACC TCAGGATGAT 300
GCTAGTTTGG CCCCTACTGA TAAGAACGTT ATTCAACCTG TCTCTGATCC TTTGGGTCAA 360
GAAGATGTGA ACACTGTTAC AGGAGACAAG TCTGTGGAAG TACCTTCTCA AAGCAATACA 420
GGTCAAGATG ATGTCAATAC AGTGGTTGTT TATGAGAACT CTATCAAGGA AAGCCTTGCT 480
CAAGAAGATG TTACTGCCAT GATTGTTGAC AAGAAGGCTA TTGAAGCACC TTCTCAGACC 540
ATATCCGCGG GAGATGCCAA TACTGTTGTT GTTGACAAGA ATCCCATTGA AGTGTCTTCT 600
GATGAAGATG TCCACGTGGT AGATGCAGAT AACCTAATAA AAGAATCTCA AAGAGATGCC 660
CCTGATGCCC AGCAGCCAGC AGGGGTTACA TCTGATTCTG CTCAGAGCAT CCACGCTACT 720
GCTACCGAAA GCATGCCAAT GGAGAAGGAC GTAGATGGAC GCATAAAGAT GCATGTACCC 780
TCCAAGTCAA AGCAAGAGAA AGAGGAGATC AGGAAAAAGC TTGAAGACCA GCTTAACGTG 840
GTCAGAGATC TGGTAAAGAA GATAGAGGAC AAAGAGGGGG AGATTGGTGC GTATAACGAC 900
TCTCGCCTTT TGGCTAGCAC TGATATTAAT AACGGAGGAG GAAGGATCCT TCCAGGGTTG 960
GCATCTGGTG GACTTCCGCG TGAGGTCATT AGAACACCAA GGCATTTAAA TCAACTAAGT 1020
ATATCAGTGT TGGAGAATAC TCAAGGAGTC AATGAGCATG TGGAGAAAGA GAAGAGAACA 1080
CCCAAGGCAA ATCAGTTTTA TAGAACTTCG GAGTTTTTAC TTGGTGACAA GCTGCCACCC 1140
GCAGAGAGTA ACAAGAAATC AAAATCAAGC GCAAAGAAGC ACGGAGGGGA GGCTGGGCAT 1200
GGTTTTAGTG CAGGCTCTAA AGTTTTCAAG AATTGCAGTG CTCTACTAGA GAGGCTGATG 1260
AAGCATAAAC ATGGTTGGGT GTTCAATGCT CCTGTAGATG TGAAGGGTCT TGGTTTGCAT 1320
GATTACTTCG CCATTATCGA ACACCCTATG GATTTGGGAA CGGTCAAGTC TGCGTTGGCA 1380
AATAATCTGT ACAAGTCGCC AAGAGAGTTT GCAGAGGATG TTAGGCTTAC TTTCCACAAT 1440
GCCATGACAT ACAACCCACC AGGACAAGAT GTCCATATAA TGGCGGAAGT GCTGTTACAG 1500
ATGTTTGAGG AGAGGTGGGC TGTGATAGAG GCAGATTATA ATCGTCAGCT GAGATTTGCC 1560
GCTGGTTATG AGATGAATCT TCCAGCTTCT ACAATGAGGT CTAGATTGGG TCCTACAATG 1620
CCGCCGCCGC CCATCAGTGT GAGTAATACA ATGGACTGGA GTGGTCTCCC TTCTGACTTG 1680
CAGCACCCAA AACCAACAAC AACGCCTGGC AGAACACCGA CCAGTGCAAG GACCCCTGCT 1740
CTGAAGAAGC CAAAGGCGAA CGAACCGAAT AAAAGAGATA TGACGTATGA AGAGAAGCAG 1800
AAGCTTAGTG GCCAGTTGCA GAATCTGCCT CCAGAGAAAC TAGATGCGAT TGTGCAGATT 1860
GTTAACAAAA GGAACACTGC TGTGAAGCTA CGGGATGAAG AGATTGAAGT CGATATTGAT 1920
AGTGTTGATC CGGAGACCCT GTGGGAGCTG GACAGATTTG TAACCAACTA CAAAAAGGGA 1980
TTGAGCAAGA AGAAGAGAAG AGCTGAGCTA GCCATTCAAG CTAAAGCAGA AGCTGAGAGA 2040
AATAGCCAGA AACAGATGGC TCCTGCACCG GTGGCACATG AGTTTTCTAG GGAGGGTGGC 2100
AACACAGCTA AAAAGACGCT CCCTACACAA GTACCTTCTC AAGTGGACAA ACAAAACAAT 2160
GAGACGAGCA GATCAAGTAG TTCAAGCAGC TCTTCCAGTA GTTCCAGCTC TTCTAGTGGG 2220
AAGGAAATGG TTAGAATGTT GAGTCATCTC CGTCCCTTTC CGACCAATTC TCTGTCTCGT 2280
TCTCTCACTG TTCTCTCTTT TTCCCCGACA CAGCAACACA AACTCTGGTC TGGTCTCGAC 2340
ACCTGGAGAA ACAGCCCCAT CAACGACCTC CGTCTCTGGG GTCCCAACGG CCCTCTCCTC 2400
CCTTCCTCTA ACTCCACCTC ATCCACCTCC CACGGCCTAG TCTCCGCAGC CCCTTCCCTC 2460
GCCGACCTCG GAGCTCTCGT CCTCTCAACC CCCGACCCTC TCTCCAAATC CCACATCTCA 2520
CACTTAGCTT TCTCCCGTTG GCGCCGTGAC AACAATCTCC CCGTTCCGAC CAACGAAGTC 2580
CCAAGTCCGA AAGACTCTGA CCTTCCTCTC AACGCCTATA TGCTTCACAA CCTCGCTCAC 2640
ATCGAGCTCA ACGCTATTGA CTTGGCGTGG GACACTGTCG CTCGCTTCTC CCCTTTCTTC 2700
GACGTTTTGG GACGCAGGTT CTTCGATGAC TTCGCTCATG TTGCTGATGA TGAGAGTCGG 2760
CACTTCATGT GGTGTTCTCA GAGACTCGCT GAGCTTGGTT TCAAGTATGG AGATATTCCG 2820
GCTAATAATT TGCTGATGAG GGAATGCGAG AACACATCTA AGAATGTCGC TGCTCGGTTA 2880
GCTGTTATCC CTCTTGTTCA GGAGGCTAGA GGGCTTGATG CTGGACCTAG GTTGGTCAAA 2940
AGGCTGATGG GATTTGGAGA TCACAGGACT TCGAATATTG TGGCTAAGAT TGCTGAGGAG 3000
GAAATTGCAC ATGTAGCTGT TGGTGTAGAC TGGTTTCTCT CTGTTTGTCA AAAGATGAAC 3060
CGTGCTCCTT GCCCTACTTT TAAAGATTTG ATCAAAGAGT ATGGTGCTGA GTTAAGAGGA 3120
CCTTTTAACC ATTCAGCTCG GGAGATAGCT GGCATTCCGC GAGATTGGTA TGATCCCTCA 3180
TGTGGCACCG AAGTTGATGA AGGCAGCAAC AAACAGGGTG ACAAGGAGCA ACTTTCTGCG 3240
GTGTACGACA GGCTCACTCA CATAATCTCA ATGGAGAGTG AGAACTCAAG TCTCGAAAGA 3300
CCATCCAGGG CGTAA 3316
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0152 Bra030643.1-P Brassica rapa 92 0.0 1203
WERAM-Art-0006 AT1G06230.3 Arabidopsis thaliana 74 0.0 953
WERAM-Arl-0016 fgenesh1_pg.C_scaffold_1000493 Arabidopsis lyrata 74 0.0 949
WERAM-Thc-0011 EOX94205 Theobroma cacao 59 4e-141 500
WERAM-Pot-0139 POPTR_0013s12320.1 Populus trichocarpa 58 1e-134 478
WERAM-Glm-0152 GLYMA12G33670.1 Glycine max 61 1e-130 465
WERAM-Met-0054 KEH39252 Medicago truncatula 58 4e-125 447
WERAM-Prp-0041 EMJ12560 Prunus persica 58 4e-124 443
WERAM-Viv-0072 VIT_12s0028g02510.t01 Vitis vinifera 58 4e-122 437
WERAM-Sot-0029 PGSC0003DMT400027384 Solanum tuberosum 55 1e-108 392
WERAM-Amt-0025 ERN13953 Amborella trichopoda 53 5e-104 376
WERAM-Orp-0002 OPUNC01G06960.1 Oryza punctata 59 7e-97 353
WERAM-Sol-0098 Solyc07g062660.2.1 Solanum lycopersicum 45 1e-96 352
WERAM-Orr-0002 ORUFI01G07810.1 Oryza rufipogon 60 2e-96 351
WERAM-Orb-0001 OBART01G07260.1 Oryza barthii 60 7e-96 350
WERAM-Orni-0061 ONIVA06G15770.1 Oryza nivara 59 8e-96 349
WERAM-Zem-0006 GRMZM2G004741_P01 Zea mays 49 4e-77 287
WERAM-Sob-0069 Sb04g009080.1 Sorghum bicolor 50 8e-77 286
WERAM-Sei-0047 Si013421m Setaria italica 47 9e-77 286
WERAM-Lep-0026 LPERR02G09080.1 Leersia perrieri 43 1e-75 282
WERAM-Mua-0105 GSMUA_Achr7P09350_001 Musa acuminata 56 7e-75 280
WERAM-Hov-0110 MLOC_78113.1 Hordeum vulgare 42 1e-74 279
WERAM-Tra-0252 Traes_6AS_5C6CBFDEF.2 Triticum aestivum 44 6e-74 276
WERAM-Tru-0072 TRIUR3_27288-P1 Triticum urartu 52 6e-73 273
WERAM-Aet-0072 EMT26738 Aegilops tauschii 52 1e-72 272
WERAM-Brd-0069 BRADI3G09460.1 Brachypodium distachyon 52 3e-72 271
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 57 4e-68 257
WERAM-Ori-0009 BGIOSGA002990-PA Oryza indica 55 3e-67 254
WERAM-Org-0002 ORGLA01G0062500.1 Oryza glaberrima 56 3e-67 254
WERAM-Orm-0003 OMERI01G07220.1 Oryza meridionalis 55 9e-67 253
WERAM-Orbr-0003 OB01G17270.1 Oryza brachyantha 56 2e-66 251
WERAM-Orl-0094 KN540424.1_FGP004 Oryza longistaminata 50 2e-60 231
WERAM-Php-0015 PP1S13_29V6.1 Physcomitrella patens 37 5e-57 221
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 42 4e-51 201
WERAM-Sem-0069 EFJ33224 Selaginella moellendorffii 38 1e-45 182
Created Date 25-Jun-2016